Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 RNU6-31P-201ENST00000384388 108 ntBASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 Y_RNA.488-201ENST00000384403 102 ntBASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 RNU6-748P-201ENST00000384648 107 ntBASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 MIR1468-201ENST00000410600 86 ntBASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 NDUFA5P10-201ENST00000432147 357 ntBASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 AC104689.1-201ENST00000473356 768 ntBASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 RNU5A-7P-201ENST00000515979 116 ntBASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 MIR4305-201ENST00000583252 102 ntBASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 AL355877.2-201ENST00000603670 358 ntBASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 RNU5D-1-201ENST00000363299 116 ntBASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 Y_RNA.185-201ENST00000363894 100 ntBASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 RNU6-923P-201ENST00000364753 107 ntBASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 BTF3L4P2-201ENST00000392798 346 ntBASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 AC013410.2-201ENST00000422627 201 ntBASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 GTF2IP20-201ENST00000431663 360 ntBASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 AL096803.2-201ENST00000450032 677 ntBASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 CR383656.7-201ENST00000548164 174 ntBASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 POLR2KP1-201ENST00000553226 168 ntBASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 MTCYBP27-201ENST00000555160 670 ntBASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 AC136932.1-201ENST00000574771 208 ntBASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 RNU6-1305P-201ENST00000364353 104 ntBASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 RNA5SP240-201ENST00000365355 128 ntBASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 RNU6-39P-201ENST00000384344 107 ntBASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 RPS27P16-201ENST00000425758 201 ntBASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 AC093106.2-201ENST00000428212 385 ntBASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 RPS20P24-201ENST00000457473 361 ntBASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 RNU6-1095P-201ENST00000516148 108 ntBASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 RNU4-77P-201ENST00000516692 156 ntBASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 AC007151.1-201ENST00000572774 483 ntBASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 BNIP3P25-201ENST00000596023 559 ntBASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 AC068620.3-201ENST00000602749 560 ntBASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 AC013468.1-201ENST00000608680 598 ntBASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 AC084824.5-201ENST00000612009 413 ntBASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 Y_RNA.132-201ENST00000363421 102 ntBASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 RNY3-201ENST00000365484 102 ntBASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 SNORA40.19-201ENST00000390846 128 ntBASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 RNU1-119P-201ENST00000391122 165 ntBASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 PRRC2CP1-201ENST00000404428 159 ntBASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 FGF7P5-201ENST00000441829 291 ntBASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 BUD31P2-201ENST00000449374 300 ntBASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 AC079140.2-201ENST00000506193 142 ntBASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 AC007834.2-201ENST00000536310 343 ntBASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 MIR4765-201ENST00000585007 77 ntBASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 AC105224.1-201ENST00000587055 421 ntBASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 AC243960.4-201ENST00000600532 288 ntBASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 AC083865.1-201ENST00000636634 831 ntBASIC0.38□□□□□ -2.35
CSPG4Q6UVK1 RNU6-1187P-201ENST00000364771 110 ntBASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 AC023141.4-201ENST00000412031 328 ntBASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 AC096920.1-201ENST00000423991 241 ntBASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 AC104164.3-201ENST00000467363 1258 ntBASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 AC090888.1-201ENST00000561335 1141 ntBASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 NIFKP6-201ENST00000598115 845 ntBASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 AC025588.3-201ENST00000604182 274 ntBASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 MTND5P30-201ENST00000452896 1731 ntBASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 CYP2C59P-201ENST00000457790 269 ntBASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms