Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 SNORD53-201ENST00000579969 78 ntBASIC2.44□□□□□ -2.02
SRP54P61011 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.44□□□□□ -2.02
SRP54P61011 MIR3945-201ENST00000581853 98 ntBASIC2.44□□□□□ -2.02
SRP54P61011 MIR5092-201ENST00000583139 88 ntBASIC2.44□□□□□ -2.02
SRP54P61011 MIR4658-201ENST00000584344 65 ntBASIC2.44□□□□□ -2.02
SRP54P61011 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.44□□□□□ -2.02
SRP54P61011 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.44□□□□□ -2.02
SRP54P61011 AC069294.1-201ENST00000608397 350 ntBASIC2.44□□□□□ -2.02
SRP54P61011 AC063944.3-201ENST00000609969 533 ntBASIC2.44□□□□□ -2.02
SRP54P61011 AC091304.9-201ENST00000612091 226 ntBASIC2.44□□□□□ -2.02
SRP54P61011 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.44□□□□□ -2.02
SRP54P61011 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.44□□□□□ -2.02
SRP54P61011 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.43□□□□□ -2.02
SRP54P61011 RNA5SP289-201ENST00000362332 137 ntBASIC2.43□□□□□ -2.02
SRP54P61011 RNA5SP456-201ENST00000364002 114 ntBASIC2.43□□□□□ -2.02
SRP54P61011 RNU6-898P-201ENST00000365627 104 ntBASIC2.43□□□□□ -2.02
SRP54P61011 MIR218-1-201ENST00000384999 110 ntBASIC2.43□□□□□ -2.02
SRP54P61011 AC007064.1-201ENST00000412238 351 ntBASIC2.43□□□□□ -2.02
SRP54P61011 AC107081.1-201ENST00000414975 361 ntBASIC2.43□□□□□ -2.02
SRP54P61011 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.43□□□□□ -2.02
SRP54P61011 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.43□□□□□ -2.02
SRP54P61011 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.43□□□□□ -2.02
SRP54P61011 Z82209.1-201ENST00000422141 2135 ntBASIC2.43□□□□□ -2.02
SRP54P61011 RPL30P4-201ENST00000429309 333 ntBASIC2.43□□□□□ -2.02
SRP54P61011 Z98742.2-201ENST00000431564 187 ntBASIC2.43□□□□□ -2.02
SRP54P61011 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.43□□□□□ -2.02
SRP54P61011 AC004383.1-201ENST00000438135 289 ntBASIC2.43□□□□□ -2.02
SRP54P61011 PGBD4P3-201ENST00000440731 581 ntBASIC2.43□□□□□ -2.02
SRP54P61011 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.43□□□□□ -2.02
SRP54P61011 RPL22P13-201ENST00000493291 347 ntBASIC2.43□□□□□ -2.02
SRP54P61011 RN7SL636P-201ENST00000497504 294 ntBASIC2.43□□□□□ -2.02
SRP54P61011 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.43□□□□□ -2.02
SRP54P61011 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.43□□□□□ -2.02
SRP54P61011 AC107222.1-201ENST00000510899 637 ntBASIC2.43□□□□□ -2.02
SRP54P61011 PRELID2P1-201ENST00000552837 301 ntBASIC2.43□□□□□ -2.02
SRP54P61011 MIR5571-201ENST00000577998 113 ntBASIC2.43□□□□□ -2.02
SRP54P61011 AC105245.1-201ENST00000581934 244 ntBASIC2.43□□□□□ -2.02
SRP54P61011 BNIP3P8-201ENST00000597863 560 ntBASIC2.43□□□□□ -2.02
SRP54P61011 AC024581.2-201ENST00000619986 252 ntBASIC2.43□□□□□ -2.02
SRP54P61011 AC244517.12-201ENST00000623581 663 ntBASIC2.43□□□□□ -2.02
SRP54P61011 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SRP54P61011 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
SRP54P61011 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
SRP54P61011 AC103710.2-202ENST00000641454 2853 ntBASIC2.42□□□□□ -2.02
SRP54P61011 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.42□□□□□ -2.02
SRP54P61011 RNU2-39P-201ENST00000410604 198 ntBASIC2.42□□□□□ -2.02
SRP54P61011 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.42□□□□□ -2.02
SRP54P61011 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.42□□□□□ -2.02
SRP54P61011 MTND6P13-201ENST00000443510 523 ntBASIC2.42□□□□□ -2.02
SRP54P61011 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.42□□□□□ -2.02
SRP54P61011 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.42□□□□□ -2.02
SRP54P61011 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.42□□□□□ -2.02
SRP54P61011 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.42□□□□□ -2.02
SRP54P61011 RPS27P27-201ENST00000498779 255 ntBASIC2.42□□□□□ -2.02
SRP54P61011 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.42□□□□□ -2.02
SRP54P61011 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.42□□□□□ -2.02
SRP54P61011 AC117522.1-201ENST00000509821 380 ntBASIC2.42□□□□□ -2.02
SRP54P61011 HMGB3P3-201ENST00000510526 400 ntBASIC2.42□□□□□ -2.02
SRP54P61011 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.42□□□□□ -2.02
SRP54P61011 ADI1P3-201ENST00000549509 470 ntBASIC2.42□□□□□ -2.02
SRP54P61011 AC121758.2-201ENST00000553271 193 ntBASIC2.42□□□□□ -2.02
SRP54P61011 MIR3915-201ENST00000578518 97 ntBASIC2.42□□□□□ -2.02
SRP54P61011 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
SRP54P61011 AL139286.2-201ENST00000606838 396 ntBASIC2.42□□□□□ -2.02
SRP54P61011 AC012409.4-201ENST00000612923 249 ntBASIC2.42□□□□□ -2.02
SRP54P61011 AC024940.5-201ENST00000622889 474 ntBASIC2.42□□□□□ -2.02
SRP54P61011 AC138627.2-201ENST00000624202 601 ntBASIC2.42□□□□□ -2.02
SRP54P61011 AC064859.1-201ENST00000624741 174 ntBASIC2.42□□□□□ -2.02
SRP54P61011 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
SRP54P61011 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.42□□□□□ -2.02
SRP54P61011 AC007336.1-201ENST00000576365 3828 ntBASIC2.41□□□□□ -2.02
SRP54P61011 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SRP54P61011 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SRP54P61011 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.41□□□□□ -2.02
SRP54P61011 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SRP54P61011 SNORA38-201ENST00000363946 132 ntBASIC2.41□□□□□ -2.02
SRP54P61011 RNY1P12-201ENST00000364251 105 ntBASIC2.41□□□□□ -2.02
SRP54P61011 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SRP54P61011 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SRP54P61011 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SRP54P61011 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SRP54P61011 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.41□□□□□ -2.02
SRP54P61011 USP9YP27-201ENST00000418455 438 ntBASIC2.41□□□□□ -2.02
SRP54P61011 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.41□□□□□ -2.02
SRP54P61011 OOSP1P1-201ENST00000423265 274 ntBASIC2.41□□□□□ -2.02
SRP54P61011 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SRP54P61011 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SRP54P61011 AC011753.1-201ENST00000451001 220 ntBASIC2.41□□□□□ -2.02
SRP54P61011 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.41□□□□□ -2.02
SRP54P61011 RAP1BP2-201ENST00000478270 544 ntBASIC2.41□□□□□ -2.02
SRP54P61011 AC018437.1-201ENST00000492214 406 ntBASIC2.41□□□□□ -2.02
SRP54P61011 FAM92A1P2-202ENST00000504766 877 ntBASIC2.41□□□□□ -2.02
SRP54P61011 AC108078.2-201ENST00000510750 236 ntBASIC2.41□□□□□ -2.02
SRP54P61011 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.41□□□□□ -2.02
SRP54P61011 RNA5SP24-201ENST00000516478 95 ntBASIC2.41□□□□□ -2.02
SRP54P61011 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.41□□□□□ -2.02
SRP54P61011 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.41□□□□□ -2.02
SRP54P61011 AC022616.3-201ENST00000523940 148 ntBASIC2.41□□□□□ -2.02
SRP54P61011 MIR3682-201ENST00000581338 84 ntBASIC2.41□□□□□ -2.02
SRP54P61011 MIR548AB-201ENST00000584917 84 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms