Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 SNRPEP9-201ENST00000436794 238 ntBASIC4.24□□□□□ -1.73
CCNFP41002 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.24□□□□□ -1.73
CCNFP41002 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.24□□□□□ -1.73
CCNFP41002 NUTF2P7-201ENST00000453086 375 ntBASIC4.24□□□□□ -1.73
CCNFP41002 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.24□□□□□ -1.73
CCNFP41002 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.24□□□□□ -1.73
CCNFP41002 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.24□□□□□ -1.73
CCNFP41002 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.24□□□□□ -1.73
CCNFP41002 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCNFP41002 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.24□□□□□ -1.73
CCNFP41002 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.24□□□□□ -1.73
CCNFP41002 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.24□□□□□ -1.73
CCNFP41002 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.24□□□□□ -1.73
CCNFP41002 AC125232.2-201ENST00000592457 143 ntBASIC4.24□□□□□ -1.73
CCNFP41002 AC136601.2-201ENST00000604356 474 ntBASIC4.24□□□□□ -1.73
CCNFP41002 AC107871.2-201ENST00000612894 502 ntBASIC4.24□□□□□ -1.73
CCNFP41002 AC048347.1-201ENST00000624621 427 ntBASIC4.24□□□□□ -1.73
CCNFP41002 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.24□□□□□ -1.73
CCNFP41002 LINC02471-203ENST00000641941 4752 ntBASIC4.24□□□□□ -1.73
CCNFP41002 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCNFP41002 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.23□□□□□ -1.73
CCNFP41002 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CCNFP41002 MTND5P7-201ENST00000413558 1798 ntBASIC4.23□□□□□ -1.73
CCNFP41002 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CCNFP41002 MIR331-201ENST00000362302 94 ntBASIC4.23□□□□□ -1.73
CCNFP41002 RNU1-32P-201ENST00000363937 159 ntBASIC4.23□□□□□ -1.73
CCNFP41002 RNU6-595P-201ENST00000363944 107 ntBASIC4.23□□□□□ -1.73
CCNFP41002 Y_RNA.461-201ENST00000384263 103 ntBASIC4.23□□□□□ -1.73
CCNFP41002 RPL21P1-201ENST00000399532 476 ntBASIC4.23□□□□□ -1.73
CCNFP41002 MIR1179-201ENST00000408703 91 ntBASIC4.23□□□□□ -1.73
CCNFP41002 SNORA3C-201ENST00000408792 125 ntBASIC4.23□□□□□ -1.73
CCNFP41002 RNA5SP494-201ENST00000410653 129 ntBASIC4.23□□□□□ -1.73
CCNFP41002 RNU2-37P-201ENST00000410695 177 ntBASIC4.23□□□□□ -1.73
CCNFP41002 AC092047.1-201ENST00000424997 240 ntBASIC4.23□□□□□ -1.73
CCNFP41002 AC098614.2-201ENST00000426040 255 ntBASIC4.23□□□□□ -1.73
CCNFP41002 RPS29P17-201ENST00000430795 166 ntBASIC4.23□□□□□ -1.73
CCNFP41002 AC011742.1-201ENST00000431448 434 ntBASIC4.23□□□□□ -1.73
CCNFP41002 NDUFB4P6-201ENST00000436819 366 ntBASIC4.23□□□□□ -1.73
CCNFP41002 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.23□□□□□ -1.73
CCNFP41002 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.23□□□□□ -1.73
CCNFP41002 AL592156.1-201ENST00000508758 304 ntBASIC4.23□□□□□ -1.73
CCNFP41002 AC093840.1-201ENST00000511599 336 ntBASIC4.23□□□□□ -1.73
CCNFP41002 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.23□□□□□ -1.73
CCNFP41002 RNU6-1282P-201ENST00000516735 96 ntBASIC4.23□□□□□ -1.73
CCNFP41002 AC074050.1-201ENST00000563247 211 ntBASIC4.23□□□□□ -1.73
CCNFP41002 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.23□□□□□ -1.73
CCNFP41002 MIR4782-201ENST00000577987 79 ntBASIC4.23□□□□□ -1.73
CCNFP41002 MIR4284-201ENST00000578924 81 ntBASIC4.23□□□□□ -1.73
CCNFP41002 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.23□□□□□ -1.73
CCNFP41002 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.23□□□□□ -1.73
CCNFP41002 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCNFP41002 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCNFP41002 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.22□□□□□ -1.73
CCNFP41002 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CCNFP41002 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.22□□□□□ -1.73
CCNFP41002 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCNFP41002 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCNFP41002 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCNFP41002 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCNFP41002 Y_RNA.123-201ENST00000363338 102 ntBASIC4.22□□□□□ -1.73
CCNFP41002 RNU4-50P-201ENST00000364361 141 ntBASIC4.22□□□□□ -1.73
CCNFP41002 Y_RNA.288-201ENST00000364854 92 ntBASIC4.22□□□□□ -1.73
CCNFP41002 RNU6-784P-201ENST00000384330 106 ntBASIC4.22□□□□□ -1.73
CCNFP41002 Y_RNA.551-201ENST00000384661 102 ntBASIC4.22□□□□□ -1.73
CCNFP41002 SAR1AP2-201ENST00000392696 594 ntBASIC4.22□□□□□ -1.73
CCNFP41002 MIR1302-6-201ENST00000408466 90 ntBASIC4.22□□□□□ -1.73
CCNFP41002 AL356535.1-201ENST00000440335 398 ntBASIC4.22□□□□□ -1.73
CCNFP41002 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.22□□□□□ -1.73
CCNFP41002 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.22□□□□□ -1.73
CCNFP41002 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.22□□□□□ -1.73
CCNFP41002 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.22□□□□□ -1.73
CCNFP41002 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.22□□□□□ -1.73
CCNFP41002 Y_RNA.668-201ENST00000516233 93 ntBASIC4.22□□□□□ -1.73
CCNFP41002 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.22□□□□□ -1.73
CCNFP41002 HSPE1P20-201ENST00000538133 289 ntBASIC4.22□□□□□ -1.73
CCNFP41002 AC005476.1-201ENST00000554427 397 ntBASIC4.22□□□□□ -1.73
CCNFP41002 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.22□□□□□ -1.73
CCNFP41002 MIR5696-201ENST00000578474 85 ntBASIC4.22□□□□□ -1.73
CCNFP41002 AC005357.1-201ENST00000588399 301 ntBASIC4.22□□□□□ -1.73
CCNFP41002 AC006557.5-201ENST00000603126 811 ntBASIC4.22□□□□□ -1.73
CCNFP41002 AC008745.1-201ENST00000604064 271 ntBASIC4.22□□□□□ -1.73
CCNFP41002 RAC1P9-201ENST00000604990 392 ntBASIC4.22□□□□□ -1.73
CCNFP41002 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.22□□□□□ -1.73
CCNFP41002 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.22□□□□□ -1.73
CCNFP41002 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.22□□□□□ -1.73
CCNFP41002 AC103858.2-201ENST00000621471 543 ntBASIC4.22□□□□□ -1.73
CCNFP41002 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.22□□□□□ -1.73
CCNFP41002 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.22□□□□□ -1.73
CCNFP41002 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCNFP41002 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CCNFP41002 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCNFP41002 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
CCNFP41002 AC008725.1-201ENST00000605123 2263 ntBASIC4.21□□□□□ -1.73
CCNFP41002 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CCNFP41002 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CCNFP41002 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCNFP41002 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCNFP41002 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
CCNFP41002 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
CCNFP41002 Y_RNA.64-201ENST00000362845 102 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms