Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC5.19□□□□□ -1.58
RFC5P40937 RPL26P26-201ENST00000480251 434 ntBASIC5.19□□□□□ -1.58
RFC5P40937 MRPL42P6-201ENST00000486397 371 ntBASIC5.19□□□□□ -1.58
RFC5P40937 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.19□□□□□ -1.58
RFC5P40937 RN7SKP122-201ENST00000515923 296 ntBASIC5.19□□□□□ -1.58
RFC5P40937 Y_RNA.679-201ENST00000516416 91 ntBASIC5.19□□□□□ -1.58
RFC5P40937 RNU6-58P-201ENST00000517143 103 ntBASIC5.19□□□□□ -1.58
RFC5P40937 AL021997.2-201ENST00000615674 271 ntBASIC5.19□□□□□ -1.58
RFC5P40937 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.19□□□□□ -1.58
RFC5P40937 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RFC5P40937 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RFC5P40937 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RFC5P40937 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.19□□□□□ -1.58
RFC5P40937 AC107068.1-201ENST00000563286 4218 ntBASIC5.18□□□□□ -1.58
RFC5P40937 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.18□□□□□ -1.58
RFC5P40937 AL445487.1-201ENST00000415694 1580 ntBASIC5.18□□□□□ -1.58
RFC5P40937 DLEU2_6.3-201ENST00000340052 136 ntBASIC5.18□□□□□ -1.58
RFC5P40937 SNORA31-201ENST00000362607 130 ntBASIC5.18□□□□□ -1.58
RFC5P40937 RNU6-626P-201ENST00000363354 107 ntBASIC5.18□□□□□ -1.58
RFC5P40937 RNU5F-3P-201ENST00000363767 117 ntBASIC5.18□□□□□ -1.58
RFC5P40937 RNA5SP515-201ENST00000364570 118 ntBASIC5.18□□□□□ -1.58
RFC5P40937 Y_RNA.292-201ENST00000364904 97 ntBASIC5.18□□□□□ -1.58
RFC5P40937 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RFC5P40937 SNORA56-201ENST00000383966 129 ntBASIC5.18□□□□□ -1.58
RFC5P40937 RN7SKP61-201ENST00000410642 295 ntBASIC5.18□□□□□ -1.58
RFC5P40937 RNU6-1001P-201ENST00000411265 100 ntBASIC5.18□□□□□ -1.58
RFC5P40937 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.18□□□□□ -1.58
RFC5P40937 AL358075.3-201ENST00000426289 226 ntBASIC5.18□□□□□ -1.58
RFC5P40937 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.18□□□□□ -1.58
RFC5P40937 AL162591.2-201ENST00000449634 317 ntBASIC5.18□□□□□ -1.58
RFC5P40937 AP000873.1-201ENST00000463987 400 ntBASIC5.18□□□□□ -1.58
RFC5P40937 RPL21P104-201ENST00000464143 478 ntBASIC5.18□□□□□ -1.58
RFC5P40937 AKIRIN2P1-201ENST00000505898 352 ntBASIC5.18□□□□□ -1.58
RFC5P40937 RNU6-567P-201ENST00000516746 107 ntBASIC5.18□□□□□ -1.58
RFC5P40937 RPL21P7-201ENST00000557463 483 ntBASIC5.18□□□□□ -1.58
RFC5P40937 MIR3910-1-201ENST00000580936 111 ntBASIC5.18□□□□□ -1.58
RFC5P40937 MIR3133-201ENST00000583157 78 ntBASIC5.18□□□□□ -1.58
RFC5P40937 DLEU2_6.2-201ENST00000620994 136 ntBASIC5.18□□□□□ -1.58
RFC5P40937 AC008785.1-201ENST00000624475 456 ntBASIC5.18□□□□□ -1.58
RFC5P40937 U3.53-201ENST00000628922 216 ntBASIC5.18□□□□□ -1.58
RFC5P40937 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RFC5P40937 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RFC5P40937 AC090740.1-201ENST00000623193 2262 ntBASIC5.18□□□□□ -1.58
RFC5P40937 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RFC5P40937 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RFC5P40937 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RFC5P40937 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RFC5P40937 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RFC5P40937 AC018529.3-201ENST00000624212 2254 ntBASIC5.17□□□□□ -1.58
RFC5P40937 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFC5P40937 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFC5P40937 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RFC5P40937 FTH1P15-201ENST00000406984 280 ntBASIC5.17□□□□□ -1.58
RFC5P40937 RN7SKP216-201ENST00000411050 312 ntBASIC5.17□□□□□ -1.58
RFC5P40937 RNU2-61P-201ENST00000411069 191 ntBASIC5.17□□□□□ -1.58
RFC5P40937 COX6CP10-201ENST00000416832 224 ntBASIC5.17□□□□□ -1.58
RFC5P40937 COX6B1P7-201ENST00000430845 235 ntBASIC5.17□□□□□ -1.58
RFC5P40937 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.17□□□□□ -1.58
RFC5P40937 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC5.17□□□□□ -1.58
RFC5P40937 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC5.17□□□□□ -1.58
RFC5P40937 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC5.17□□□□□ -1.58
RFC5P40937 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.17□□□□□ -1.58
RFC5P40937 AC006463.2-201ENST00000473326 348 ntBASIC5.17□□□□□ -1.58
RFC5P40937 AC084357.1-201ENST00000473404 255 ntBASIC5.17□□□□□ -1.58
RFC5P40937 RPS4XP22-201ENST00000480755 780 ntBASIC5.17□□□□□ -1.58
RFC5P40937 AC021231.3-201ENST00000558497 370 ntBASIC5.17□□□□□ -1.58
RFC5P40937 UBL5P4-201ENST00000562584 236 ntBASIC5.17□□□□□ -1.58
RFC5P40937 AL451007.1-201ENST00000595491 289 ntBASIC5.17□□□□□ -1.58
RFC5P40937 AC010620.2-201ENST00000600135 313 ntBASIC5.17□□□□□ -1.58
RFC5P40937 AC072026.1-201ENST00000605023 201 ntBASIC5.17□□□□□ -1.58
RFC5P40937 MESTIT1_1.1-201ENST00000618871 140 ntBASIC5.17□□□□□ -1.58
RFC5P40937 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.17□□□□□ -1.58
RFC5P40937 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFC5P40937 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFC5P40937 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.17□□□□□ -1.58
RFC5P40937 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.17□□□□□ -1.58
RFC5P40937 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
RFC5P40937 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFC5P40937 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFC5P40937 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFC5P40937 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.16□□□□□ -1.58
RFC5P40937 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFC5P40937 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
RFC5P40937 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFC5P40937 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFC5P40937 AC092268.1-201ENST00000342691 405 ntBASIC5.16□□□□□ -1.58
RFC5P40937 Y_RNA.122-201ENST00000363331 96 ntBASIC5.16□□□□□ -1.58
RFC5P40937 SNORD115-8-201ENST00000363856 82 ntBASIC5.16□□□□□ -1.58
RFC5P40937 Y_RNA.275-201ENST00000364726 110 ntBASIC5.16□□□□□ -1.58
RFC5P40937 SNORD115-38-201ENST00000365037 82 ntBASIC5.16□□□□□ -1.58
RFC5P40937 RNU6-20P-201ENST00000384106 107 ntBASIC5.16□□□□□ -1.58
RFC5P40937 RNU6-1145P-201ENST00000384246 107 ntBASIC5.16□□□□□ -1.58
RFC5P40937 Y_RNA.570-201ENST00000384750 101 ntBASIC5.16□□□□□ -1.58
RFC5P40937 MIR329-1-201ENST00000385028 80 ntBASIC5.16□□□□□ -1.58
RFC5P40937 RNA5SP332-201ENST00000391063 115 ntBASIC5.16□□□□□ -1.58
RFC5P40937 HLFP1-201ENST00000402375 499 ntBASIC5.16□□□□□ -1.58
RFC5P40937 AC078809.1-201ENST00000427601 140 ntBASIC5.16□□□□□ -1.58
RFC5P40937 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC5.16□□□□□ -1.58
RFC5P40937 AP004242.1-201ENST00000533701 349 ntBASIC5.16□□□□□ -1.58
RFC5P40937 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms