Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.66□□□□□ -1.82
PER3P56645 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
PER3P56645 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PER3P56645 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.65□□□□□ -1.82
PER3P56645 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.65□□□□□ -1.83
PER3P56645 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PER3P56645 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PER3P56645 RNU6-890P-201ENST00000384121 107 ntBASIC3.65□□□□□ -1.83
PER3P56645 RNU6-842P-201ENST00000384269 107 ntBASIC3.65□□□□□ -1.83
PER3P56645 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.65□□□□□ -1.83
PER3P56645 RAB9AP3-201ENST00000412737 573 ntBASIC3.65□□□□□ -1.83
PER3P56645 SNORD56-201ENST00000413522 71 ntBASIC3.65□□□□□ -1.83
PER3P56645 AC006011.1-201ENST00000442758 349 ntBASIC3.65□□□□□ -1.83
PER3P56645 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.65□□□□□ -1.83
PER3P56645 FTH1P25-201ENST00000447665 469 ntBASIC3.65□□□□□ -1.83
PER3P56645 RAB9AP1-201ENST00000449393 573 ntBASIC3.65□□□□□ -1.83
PER3P56645 ANP32BP2-201ENST00000454525 545 ntBASIC3.65□□□□□ -1.83
PER3P56645 MIR2053-201ENST00000459295 91 ntBASIC3.65□□□□□ -1.83
PER3P56645 RN7SL93P-201ENST00000463035 293 ntBASIC3.65□□□□□ -1.83
PER3P56645 PPIAP15-201ENST00000479662 484 ntBASIC3.65□□□□□ -1.83
PER3P56645 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.65□□□□□ -1.83
PER3P56645 AC113155.1-201ENST00000511141 769 ntBASIC3.65□□□□□ -1.83
PER3P56645 AC022634.1-201ENST00000520765 532 ntBASIC3.65□□□□□ -1.83
PER3P56645 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.65□□□□□ -1.83
PER3P56645 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.65□□□□□ -1.83
PER3P56645 AC096577.2-201ENST00000611455 153 ntBASIC3.65□□□□□ -1.83
PER3P56645 AL121772.2-201ENST00000614331 297 ntBASIC3.65□□□□□ -1.83
PER3P56645 AC092608.2-201ENST00000624427 218 ntBASIC3.65□□□□□ -1.83
PER3P56645 AL034408.1-202ENST00000636088 415 ntBASIC3.65□□□□□ -1.83
PER3P56645 U2.21-201ENST00000637295 81 ntBASIC3.65□□□□□ -1.83
PER3P56645 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PER3P56645 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
PER3P56645 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PER3P56645 AC118273.1-201ENST00000525324 3006 ntBASIC3.65□□□□□ -1.83
PER3P56645 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PER3P56645 MTND5P30-201ENST00000452896 1731 ntBASIC3.64□□□□□ -1.83
PER3P56645 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PER3P56645 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PER3P56645 Y_RNA.5-201ENST00000362334 102 ntBASIC3.64□□□□□ -1.83
PER3P56645 RNU6-1115P-201ENST00000362490 106 ntBASIC3.64□□□□□ -1.83
PER3P56645 RNU1-18P-201ENST00000363062 164 ntBASIC3.64□□□□□ -1.83
PER3P56645 Y_RNA.112-201ENST00000363250 102 ntBASIC3.64□□□□□ -1.83
PER3P56645 SNORA63C-201ENST00000364578 129 ntBASIC3.64□□□□□ -1.83
PER3P56645 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PER3P56645 SNORA22B-201ENST00000383876 138 ntBASIC3.64□□□□□ -1.83
PER3P56645 RNU6-1040P-201ENST00000383974 107 ntBASIC3.64□□□□□ -1.83
PER3P56645 RNU6-213P-201ENST00000384051 104 ntBASIC3.64□□□□□ -1.83
PER3P56645 SNORA9-201ENST00000384215 133 ntBASIC3.64□□□□□ -1.83
PER3P56645 MIR517A-201ENST00000385001 87 ntBASIC3.64□□□□□ -1.83
PER3P56645 MIR10A-201ENST00000385043 110 ntBASIC3.64□□□□□ -1.83
PER3P56645 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
PER3P56645 AL030996.1-201ENST00000411430 235 ntBASIC3.64□□□□□ -1.83
PER3P56645 SYF2P2-201ENST00000417620 583 ntBASIC3.64□□□□□ -1.83
PER3P56645 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.64□□□□□ -1.83
PER3P56645 RPS15AP6-201ENST00000420703 385 ntBASIC3.64□□□□□ -1.83
PER3P56645 MTND2P23-201ENST00000422990 651 ntBASIC3.64□□□□□ -1.83
PER3P56645 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.64□□□□□ -1.83
PER3P56645 AC098614.2-201ENST00000426040 255 ntBASIC3.64□□□□□ -1.83
PER3P56645 AC007560.1-201ENST00000426912 237 ntBASIC3.64□□□□□ -1.83
PER3P56645 AL159987.2-201ENST00000432754 307 ntBASIC3.64□□□□□ -1.83
PER3P56645 ATP5HP2-201ENST00000433885 485 ntBASIC3.64□□□□□ -1.83
PER3P56645 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.64□□□□□ -1.83
PER3P56645 RNA5SP384-201ENST00000516615 116 ntBASIC3.64□□□□□ -1.83
PER3P56645 RNU6-703P-201ENST00000516946 107 ntBASIC3.64□□□□□ -1.83
PER3P56645 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PER3P56645 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.64□□□□□ -1.83
PER3P56645 TRAV32-201ENST00000553993 340 ntBASIC3.64□□□□□ -1.83
PER3P56645 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.64□□□□□ -1.83
PER3P56645 ZNF192P1-203ENST00000565888 810 ntBASIC3.64□□□□□ -1.83
PER3P56645 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.64□□□□□ -1.83
PER3P56645 MIR5684-201ENST00000585074 65 ntBASIC3.64□□□□□ -1.83
PER3P56645 AL121917.1-203ENST00000605534 577 ntBASIC3.64□□□□□ -1.83
PER3P56645 AC019193.3-201ENST00000609144 554 ntBASIC3.64□□□□□ -1.83
PER3P56645 AC040896.1-201ENST00000613819 479 ntBASIC3.64□□□□□ -1.83
PER3P56645 PISRT1.1-201ENST00000616930 107 ntBASIC3.64□□□□□ -1.83
PER3P56645 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.64□□□□□ -1.83
PER3P56645 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.64□□□□□ -1.83
PER3P56645 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.64□□□□□ -1.83
PER3P56645 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PER3P56645 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
PER3P56645 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PER3P56645 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
PER3P56645 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PER3P56645 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PER3P56645 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
PER3P56645 RNA5SP124-201ENST00000362739 110 ntBASIC3.63□□□□□ -1.83
PER3P56645 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.63□□□□□ -1.83
PER3P56645 SNORA33.2-201ENST00000365413 134 ntBASIC3.63□□□□□ -1.83
PER3P56645 SNORD6-201ENST00000365444 73 ntBASIC3.63□□□□□ -1.83
PER3P56645 RNU6-738P-201ENST00000384531 106 ntBASIC3.63□□□□□ -1.83
PER3P56645 RNU6-331P-201ENST00000384724 107 ntBASIC3.63□□□□□ -1.83
PER3P56645 MIR606-201ENST00000384851 96 ntBASIC3.63□□□□□ -1.83
PER3P56645 MIR634-201ENST00000385208 97 ntBASIC3.63□□□□□ -1.83
PER3P56645 SNORA75.6-201ENST00000391318 127 ntBASIC3.63□□□□□ -1.83
PER3P56645 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.63□□□□□ -1.83
PER3P56645 AL139247.1-201ENST00000422768 325 ntBASIC3.63□□□□□ -1.83
PER3P56645 AC097713.2-201ENST00000430199 356 ntBASIC3.63□□□□□ -1.83
PER3P56645 AC087650.1-201ENST00000431445 468 ntBASIC3.63□□□□□ -1.83
PER3P56645 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.63□□□□□ -1.83
PER3P56645 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms