Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 MTCO1P44-201ENST00000441935 243 ntBASIC0.08□□□□□ -2.4
VPS13DQ5THJ4 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC0.08□□□□□ -2.4
VPS13DQ5THJ4 ACA64.5-201ENST00000516207 127 ntBASIC0.08□□□□□ -2.4
VPS13DQ5THJ4 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.08□□□□□ -2.4
VPS13DQ5THJ4 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.08□□□□□ -2.4
VPS13DQ5THJ4 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
VPS13DQ5THJ4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 TRIM60P3Y-201ENST00000432201 673 ntBASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 AC023050.2-201ENST00000544968 387 ntBASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 AC240442.1-201ENST00000616055 283 ntBASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 AL356776.1-201ENST00000406574 447 ntBASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 RNA5SP112-201ENST00000515937 99 ntBASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 SNORA31.8-201ENST00000516327 108 ntBASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 RN7SKP287-201ENST00000516546 266 ntBASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 AC113194.1-201ENST00000606037 500 ntBASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 EDDM3CP-201ENST00000415977 425 ntBASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 RPL21P111-201ENST00000418453 477 ntBASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 AP003049.1-201ENST00000529418 457 ntBASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 OR8K4P-201ENST00000534608 872 ntBASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 MIR5093-201ENST00000583199 100 ntBASIC0.07□□□□□ -2.4
VPS13DQ5THJ4 MIR411-201ENST00000362239 96 ntBASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 Y_RNA.572-201ENST00000384757 98 ntBASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 BPY2DP-201ENST00000422208 265 ntBASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 RPL30P11-203ENST00000598995 310 ntBASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 AL021997.1-201ENST00000605757 193 ntBASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 AC004241.3-201ENST00000611728 517 ntBASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 ZNF863P-201ENST00000426746 417 ntBASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 AC021739.1-201ENST00000559631 174 ntBASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 MTCO2P2-201ENST00000591258 225 ntBASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 AL590410.1-201ENST00000617925 333 ntBASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 AC011155.2-201ENST00000623202 216 ntBASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 MIR1295A-201ENST00000408463 79 ntBASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 AC098592.2-201ENST00000413158 265 ntBASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 AC141557.1-201ENST00000540982 400 ntBASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 AC015726.3-201ENST00000624501 418 ntBASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 DBF4P1-201ENST00000412976 1892 ntBASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 Y_RNA.571-201ENST00000384753 98 ntBASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 AC092192.1-201ENST00000633154 1018 ntBASIC0.06□□□□□ -2.4
VPS13DQ5THJ4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.05□□□□□ -2.4
VPS13DQ5THJ4 AC110491.1-201ENST00000562191 2010 ntBASIC0.05□□□□□ -2.4
VPS13DQ5THJ4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
VPS13DQ5THJ4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
VPS13DQ5THJ4 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.05□□□□□ -2.4
VPS13DQ5THJ4 AL365496.1-201ENST00000426885 215 ntBASIC0.05□□□□□ -2.4
VPS13DQ5THJ4 COX7A2P2-201ENST00000505291 250 ntBASIC0.05□□□□□ -2.4
VPS13DQ5THJ4 MTCYBP22-201ENST00000603788 447 ntBASIC0.05□□□□□ -2.4
VPS13DQ5THJ4 AC106900.2-201ENST00000604994 317 ntBASIC0.05□□□□□ -2.4
VPS13DQ5THJ4 AC023934.1-201ENST00000574529 2389 ntBASIC0.05□□□□□ -2.4
VPS13DQ5THJ4 AC245060.5-201ENST00000610778 3293 ntBASIC0.05□□□□□ -2.4
VPS13DQ5THJ4 ZNF680P1-201ENST00000436625 1469 ntBASIC0.05□□□□□ -2.4
VPS13DQ5THJ4 MIR608-201ENST00000384820 100 ntBASIC0.05□□□□□ -2.4
VPS13DQ5THJ4 AC023347.2-201ENST00000433994 462 ntBASIC0.05□□□□□ -2.4
VPS13DQ5THJ4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.05□□□□□ -2.4
VPS13DQ5THJ4 RNA5SP57-201ENST00000459463 123 ntBASIC0.05□□□□□ -2.4
VPS13DQ5THJ4 AC104465.1-201ENST00000611365 139 ntBASIC0.05□□□□□ -2.4
VPS13DQ5THJ4 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC0.05□□□□□ -2.4
VPS13DQ5THJ4 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
VPS13DQ5THJ4 MIR19B1-201ENST00000384829 87 ntBASIC0.05□□□□□ -2.4
VPS13DQ5THJ4 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
VPS13DQ5THJ4 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.05□□□□□ -2.4
VPS13DQ5THJ4 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.05□□□□□ -2.4
VPS13DQ5THJ4 AC245102.2-201ENST00000448956 180 ntBASIC0.05□□□□□ -2.4
VPS13DQ5THJ4 RPL23AP54-201ENST00000495129 419 ntBASIC0.05□□□□□ -2.4
VPS13DQ5THJ4 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
VPS13DQ5THJ4 MIR4768-201ENST00000585270 74 ntBASIC0.05□□□□□ -2.4
VPS13DQ5THJ4 RPL22P18-201ENST00000417197 377 ntBASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 snoU13.19-201ENST00000459148 104 ntBASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 AC108729.1-201ENST00000487812 947 ntBASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 HMGB1P22-201ENST00000505315 124 ntBASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 RNU7-40P-201ENST00000516397 64 ntBASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 RNA5SP134-201ENST00000516492 96 ntBASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 AC090115.3-201ENST00000553218 849 ntBASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 AC090330.1-201ENST00000588646 764 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms