Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SMIM11P1-201ENST00000369586 178 ntBASIC2.52□□□□□ -2.01
HMGCS2P54868 SNORA20.2-201ENST00000383922 131 ntBASIC2.52□□□□□ -2.01
HMGCS2P54868 RNU6-701P-201ENST00000384059 107 ntBASIC2.52□□□□□ -2.01
HMGCS2P54868 RNU6-1035P-201ENST00000384477 107 ntBASIC2.52□□□□□ -2.01
HMGCS2P54868 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HMGCS2P54868 NDUFS5P1-201ENST00000405668 289 ntBASIC2.52□□□□□ -2.01
HMGCS2P54868 RNU2-66P-201ENST00000410650 161 ntBASIC2.52□□□□□ -2.01
HMGCS2P54868 RNU2-8P-201ENST00000410727 190 ntBASIC2.52□□□□□ -2.01
HMGCS2P54868 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.52□□□□□ -2.01
HMGCS2P54868 ZNF90P2-204ENST00000419323 1075 ntBASIC2.52□□□□□ -2.01
HMGCS2P54868 AL512844.2-201ENST00000433990 593 ntBASIC2.52□□□□□ -2.01
HMGCS2P54868 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.52□□□□□ -2.01
HMGCS2P54868 RPL39P40-201ENST00000445481 146 ntBASIC2.52□□□□□ -2.01
HMGCS2P54868 GSTA11P-201ENST00000452866 669 ntBASIC2.52□□□□□ -2.01
HMGCS2P54868 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.52□□□□□ -2.01
HMGCS2P54868 RPS27AP9-201ENST00000477681 438 ntBASIC2.52□□□□□ -2.01
HMGCS2P54868 RPL38P4-201ENST00000502376 214 ntBASIC2.52□□□□□ -2.01
HMGCS2P54868 AC105252.1-201ENST00000503089 286 ntBASIC2.52□□□□□ -2.01
HMGCS2P54868 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.52□□□□□ -2.01
HMGCS2P54868 AC091435.1-201ENST00000505442 584 ntBASIC2.52□□□□□ -2.01
HMGCS2P54868 RNU2-10P-201ENST00000516375 211 ntBASIC2.52□□□□□ -2.01
HMGCS2P54868 SCARNA24.1-201ENST00000516465 137 ntBASIC2.52□□□□□ -2.01
HMGCS2P54868 RNU6-1282P-201ENST00000516735 96 ntBASIC2.52□□□□□ -2.01
HMGCS2P54868 RNU6-548P-201ENST00000517083 115 ntBASIC2.52□□□□□ -2.01
HMGCS2P54868 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
HMGCS2P54868 MTCO2P4-201ENST00000517968 247 ntBASIC2.52□□□□□ -2.01
HMGCS2P54868 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.52□□□□□ -2.01
HMGCS2P54868 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.52□□□□□ -2.01
HMGCS2P54868 RPS3AP4-201ENST00000555161 764 ntBASIC2.52□□□□□ -2.01
HMGCS2P54868 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.52□□□□□ -2.01
HMGCS2P54868 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.52□□□□□ -2.01
HMGCS2P54868 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.52□□□□□ -2.01
HMGCS2P54868 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.52□□□□□ -2.01
HMGCS2P54868 AP002360.4-201ENST00000606980 481 ntBASIC2.52□□□□□ -2.01
HMGCS2P54868 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.52□□□□□ -2.01
HMGCS2P54868 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
HMGCS2P54868 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
HMGCS2P54868 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HMGCS2P54868 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HMGCS2P54868 HSPE1P11-201ENST00000339579 310 ntBASIC2.51□□□□□ -2.01
HMGCS2P54868 RNU6-623P-201ENST00000363143 105 ntBASIC2.51□□□□□ -2.01
HMGCS2P54868 SNORA25.6-201ENST00000364121 118 ntBASIC2.51□□□□□ -2.01
HMGCS2P54868 RNU2-16P-201ENST00000410712 136 ntBASIC2.51□□□□□ -2.01
HMGCS2P54868 ELOCP4-201ENST00000420090 333 ntBASIC2.51□□□□□ -2.01
HMGCS2P54868 RPL36AP6-201ENST00000435770 321 ntBASIC2.51□□□□□ -2.01
HMGCS2P54868 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.51□□□□□ -2.01
HMGCS2P54868 AC087588.1-201ENST00000462203 316 ntBASIC2.51□□□□□ -2.01
HMGCS2P54868 RPL23AP42-201ENST00000471152 471 ntBASIC2.51□□□□□ -2.01
HMGCS2P54868 RPS27P26-201ENST00000494583 239 ntBASIC2.51□□□□□ -2.01
HMGCS2P54868 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.51□□□□□ -2.01
HMGCS2P54868 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.51□□□□□ -2.01
HMGCS2P54868 RNU6-927P-201ENST00000516199 100 ntBASIC2.51□□□□□ -2.01
HMGCS2P54868 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
HMGCS2P54868 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.51□□□□□ -2.01
HMGCS2P54868 AC011979.2-201ENST00000527568 352 ntBASIC2.51□□□□□ -2.01
HMGCS2P54868 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.51□□□□□ -2.01
HMGCS2P54868 AC087883.1-201ENST00000551882 391 ntBASIC2.51□□□□□ -2.01
HMGCS2P54868 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.51□□□□□ -2.01
HMGCS2P54868 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.51□□□□□ -2.01
HMGCS2P54868 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.51□□□□□ -2.01
HMGCS2P54868 AL645944.1-201ENST00000603857 493 ntBASIC2.51□□□□□ -2.01
HMGCS2P54868 AC007363.1-201ENST00000604736 620 ntBASIC2.51□□□□□ -2.01
HMGCS2P54868 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.51□□□□□ -2.01
HMGCS2P54868 AC005332.10-201ENST00000612725 619 ntBASIC2.51□□□□□ -2.01
HMGCS2P54868 AL353997.5-201ENST00000618886 171 ntBASIC2.51□□□□□ -2.01
HMGCS2P54868 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.51□□□□□ -2.01
HMGCS2P54868 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.51□□□□□ -2.01
HMGCS2P54868 MTND1P37-201ENST00000636562 264 ntBASIC2.51□□□□□ -2.01
HMGCS2P54868 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.51□□□□□ -2.01
HMGCS2P54868 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.51□□□□□ -2.01
HMGCS2P54868 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
HMGCS2P54868 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HMGCS2P54868 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HMGCS2P54868 RNU6-960P-201ENST00000364056 120 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 RNU6-188P-201ENST00000364207 107 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 MIR325-201ENST00000385260 98 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 BX682237.1-201ENST00000415016 335 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.5□□□□□ -2.01
HMGCS2P54868 PIGFP2-201ENST00000421400 651 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 RAC1P6-201ENST00000423911 575 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 AC092047.1-201ENST00000424997 240 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 AC137499.1-201ENST00000427602 88 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 AC010975.2-201ENST00000427781 588 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 AL358934.1-201ENST00000432346 324 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 BNIP3P2-201ENST00000441221 577 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 AL136380.1-201ENST00000447970 162 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 SNORD97-201ENST00000459187 142 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.5□□□□□ -2.01
HMGCS2P54868 SEM1P1-201ENST00000506694 209 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 AC091133.4-201ENST00000511142 308 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 Y_RNA.655-201ENST00000515919 96 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 RNU6-928P-201ENST00000516876 104 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 RNU6-1092P-201ENST00000516955 87 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 AP003072.2-201ENST00000527756 676 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.5□□□□□ -2.01
HMGCS2P54868 AC245014.2-201ENST00000603689 287 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 AC246785.4-201ENST00000605374 287 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 NDUFA8P1-201ENST00000605525 367 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms