Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
GFRA1P56159 RPL21P2-201ENST00000440049 481 ntBASIC3.86□□□□□ -1.79
GFRA1P56159 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.86□□□□□ -1.79
GFRA1P56159 FTH1P9-201ENST00000513251 355 ntBASIC3.86□□□□□ -1.79
GFRA1P56159 RNA5SP519-201ENST00000516480 119 ntBASIC3.86□□□□□ -1.79
GFRA1P56159 MRPL49P2-201ENST00000521066 465 ntBASIC3.86□□□□□ -1.79
GFRA1P56159 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.86□□□□□ -1.79
GFRA1P56159 AC006064.5-201ENST00000541782 248 ntBASIC3.86□□□□□ -1.79
GFRA1P56159 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.86□□□□□ -1.79
GFRA1P56159 MYL12BP1-201ENST00000569826 507 ntBASIC3.86□□□□□ -1.79
GFRA1P56159 AL451007.1-201ENST00000595491 289 ntBASIC3.86□□□□□ -1.79
GFRA1P56159 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.86□□□□□ -1.79
GFRA1P56159 MIR8059-201ENST00000620427 81 ntBASIC3.86□□□□□ -1.79
GFRA1P56159 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
GFRA1P56159 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
GFRA1P56159 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
GFRA1P56159 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.86□□□□□ -1.79
GFRA1P56159 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.86□□□□□ -1.79
GFRA1P56159 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.86□□□□□ -1.79
GFRA1P56159 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
GFRA1P56159 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.86□□□□□ -1.79
GFRA1P56159 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
GFRA1P56159 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.85□□□□□ -1.79
GFRA1P56159 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.85□□□□□ -1.79
GFRA1P56159 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
GFRA1P56159 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
GFRA1P56159 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.85□□□□□ -1.79
GFRA1P56159 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
GFRA1P56159 RNU6-858P-201ENST00000362436 107 ntBASIC3.85□□□□□ -1.79
GFRA1P56159 RNU1-20P-201ENST00000363314 162 ntBASIC3.85□□□□□ -1.79
GFRA1P56159 RNU6-1280P-201ENST00000365211 107 ntBASIC3.85□□□□□ -1.79
GFRA1P56159 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.85□□□□□ -1.79
GFRA1P56159 Y_RNA.405-201ENST00000383979 100 ntBASIC3.85□□□□□ -1.79
GFRA1P56159 Y_RNA.451-201ENST00000384200 100 ntBASIC3.85□□□□□ -1.79
GFRA1P56159 SNORA70C-201ENST00000384538 135 ntBASIC3.85□□□□□ -1.79
GFRA1P56159 Y_RNA.524-201ENST00000384564 100 ntBASIC3.85□□□□□ -1.79
GFRA1P56159 Y_RNA.561-201ENST00000384694 100 ntBASIC3.85□□□□□ -1.79
GFRA1P56159 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
GFRA1P56159 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.85□□□□□ -1.79
GFRA1P56159 CBX3P6-201ENST00000430257 527 ntBASIC3.85□□□□□ -1.79
GFRA1P56159 AC108059.2-201ENST00000434626 151 ntBASIC3.85□□□□□ -1.79
GFRA1P56159 DYNLT3P2-201ENST00000442517 295 ntBASIC3.85□□□□□ -1.79
GFRA1P56159 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.85□□□□□ -1.79
GFRA1P56159 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.85□□□□□ -1.79
GFRA1P56159 AC034236.1-201ENST00000469891 373 ntBASIC3.85□□□□□ -1.79
GFRA1P56159 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.85□□□□□ -1.79
GFRA1P56159 AC025884.1-201ENST00000556034 378 ntBASIC3.85□□□□□ -1.79
GFRA1P56159 TVP23BP1-201ENST00000557500 617 ntBASIC3.85□□□□□ -1.79
GFRA1P56159 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.85□□□□□ -1.79
GFRA1P56159 MIR3668-201ENST00000582138 75 ntBASIC3.85□□□□□ -1.79
GFRA1P56159 AC060766.3-201ENST00000591442 263 ntBASIC3.85□□□□□ -1.79
GFRA1P56159 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.85□□□□□ -1.79
GFRA1P56159 RPL23AP78-201ENST00000599928 470 ntBASIC3.85□□□□□ -1.79
GFRA1P56159 MTND4LP5-201ENST00000605152 292 ntBASIC3.85□□□□□ -1.79
GFRA1P56159 AC002076.2-201ENST00000617362 122 ntBASIC3.85□□□□□ -1.79
GFRA1P56159 MIR6076-201ENST00000617521 113 ntBASIC3.85□□□□□ -1.79
GFRA1P56159 AL731566.2-201ENST00000618971 317 ntBASIC3.85□□□□□ -1.79
GFRA1P56159 AL159153.1-201ENST00000619688 317 ntBASIC3.85□□□□□ -1.79
GFRA1P56159 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
GFRA1P56159 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
GFRA1P56159 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
GFRA1P56159 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
GFRA1P56159 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
GFRA1P56159 ADAM3A-203ENST00000461344 2157 ntBASIC3.85□□□□□ -1.79
GFRA1P56159 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.85□□□□□ -1.79
GFRA1P56159 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.85□□□□□ -1.79
GFRA1P56159 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
GFRA1P56159 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.84□□□□□ -1.79
GFRA1P56159 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
GFRA1P56159 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
GFRA1P56159 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
GFRA1P56159 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
GFRA1P56159 RNA5SP28-201ENST00000363841 119 ntBASIC3.84□□□□□ -1.79
GFRA1P56159 U3.13-201ENST00000364804 214 ntBASIC3.84□□□□□ -1.79
GFRA1P56159 RNU4-9P-201ENST00000364951 139 ntBASIC3.84□□□□□ -1.79
GFRA1P56159 RNU6-968P-201ENST00000384076 107 ntBASIC3.84□□□□□ -1.79
GFRA1P56159 Y_RNA.512-201ENST00000384518 102 ntBASIC3.84□□□□□ -1.79
GFRA1P56159 SNORD66.1-201ENST00000391230 76 ntBASIC3.84□□□□□ -1.79
GFRA1P56159 RPL21P1-201ENST00000399532 476 ntBASIC3.84□□□□□ -1.79
GFRA1P56159 RNA5SP44-201ENST00000410446 133 ntBASIC3.84□□□□□ -1.79
GFRA1P56159 EIF1AXP1-201ENST00000419267 435 ntBASIC3.84□□□□□ -1.79
GFRA1P56159 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.84□□□□□ -1.79
GFRA1P56159 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.84□□□□□ -1.79
GFRA1P56159 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.84□□□□□ -1.79
GFRA1P56159 AC099522.1-202ENST00000514718 367 ntBASIC3.84□□□□□ -1.79
GFRA1P56159 SNORA31.9-201ENST00000516429 84 ntBASIC3.84□□□□□ -1.79
GFRA1P56159 RNA5SP309-201ENST00000516670 106 ntBASIC3.84□□□□□ -1.79
GFRA1P56159 SNORA40.15-201ENST00000516884 107 ntBASIC3.84□□□□□ -1.79
GFRA1P56159 RNU6-1271P-201ENST00000517049 105 ntBASIC3.84□□□□□ -1.79
GFRA1P56159 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.84□□□□□ -1.79
GFRA1P56159 CR383656.8-201ENST00000549046 145 ntBASIC3.84□□□□□ -1.79
GFRA1P56159 SYF2P1-201ENST00000550658 413 ntBASIC3.84□□□□□ -1.79
GFRA1P56159 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.84□□□□□ -1.79
GFRA1P56159 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.84□□□□□ -1.79
GFRA1P56159 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
GFRA1P56159 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
GFRA1P56159 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
GFRA1P56159 AC092435.4-201ENST00000623012 4159 ntBASIC3.84□□□□□ -1.79
GFRA1P56159 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
GFRA1P56159 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms