Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SNORD116-14-201ENST00000383894 92 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 SNORD116-17-201ENST00000383929 92 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 RNU6-318P-201ENST00000384283 103 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 SNORD116-15-201ENST00000384445 92 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 SNORD116-20-201ENST00000384529 92 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 RNU6-146P-201ENST00000384602 108 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 SNORD116-19-201ENST00000384729 92 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 AC024067.1-201ENST00000426199 223 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 AL592045.1-201ENST00000429867 352 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC5.48□□□□□ -1.53
RC3H1Q5TC82 RPL35AP15-201ENST00000468042 339 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 AC005840.1-201ENST00000498412 377 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 PDCD5P2-201ENST00000507570 312 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 AK3P2-201ENST00000507976 429 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 APOOP4-201ENST00000513530 597 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 RNU6-840P-201ENST00000517275 65 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 AC091178.1-203ENST00000584586 279 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.48□□□□□ -1.53
RC3H1Q5TC82 AC099669.2-201ENST00000616549 437 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.48□□□□□ -1.53
RC3H1Q5TC82 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
RC3H1Q5TC82 Z95331.1-201ENST00000623075 23112 ntBASIC5.47□□□□□ -1.53
RC3H1Q5TC82 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
RC3H1Q5TC82 AL031595.2-201ENST00000624215 19071 ntBASIC5.47□□□□□ -1.53
RC3H1Q5TC82 AC135776.4-201ENST00000624300 1904 ntBASIC5.47□□□□□ -1.53
RC3H1Q5TC82 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
RC3H1Q5TC82 MIR208A-201ENST00000362287 71 ntBASIC5.47□□□□□ -1.53
RC3H1Q5TC82 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.47□□□□□ -1.53
RC3H1Q5TC82 RNU6ATAC-201ENST00000408749 126 ntBASIC5.47□□□□□ -1.53
RC3H1Q5TC82 RPS20P14-201ENST00000412545 360 ntBASIC5.47□□□□□ -1.53
RC3H1Q5TC82 AL137159.1-201ENST00000452808 512 ntBASIC5.47□□□□□ -1.53
RC3H1Q5TC82 RNA5SP246-201ENST00000458909 119 ntBASIC5.47□□□□□ -1.53
RC3H1Q5TC82 snoU13.30-201ENST00000458951 104 ntBASIC5.47□□□□□ -1.53
RC3H1Q5TC82 RPS4XP22-201ENST00000480755 780 ntBASIC5.47□□□□□ -1.53
RC3H1Q5TC82 HMGB3P16-201ENST00000508037 287 ntBASIC5.47□□□□□ -1.53
RC3H1Q5TC82 RNU4ATAC15P-201ENST00000516415 126 ntBASIC5.47□□□□□ -1.53
RC3H1Q5TC82 RNU6-971P-201ENST00000516920 106 ntBASIC5.47□□□□□ -1.53
RC3H1Q5TC82 RNA5SP170-201ENST00000517150 101 ntBASIC5.47□□□□□ -1.53
RC3H1Q5TC82 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.47□□□□□ -1.53
RC3H1Q5TC82 TGIF1P1-201ENST00000558095 802 ntBASIC5.47□□□□□ -1.53
RC3H1Q5TC82 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.47□□□□□ -1.53
RC3H1Q5TC82 AC060766.3-201ENST00000591442 263 ntBASIC5.47□□□□□ -1.53
RC3H1Q5TC82 AL133393.1-201ENST00000603277 287 ntBASIC5.47□□□□□ -1.53
RC3H1Q5TC82 RPL23AP88-201ENST00000605759 454 ntBASIC5.47□□□□□ -1.53
RC3H1Q5TC82 AC005828.6-201ENST00000606610 232 ntBASIC5.47□□□□□ -1.53
RC3H1Q5TC82 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC5.47□□□□□ -1.53
RC3H1Q5TC82 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.46□□□□□ -1.53
RC3H1Q5TC82 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
RC3H1Q5TC82 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.46□□□□□ -1.53
RC3H1Q5TC82 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.46□□□□□ -1.54
RC3H1Q5TC82 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.46□□□□□ -1.54
RC3H1Q5TC82 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RC3H1Q5TC82 RNA5SP52-201ENST00000362448 134 ntBASIC5.46□□□□□ -1.54
RC3H1Q5TC82 RNU6-653P-201ENST00000363074 106 ntBASIC5.46□□□□□ -1.54
RC3H1Q5TC82 RNU6-395P-201ENST00000365662 106 ntBASIC5.46□□□□□ -1.54
RC3H1Q5TC82 MIR301A-201ENST00000385261 86 ntBASIC5.46□□□□□ -1.54
RC3H1Q5TC82 RPS4XP3-201ENST00000398541 413 ntBASIC5.46□□□□□ -1.54
RC3H1Q5TC82 SNORA74C-2-201ENST00000411179 201 ntBASIC5.46□□□□□ -1.54
RC3H1Q5TC82 RPS29P7-201ENST00000439662 171 ntBASIC5.46□□□□□ -1.54
RC3H1Q5TC82 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.46□□□□□ -1.54
RC3H1Q5TC82 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.46□□□□□ -1.54
RC3H1Q5TC82 AL157871.3-201ENST00000557231 293 ntBASIC5.46□□□□□ -1.54
RC3H1Q5TC82 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC5.46□□□□□ -1.54
RC3H1Q5TC82 MIR548X2-201ENST00000579776 100 ntBASIC5.46□□□□□ -1.54
RC3H1Q5TC82 AC015914.2-201ENST00000618167 288 ntBASIC5.46□□□□□ -1.54
RC3H1Q5TC82 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RC3H1Q5TC82 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
RC3H1Q5TC82 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
RC3H1Q5TC82 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC5.46□□□□□ -1.54
RC3H1Q5TC82 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RC3H1Q5TC82 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
RC3H1Q5TC82 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RC3H1Q5TC82 Y_RNA.23-201ENST00000362496 106 ntBASIC5.45□□□□□ -1.54
RC3H1Q5TC82 RNU1-83P-201ENST00000363426 164 ntBASIC5.45□□□□□ -1.54
RC3H1Q5TC82 RNU4-56P-201ENST00000364700 142 ntBASIC5.45□□□□□ -1.54
RC3H1Q5TC82 RNU4-9P-201ENST00000364951 139 ntBASIC5.45□□□□□ -1.54
RC3H1Q5TC82 RNA5SP151-201ENST00000365632 117 ntBASIC5.45□□□□□ -1.54
RC3H1Q5TC82 RNU1-63P-201ENST00000383902 164 ntBASIC5.45□□□□□ -1.54
RC3H1Q5TC82 LAP3P1-201ENST00000403648 294 ntBASIC5.45□□□□□ -1.54
RC3H1Q5TC82 Z74021.1-201ENST00000423610 407 ntBASIC5.45□□□□□ -1.54
RC3H1Q5TC82 RAB28P5-201ENST00000427490 651 ntBASIC5.45□□□□□ -1.54
RC3H1Q5TC82 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.45□□□□□ -1.54
RC3H1Q5TC82 AL358472.1-201ENST00000431295 329 ntBASIC5.45□□□□□ -1.54
RC3H1Q5TC82 HSPD1P21-201ENST00000436541 245 ntBASIC5.45□□□□□ -1.54
RC3H1Q5TC82 RPS15AP7-201ENST00000439294 405 ntBASIC5.45□□□□□ -1.54
RC3H1Q5TC82 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
RC3H1Q5TC82 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.45□□□□□ -1.54
RC3H1Q5TC82 AC012158.1-204ENST00000483430 465 ntBASIC5.45□□□□□ -1.54
RC3H1Q5TC82 RNA5SP446-201ENST00000515955 82 ntBASIC5.45□□□□□ -1.54
RC3H1Q5TC82 RNU6-143P-201ENST00000516942 93 ntBASIC5.45□□□□□ -1.54
RC3H1Q5TC82 RN7SKP272-201ENST00000516988 232 ntBASIC5.45□□□□□ -1.54
RC3H1Q5TC82 AC008489.1-201ENST00000524271 483 ntBASIC5.45□□□□□ -1.54
RC3H1Q5TC82 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC5.45□□□□□ -1.54
RC3H1Q5TC82 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RC3H1Q5TC82 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.45□□□□□ -1.54
RC3H1Q5TC82 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.45□□□□□ -1.54
RC3H1Q5TC82 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.45□□□□□ -1.54
RC3H1Q5TC82 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
RC3H1Q5TC82 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RC3H1Q5TC82 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms