Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC104237.2-201ENST00000612456 443 ntBASIC3.04□□□□□ -1.92
CDH12P55289 uc_338.15-201ENST00000615470 191 ntBASIC3.04□□□□□ -1.92
CDH12P55289 AC091903.1-201ENST00000624322 454 ntBASIC3.04□□□□□ -1.92
CDH12P55289 AC012442.3-202ENST00000636742 206 ntBASIC3.04□□□□□ -1.92
CDH12P55289 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.04□□□□□ -1.92
CDH12P55289 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDH12P55289 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDH12P55289 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
CDH12P55289 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CDH12P55289 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.03□□□□□ -1.92
CDH12P55289 RNU6-270P-201ENST00000364131 105 ntBASIC3.03□□□□□ -1.92
CDH12P55289 RNU6-1013P-201ENST00000384180 107 ntBASIC3.03□□□□□ -1.92
CDH12P55289 Y_RNA.480-201ENST00000384364 102 ntBASIC3.03□□□□□ -1.92
CDH12P55289 MIR554-201ENST00000384874 96 ntBASIC3.03□□□□□ -1.92
CDH12P55289 MIR218-2-201ENST00000385006 110 ntBASIC3.03□□□□□ -1.92
CDH12P55289 MIR591-201ENST00000385290 95 ntBASIC3.03□□□□□ -1.92
CDH12P55289 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CDH12P55289 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.03□□□□□ -1.92
CDH12P55289 TMEM167AP1-201ENST00000423409 219 ntBASIC3.03□□□□□ -1.92
CDH12P55289 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.03□□□□□ -1.92
CDH12P55289 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH12P55289 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.03□□□□□ -1.92
CDH12P55289 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.03□□□□□ -1.92
CDH12P55289 AL583843.1-201ENST00000456070 346 ntBASIC3.03□□□□□ -1.92
CDH12P55289 RN7SL542P-201ENST00000467147 294 ntBASIC3.03□□□□□ -1.92
CDH12P55289 MTND4P17-201ENST00000470444 350 ntBASIC3.03□□□□□ -1.92
CDH12P55289 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.03□□□□□ -1.92
CDH12P55289 Y_RNA.682-201ENST00000516457 100 ntBASIC3.03□□□□□ -1.92
CDH12P55289 SNORA31.19-201ENST00000517079 126 ntBASIC3.03□□□□□ -1.92
CDH12P55289 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.03□□□□□ -1.92
CDH12P55289 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.03□□□□□ -1.92
CDH12P55289 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH12P55289 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.03□□□□□ -1.92
CDH12P55289 MIR3922-201ENST00000585192 84 ntBASIC3.03□□□□□ -1.92
CDH12P55289 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.03□□□□□ -1.92
CDH12P55289 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CDH12P55289 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CDH12P55289 RMST_4.1-201ENST00000616886 107 ntBASIC3.03□□□□□ -1.92
CDH12P55289 PLCE1P1-201ENST00000622094 305 ntBASIC3.03□□□□□ -1.92
CDH12P55289 AC099506.2-201ENST00000623074 221 ntBASIC3.03□□□□□ -1.92
CDH12P55289 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CDH12P55289 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CDH12P55289 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.02□□□□□ -1.93
CDH12P55289 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.02□□□□□ -1.93
CDH12P55289 AC138393.1-203ENST00000327086 343 ntBASIC3.02□□□□□ -1.93
CDH12P55289 U3.6-201ENST00000363622 211 ntBASIC3.02□□□□□ -1.93
CDH12P55289 Y_RNA.212-201ENST00000364177 102 ntBASIC3.02□□□□□ -1.93
CDH12P55289 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CDH12P55289 SNORA40C-201ENST00000391285 128 ntBASIC3.02□□□□□ -1.93
CDH12P55289 AP000567.1-201ENST00000406413 156 ntBASIC3.02□□□□□ -1.93
CDH12P55289 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.02□□□□□ -1.93
CDH12P55289 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.02□□□□□ -1.93
CDH12P55289 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.02□□□□□ -1.93
CDH12P55289 RPL32P28-201ENST00000443577 397 ntBASIC3.02□□□□□ -1.93
CDH12P55289 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.02□□□□□ -1.93
CDH12P55289 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.02□□□□□ -1.93
CDH12P55289 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.02□□□□□ -1.93
CDH12P55289 AC011005.2-201ENST00000487324 359 ntBASIC3.02□□□□□ -1.93
CDH12P55289 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.02□□□□□ -1.93
CDH12P55289 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.02□□□□□ -1.93
CDH12P55289 Y_RNA.675-201ENST00000516389 149 ntBASIC3.02□□□□□ -1.93
CDH12P55289 MIR892C-201ENST00000516410 77 ntBASIC3.02□□□□□ -1.93
CDH12P55289 RNU6-566P-201ENST00000516790 107 ntBASIC3.02□□□□□ -1.93
CDH12P55289 RNU6-928P-201ENST00000516876 104 ntBASIC3.02□□□□□ -1.93
CDH12P55289 AC026403.1-201ENST00000518938 295 ntBASIC3.02□□□□□ -1.93
CDH12P55289 RNU6-323P-201ENST00000521915 107 ntBASIC3.02□□□□□ -1.93
CDH12P55289 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.02□□□□□ -1.93
CDH12P55289 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CDH12P55289 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.02□□□□□ -1.93
CDH12P55289 AMZ2P1-203ENST00000565833 850 ntBASIC3.02□□□□□ -1.93
CDH12P55289 AL355375.2-201ENST00000574825 175 ntBASIC3.02□□□□□ -1.93
CDH12P55289 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.02□□□□□ -1.93
CDH12P55289 AC006130.2-201ENST00000586202 326 ntBASIC3.02□□□□□ -1.93
CDH12P55289 AC023043.2-201ENST00000589678 1026 ntBASIC3.02□□□□□ -1.93
CDH12P55289 AL591516.1-201ENST00000611326 274 ntBASIC3.02□□□□□ -1.93
CDH12P55289 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.02□□□□□ -1.93
CDH12P55289 AL138726.1-201ENST00000614873 333 ntBASIC3.02□□□□□ -1.93
CDH12P55289 U2.21-201ENST00000637295 81 ntBASIC3.02□□□□□ -1.93
CDH12P55289 MIR1302-1-201ENST00000637932 143 ntBASIC3.02□□□□□ -1.93
CDH12P55289 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.02□□□□□ -1.93
CDH12P55289 CUL1P1-201ENST00000509510 2425 ntBASIC3.02□□□□□ -1.93
CDH12P55289 AL161912.2-201ENST00000565707 3007 ntBASIC3.02□□□□□ -1.93
CDH12P55289 MAPK10-362ENST00000641864 4484 ntBASIC3.02□□□□□ -1.93
CDH12P55289 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
CDH12P55289 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.02□□□□□ -1.93
CDH12P55289 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.01□□□□□ -1.93
CDH12P55289 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDH12P55289 MIR412-201ENST00000362142 91 ntBASIC3.01□□□□□ -1.93
CDH12P55289 RNA5SP119-201ENST00000362715 117 ntBASIC3.01□□□□□ -1.93
CDH12P55289 Y_RNA.135-201ENST00000363439 95 ntBASIC3.01□□□□□ -1.93
CDH12P55289 SNORD14B-201ENST00000364533 90 ntBASIC3.01□□□□□ -1.93
CDH12P55289 Y_RNA.324-201ENST00000365165 102 ntBASIC3.01□□□□□ -1.93
CDH12P55289 Y_RNA.339-201ENST00000365325 102 ntBASIC3.01□□□□□ -1.93
CDH12P55289 RNU6-166P-201ENST00000384371 107 ntBASIC3.01□□□□□ -1.93
CDH12P55289 Y_RNA.535-201ENST00000384612 99 ntBASIC3.01□□□□□ -1.93
CDH12P55289 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.01□□□□□ -1.93
CDH12P55289 RPS29P4-201ENST00000414733 161 ntBASIC3.01□□□□□ -1.93
CDH12P55289 BRK1P2-201ENST00000442875 223 ntBASIC3.01□□□□□ -1.93
CDH12P55289 UBE2V1P7-201ENST00000446395 340 ntBASIC3.01□□□□□ -1.93
CDH12P55289 AC233279.1-201ENST00000455300 423 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms