Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.71□□□□□ -2.3
NUP188Q5SRE5 AC008379.1-201ENST00000463655 464 ntBASIC0.71□□□□□ -2.3
NUP188Q5SRE5 HMGN1P10-201ENST00000474557 553 ntBASIC0.71□□□□□ -2.3
NUP188Q5SRE5 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.71□□□□□ -2.3
NUP188Q5SRE5 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.71□□□□□ -2.3
NUP188Q5SRE5 AC026271.5-201ENST00000577873 130 ntBASIC0.71□□□□□ -2.3
NUP188Q5SRE5 MTCYBP22-201ENST00000603788 447 ntBASIC0.71□□□□□ -2.3
NUP188Q5SRE5 AC002550.2-201ENST00000621246 394 ntBASIC0.71□□□□□ -2.3
NUP188Q5SRE5 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.71□□□□□ -2.3
NUP188Q5SRE5 MTND5P11-201ENST00000511037 1812 ntBASIC0.71□□□□□ -2.3
NUP188Q5SRE5 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.7□□□□□ -2.3
NUP188Q5SRE5 SNORA63.3-201ENST00000362682 132 ntBASIC0.7□□□□□ -2.3
NUP188Q5SRE5 RNU6-217P-201ENST00000384164 104 ntBASIC0.7□□□□□ -2.3
NUP188Q5SRE5 USP9YP19-201ENST00000412165 485 ntBASIC0.7□□□□□ -2.3
NUP188Q5SRE5 USP9YP13-201ENST00000417797 480 ntBASIC0.7□□□□□ -2.3
NUP188Q5SRE5 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.7□□□□□ -2.3
NUP188Q5SRE5 AL049714.1-201ENST00000466686 347 ntBASIC0.7□□□□□ -2.3
NUP188Q5SRE5 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.7□□□□□ -2.3
NUP188Q5SRE5 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.7□□□□□ -2.3
NUP188Q5SRE5 MIR4422-201ENST00000581938 83 ntBASIC0.7□□□□□ -2.3
NUP188Q5SRE5 NIFKP6-201ENST00000598115 845 ntBASIC0.7□□□□□ -2.3
NUP188Q5SRE5 AP000238.1-201ENST00000608759 426 ntBASIC0.7□□□□□ -2.3
NUP188Q5SRE5 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
NUP188Q5SRE5 SNRPEP3-201ENST00000338402 276 ntBASIC0.69□□□□□ -2.3
NUP188Q5SRE5 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.69□□□□□ -2.3
NUP188Q5SRE5 MIR30A-201ENST00000385092 71 ntBASIC0.69□□□□□ -2.3
NUP188Q5SRE5 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.69□□□□□ -2.3
NUP188Q5SRE5 VN1R42P-201ENST00000424651 344 ntBASIC0.69□□□□□ -2.3
NUP188Q5SRE5 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.69□□□□□ -2.3
NUP188Q5SRE5 RPL7P29-201ENST00000437151 728 ntBASIC0.69□□□□□ -2.3
NUP188Q5SRE5 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.69□□□□□ -2.3
NUP188Q5SRE5 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.69□□□□□ -2.3
NUP188Q5SRE5 AC092757.1-201ENST00000467293 467 ntBASIC0.69□□□□□ -2.3
NUP188Q5SRE5 AC138853.1-201ENST00000503549 823 ntBASIC0.69□□□□□ -2.3
NUP188Q5SRE5 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC0.69□□□□□ -2.3
NUP188Q5SRE5 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.69□□□□□ -2.3
NUP188Q5SRE5 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.69□□□□□ -2.3
NUP188Q5SRE5 AL132857.1-201ENST00000555180 708 ntBASIC0.69□□□□□ -2.3
NUP188Q5SRE5 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.69□□□□□ -2.3
NUP188Q5SRE5 AC087588.2-201ENST00000617667 426 ntBASIC0.69□□□□□ -2.3
NUP188Q5SRE5 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.69□□□□□ -2.3
NUP188Q5SRE5 AC073308.1-201ENST00000623696 305 ntBASIC0.69□□□□□ -2.3
NUP188Q5SRE5 RNU2-47P-201ENST00000410649 186 ntBASIC0.69□□□□□ -2.3
NUP188Q5SRE5 RNU6-272P-201ENST00000411028 104 ntBASIC0.69□□□□□ -2.3
NUP188Q5SRE5 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.69□□□□□ -2.3
NUP188Q5SRE5 AL160275.3-201ENST00000423876 471 ntBASIC0.69□□□□□ -2.3
NUP188Q5SRE5 RAC1P7-201ENST00000445367 377 ntBASIC0.69□□□□□ -2.3
NUP188Q5SRE5 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.69□□□□□ -2.3
NUP188Q5SRE5 AP001025.1-201ENST00000486139 332 ntBASIC0.69□□□□□ -2.3
NUP188Q5SRE5 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.69□□□□□ -2.3
NUP188Q5SRE5 RNA5SP404-201ENST00000517118 132 ntBASIC0.69□□□□□ -2.3
NUP188Q5SRE5 AC096720.1-201ENST00000604441 183 ntBASIC0.69□□□□□ -2.3
NUP188Q5SRE5 AC010900.2-201ENST00000604508 210 ntBASIC0.69□□□□□ -2.3
NUP188Q5SRE5 FTX_3.1-201ENST00000610451 147 ntBASIC0.69□□□□□ -2.3
NUP188Q5SRE5 AC068787.1-201ENST00000623908 691 ntBASIC0.69□□□□□ -2.3
NUP188Q5SRE5 AL109659.3-201ENST00000624985 950 ntBASIC0.69□□□□□ -2.3
NUP188Q5SRE5 AC091925.2-201ENST00000625059 256 ntBASIC0.69□□□□□ -2.3
NUP188Q5SRE5 RNU6-1083P-201ENST00000384022 107 ntBASIC0.68□□□□□ -2.3
NUP188Q5SRE5 RNU6-1222P-201ENST00000384615 107 ntBASIC0.68□□□□□ -2.3
NUP188Q5SRE5 MIR92A1-201ENST00000385233 78 ntBASIC0.68□□□□□ -2.3
NUP188Q5SRE5 MIR1290-201ENST00000408735 78 ntBASIC0.68□□□□□ -2.3
NUP188Q5SRE5 RNA5SP25-201ENST00000410815 110 ntBASIC0.68□□□□□ -2.3
NUP188Q5SRE5 AL449283.1-202ENST00000418249 604 ntBASIC0.68□□□□□ -2.3
NUP188Q5SRE5 TAAR7P-201ENST00000436141 242 ntBASIC0.68□□□□□ -2.3
NUP188Q5SRE5 AL354941.1-201ENST00000438600 464 ntBASIC0.68□□□□□ -2.3
NUP188Q5SRE5 AL096803.2-201ENST00000450032 677 ntBASIC0.68□□□□□ -2.3
NUP188Q5SRE5 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.68□□□□□ -2.3
NUP188Q5SRE5 UBL5P1-201ENST00000507979 193 ntBASIC0.68□□□□□ -2.3
NUP188Q5SRE5 SNORD116-30-201ENST00000516468 85 ntBASIC0.68□□□□□ -2.3
NUP188Q5SRE5 AC023158.1-201ENST00000561632 1025 ntBASIC0.68□□□□□ -2.3
NUP188Q5SRE5 AC004817.2-201ENST00000561794 651 ntBASIC0.68□□□□□ -2.3
NUP188Q5SRE5 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.68□□□□□ -2.3
NUP188Q5SRE5 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.68□□□□□ -2.3
NUP188Q5SRE5 AC008498.1-201ENST00000613012 531 ntBASIC0.68□□□□□ -2.3
NUP188Q5SRE5 AC090772.4-201ENST00000623599 362 ntBASIC0.68□□□□□ -2.3
NUP188Q5SRE5 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
NUP188Q5SRE5 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.67□□□□□ -2.3
NUP188Q5SRE5 AL512637.2-201ENST00000431287 1256 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 RSU1P2-202ENST00000437884 485 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 AL161788.1-201ENST00000441805 169 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 AC104073.1-201ENST00000451988 151 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 RPL26P9-201ENST00000457466 433 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 HMGB1P36-201ENST00000487709 576 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 RNU6-488P-201ENST00000515918 99 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 SNORA31.22-201ENST00000517204 135 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.67□□□□□ -2.3
NUP188Q5SRE5 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
NUP188Q5SRE5 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.67□□□□□ -2.3
NUP188Q5SRE5 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.67□□□□□ -2.3
NUP188Q5SRE5 AL078605.1-201ENST00000603529 500 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 AL161729.4-201ENST00000604650 476 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 uc_338.14-201ENST00000613162 166 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 AC104763.3-201ENST00000613765 618 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 AP000776.1-201ENST00000530032 1663 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.67□□□□□ -2.3
NUP188Q5SRE5 MTND5P30-201ENST00000452896 1731 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 RNU4-67P-201ENST00000364569 141 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 RNU6-441P-201ENST00000384545 106 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 RPL37P10-201ENST00000412884 288 ntBASIC0.67□□□□□ -2.3
NUP188Q5SRE5 Z99497.1-201ENST00000421282 135 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms