Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 TEX21P-201ENST00000447107 1476 ntBASIC1.61□□□□□ -2.15
RAB38P57729 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
RAB38P57729 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
RAB38P57729 AL627390.1-201ENST00000396055 340 ntBASIC1.6□□□□□ -2.15
RAB38P57729 RNA5SP450-201ENST00000411206 102 ntBASIC1.6□□□□□ -2.15
RAB38P57729 AC078974.1-201ENST00000411597 223 ntBASIC1.6□□□□□ -2.15
RAB38P57729 AC127391.1-201ENST00000411737 98 ntBASIC1.6□□□□□ -2.15
RAB38P57729 CYCSP49-201ENST00000420810 319 ntBASIC1.6□□□□□ -2.15
RAB38P57729 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.6□□□□□ -2.15
RAB38P57729 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.6□□□□□ -2.15
RAB38P57729 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.6□□□□□ -2.15
RAB38P57729 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.6□□□□□ -2.15
RAB38P57729 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.6□□□□□ -2.15
RAB38P57729 AP000949.1-201ENST00000438328 629 ntBASIC1.6□□□□□ -2.15
RAB38P57729 NEFMP1-201ENST00000443423 1006 ntBASIC1.6□□□□□ -2.15
RAB38P57729 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.6□□□□□ -2.15
RAB38P57729 AL358794.1-201ENST00000445689 381 ntBASIC1.6□□□□□ -2.15
RAB38P57729 FDX1P2-201ENST00000450769 375 ntBASIC1.6□□□□□ -2.15
RAB38P57729 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.6□□□□□ -2.15
RAB38P57729 RPL39P36-201ENST00000490784 156 ntBASIC1.6□□□□□ -2.15
RAB38P57729 HMGB1P35-201ENST00000503360 598 ntBASIC1.6□□□□□ -2.15
RAB38P57729 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.6□□□□□ -2.15
RAB38P57729 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.6□□□□□ -2.15
RAB38P57729 SNORA25.15-201ENST00000516487 89 ntBASIC1.6□□□□□ -2.15
RAB38P57729 RNU6-572P-201ENST00000516724 80 ntBASIC1.6□□□□□ -2.15
RAB38P57729 SNORA48.11-201ENST00000517015 89 ntBASIC1.6□□□□□ -2.15
RAB38P57729 AC009902.1-201ENST00000519351 183 ntBASIC1.6□□□□□ -2.15
RAB38P57729 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.6□□□□□ -2.15
RAB38P57729 AP000907.2-201ENST00000530827 353 ntBASIC1.6□□□□□ -2.15
RAB38P57729 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.6□□□□□ -2.15
RAB38P57729 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.6□□□□□ -2.15
RAB38P57729 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.6□□□□□ -2.15
RAB38P57729 PSMA3P-201ENST00000555485 635 ntBASIC1.6□□□□□ -2.15
RAB38P57729 MIR4255-201ENST00000579351 72 ntBASIC1.6□□□□□ -2.15
RAB38P57729 AC090897.2-201ENST00000581715 130 ntBASIC1.6□□□□□ -2.15
RAB38P57729 AC005034.5-201ENST00000604219 466 ntBASIC1.6□□□□□ -2.15
RAB38P57729 AC092953.2-201ENST00000608000 699 ntBASIC1.6□□□□□ -2.15
RAB38P57729 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.6□□□□□ -2.15
RAB38P57729 MIR8081-201ENST00000611533 95 ntBASIC1.6□□□□□ -2.15
RAB38P57729 AC017037.3-201ENST00000625016 472 ntBASIC1.6□□□□□ -2.15
RAB38P57729 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.6□□□□□ -2.15
RAB38P57729 AC099654.8-201ENST00000637757 681 ntBASIC1.6□□□□□ -2.15
RAB38P57729 AP000776.1-201ENST00000530032 1663 ntBASIC1.6□□□□□ -2.15
RAB38P57729 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.59□□□□□ -2.15
RAB38P57729 RNU5A-8P-201ENST00000364102 114 ntBASIC1.59□□□□□ -2.15
RAB38P57729 SNORD48-201ENST00000364953 64 ntBASIC1.59□□□□□ -2.15
RAB38P57729 SNORD116.1-201ENST00000365628 92 ntBASIC1.59□□□□□ -2.15
RAB38P57729 RNU6-1000P-201ENST00000391066 106 ntBASIC1.59□□□□□ -2.15
RAB38P57729 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.59□□□□□ -2.15
RAB38P57729 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.59□□□□□ -2.15
RAB38P57729 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.59□□□□□ -2.15
RAB38P57729 EEF1A1P39-201ENST00000440791 250 ntBASIC1.59□□□□□ -2.15
RAB38P57729 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.59□□□□□ -2.15
RAB38P57729 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.59□□□□□ -2.15
RAB38P57729 BTF3P15-201ENST00000455606 336 ntBASIC1.59□□□□□ -2.15
RAB38P57729 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.59□□□□□ -2.15
RAB38P57729 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
RAB38P57729 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.59□□□□□ -2.15
RAB38P57729 AC104982.1-201ENST00000478775 574 ntBASIC1.59□□□□□ -2.15
RAB38P57729 HMGB3P17-201ENST00000504195 649 ntBASIC1.59□□□□□ -2.15
RAB38P57729 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.59□□□□□ -2.15
RAB38P57729 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.59□□□□□ -2.15
RAB38P57729 AC117522.2-201ENST00000510049 657 ntBASIC1.59□□□□□ -2.15
RAB38P57729 AC034114.1-201ENST00000520293 285 ntBASIC1.59□□□□□ -2.15
RAB38P57729 AC084851.1-201ENST00000529105 249 ntBASIC1.59□□□□□ -2.15
RAB38P57729 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.59□□□□□ -2.15
RAB38P57729 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.59□□□□□ -2.15
RAB38P57729 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.59□□□□□ -2.15
RAB38P57729 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.59□□□□□ -2.15
RAB38P57729 MIR3122-201ENST00000577243 73 ntBASIC1.59□□□□□ -2.15
RAB38P57729 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.59□□□□□ -2.15
RAB38P57729 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.59□□□□□ -2.15
RAB38P57729 AC008121.3-201ENST00000618726 433 ntBASIC1.59□□□□□ -2.15
RAB38P57729 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.59□□□□□ -2.15
RAB38P57729 AC138393.1-203ENST00000327086 343 ntBASIC1.58□□□□□ -2.16
RAB38P57729 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
RAB38P57729 U8.14-201ENST00000390843 143 ntBASIC1.58□□□□□ -2.16
RAB38P57729 SNORA40.4-201ENST00000390971 128 ntBASIC1.58□□□□□ -2.16
RAB38P57729 AL591034.2-201ENST00000402839 359 ntBASIC1.58□□□□□ -2.16
RAB38P57729 MTATP6P20-201ENST00000414147 562 ntBASIC1.58□□□□□ -2.16
RAB38P57729 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.58□□□□□ -2.16
RAB38P57729 AL358453.1-201ENST00000422522 250 ntBASIC1.58□□□□□ -2.16
RAB38P57729 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.58□□□□□ -2.16
RAB38P57729 TXNL1P1-201ENST00000429528 554 ntBASIC1.58□□□□□ -2.16
RAB38P57729 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.58□□□□□ -2.16
RAB38P57729 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.58□□□□□ -2.16
RAB38P57729 MTND6P13-201ENST00000443510 523 ntBASIC1.58□□□□□ -2.16
RAB38P57729 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
RAB38P57729 AL136380.1-201ENST00000447970 162 ntBASIC1.58□□□□□ -2.16
RAB38P57729 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.58□□□□□ -2.16
RAB38P57729 AC108059.3-201ENST00000456388 214 ntBASIC1.58□□□□□ -2.16
RAB38P57729 AC018868.1-201ENST00000491307 315 ntBASIC1.58□□□□□ -2.16
RAB38P57729 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RAB38P57729 AC010587.2-201ENST00000511727 448 ntBASIC1.58□□□□□ -2.16
RAB38P57729 MTCYBP43-201ENST00000513621 740 ntBASIC1.58□□□□□ -2.16
RAB38P57729 RNU5B-3P-201ENST00000516601 115 ntBASIC1.58□□□□□ -2.16
RAB38P57729 RNU6-548P-201ENST00000517083 115 ntBASIC1.58□□□□□ -2.16
RAB38P57729 RPS3AP4-201ENST00000555161 764 ntBASIC1.58□□□□□ -2.16
RAB38P57729 MIR3683-201ENST00000580847 82 ntBASIC1.58□□□□□ -2.16
RAB38P57729 AC243960.4-201ENST00000600532 288 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms