Protein–RNA interactions for Protein: Q5VIR6

VPS53, Vacuolar protein sorting-associated protein 53 homolog, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53Q5VIR6 AC006445.1-201ENST00000491925 405 ntBASIC3.76□□□□□ -1.81
VPS53Q5VIR6 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS53Q5VIR6 SNORD59.2-201ENST00000516873 68 ntBASIC3.76□□□□□ -1.81
VPS53Q5VIR6 RNU6-677P-201ENST00000516914 101 ntBASIC3.76□□□□□ -1.81
VPS53Q5VIR6 SNORA70.24-201ENST00000517233 118 ntBASIC3.76□□□□□ -1.81
VPS53Q5VIR6 AC245166.1-201ENST00000521012 253 ntBASIC3.76□□□□□ -1.81
VPS53Q5VIR6 AC093027.1-201ENST00000546698 429 ntBASIC3.76□□□□□ -1.81
VPS53Q5VIR6 MIR5583-1-201ENST00000580941 59 ntBASIC3.76□□□□□ -1.81
VPS53Q5VIR6 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS53Q5VIR6 AC012493.2-201ENST00000595083 291 ntBASIC3.76□□□□□ -1.81
VPS53Q5VIR6 BNIP3P25-201ENST00000596023 559 ntBASIC3.76□□□□□ -1.81
VPS53Q5VIR6 AL138889.2-201ENST00000603883 242 ntBASIC3.76□□□□□ -1.81
VPS53Q5VIR6 AC007619.2-201ENST00000605743 379 ntBASIC3.76□□□□□ -1.81
VPS53Q5VIR6 AC135507.2-201ENST00000612443 309 ntBASIC3.76□□□□□ -1.81
VPS53Q5VIR6 AC007742.2-201ENST00000618226 398 ntBASIC3.76□□□□□ -1.81
VPS53Q5VIR6 AC090574.1-201ENST00000623186 233 ntBASIC3.76□□□□□ -1.81
VPS53Q5VIR6 AC027309.3-201ENST00000623419 351 ntBASIC3.76□□□□□ -1.81
VPS53Q5VIR6 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.76□□□□□ -1.81
VPS53Q5VIR6 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS53Q5VIR6 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.76□□□□□ -1.81
VPS53Q5VIR6 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS53Q5VIR6 FAM35BP-202ENST00000497389 3337 ntBASIC3.75□□□□□ -1.81
VPS53Q5VIR6 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
VPS53Q5VIR6 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VPS53Q5VIR6 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS53Q5VIR6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS53Q5VIR6 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS53Q5VIR6 Y_RNA.184-201ENST00000363884 108 ntBASIC3.75□□□□□ -1.81
VPS53Q5VIR6 RNU6-116P-201ENST00000384042 109 ntBASIC3.75□□□□□ -1.81
VPS53Q5VIR6 RNU6-190P-201ENST00000384154 102 ntBASIC3.75□□□□□ -1.81
VPS53Q5VIR6 SNORA54-201ENST00000384281 123 ntBASIC3.75□□□□□ -1.81
VPS53Q5VIR6 RNU6-1127P-201ENST00000384580 107 ntBASIC3.75□□□□□ -1.81
VPS53Q5VIR6 RNU6-14P-201ENST00000384630 106 ntBASIC3.75□□□□□ -1.81
VPS53Q5VIR6 RNU4-47P-201ENST00000410876 114 ntBASIC3.75□□□□□ -1.81
VPS53Q5VIR6 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS53Q5VIR6 AC092573.2-201ENST00000434546 243 ntBASIC3.75□□□□□ -1.81
VPS53Q5VIR6 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS53Q5VIR6 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS53Q5VIR6 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS53Q5VIR6 HMGN1P13-201ENST00000505795 138 ntBASIC3.75□□□□□ -1.81
VPS53Q5VIR6 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS53Q5VIR6 RN7SKP57-201ENST00000517248 293 ntBASIC3.75□□□□□ -1.81
VPS53Q5VIR6 AC093331.1-201ENST00000521474 169 ntBASIC3.75□□□□□ -1.81
VPS53Q5VIR6 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS53Q5VIR6 OR11H5P-201ENST00000554039 926 ntBASIC3.75□□□□□ -1.81
VPS53Q5VIR6 AL355375.2-201ENST00000574825 175 ntBASIC3.75□□□□□ -1.81
VPS53Q5VIR6 AL161756.2-201ENST00000604597 246 ntBASIC3.75□□□□□ -1.81
VPS53Q5VIR6 AL050343.2-201ENST00000607338 280 ntBASIC3.75□□□□□ -1.81
VPS53Q5VIR6 AC104237.2-201ENST00000612456 443 ntBASIC3.75□□□□□ -1.81
VPS53Q5VIR6 AL359547.2-201ENST00000615810 418 ntBASIC3.75□□□□□ -1.81
VPS53Q5VIR6 AC090132.2-201ENST00000615881 347 ntBASIC3.75□□□□□ -1.81
VPS53Q5VIR6 MIR8057-201ENST00000620957 69 ntBASIC3.75□□□□□ -1.81
VPS53Q5VIR6 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.75□□□□□ -1.81
VPS53Q5VIR6 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS53Q5VIR6 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS53Q5VIR6 MTND5P42-201ENST00000637720 498 ntBASIC3.75□□□□□ -1.81
VPS53Q5VIR6 MIR1302-1-201ENST00000637932 143 ntBASIC3.75□□□□□ -1.81
VPS53Q5VIR6 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS53Q5VIR6 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS53Q5VIR6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS53Q5VIR6 AC073346.2-201ENST00000624724 2058 ntBASIC3.74□□□□□ -1.81
VPS53Q5VIR6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
VPS53Q5VIR6 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS53Q5VIR6 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS53Q5VIR6 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS53Q5VIR6 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS53Q5VIR6 Y_RNA.474-201ENST00000384341 102 ntBASIC3.74□□□□□ -1.81
VPS53Q5VIR6 SNORD67-201ENST00000390833 111 ntBASIC3.74□□□□□ -1.81
VPS53Q5VIR6 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.74□□□□□ -1.81
VPS53Q5VIR6 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.74□□□□□ -1.81
VPS53Q5VIR6 POLHP1-201ENST00000411806 470 ntBASIC3.74□□□□□ -1.81
VPS53Q5VIR6 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS53Q5VIR6 AL591704.1-201ENST00000432574 275 ntBASIC3.74□□□□□ -1.81
VPS53Q5VIR6 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS53Q5VIR6 RPS3AP12-201ENST00000443616 753 ntBASIC3.74□□□□□ -1.81
VPS53Q5VIR6 PRPS1P1-201ENST00000445305 876 ntBASIC3.74□□□□□ -1.81
VPS53Q5VIR6 AC104058.1-201ENST00000448028 297 ntBASIC3.74□□□□□ -1.81
VPS53Q5VIR6 FABP5P13-201ENST00000452144 328 ntBASIC3.74□□□□□ -1.81
VPS53Q5VIR6 PPP1R2P5-201ENST00000457256 603 ntBASIC3.74□□□□□ -1.81
VPS53Q5VIR6 RNU6-953P-201ENST00000459154 107 ntBASIC3.74□□□□□ -1.81
VPS53Q5VIR6 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS53Q5VIR6 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS53Q5VIR6 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS53Q5VIR6 MTCO3P9-201ENST00000506989 781 ntBASIC3.74□□□□□ -1.81
VPS53Q5VIR6 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.74□□□□□ -1.81
VPS53Q5VIR6 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.74□□□□□ -1.81
VPS53Q5VIR6 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS53Q5VIR6 RNU6-123P-201ENST00000516163 102 ntBASIC3.74□□□□□ -1.81
VPS53Q5VIR6 RNU6-864P-201ENST00000516256 108 ntBASIC3.74□□□□□ -1.81
VPS53Q5VIR6 RNU6-1256P-201ENST00000516539 103 ntBASIC3.74□□□□□ -1.81
VPS53Q5VIR6 IGHV3-76-201ENST00000522465 295 ntBASIC3.74□□□□□ -1.81
VPS53Q5VIR6 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS53Q5VIR6 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS53Q5VIR6 AC026464.5-201ENST00000562497 722 ntBASIC3.74□□□□□ -1.81
VPS53Q5VIR6 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS53Q5VIR6 MIR5195-201ENST00000583555 115 ntBASIC3.74□□□□□ -1.81
VPS53Q5VIR6 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS53Q5VIR6 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS53Q5VIR6 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.74□□□□□ -1.81
VPS53Q5VIR6 AP003400.5-201ENST00000624827 617 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms