Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.6□□□□□ -1.67
PDE6BP35913 AC012531.5-201ENST00000611375 151 ntBASIC4.6□□□□□ -1.67
PDE6BP35913 ATP5A1P2-202ENST00000616464 443 ntBASIC4.6□□□□□ -1.67
PDE6BP35913 MIR6130-201ENST00000619419 109 ntBASIC4.6□□□□□ -1.67
PDE6BP35913 SCARNA15.3-201ENST00000626315 122 ntBASIC4.6□□□□□ -1.67
PDE6BP35913 SCARNA4.1-201ENST00000628597 123 ntBASIC4.6□□□□□ -1.67
PDE6BP35913 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDE6BP35913 MAPK10-373ENST00000641983 6772 ntBASIC4.6□□□□□ -1.67
PDE6BP35913 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
PDE6BP35913 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.59□□□□□ -1.67
PDE6BP35913 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PDE6BP35913 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
PDE6BP35913 RNU6-874P-201ENST00000362390 105 ntBASIC4.59□□□□□ -1.67
PDE6BP35913 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.59□□□□□ -1.67
PDE6BP35913 Y_RNA.399-201ENST00000383955 105 ntBASIC4.59□□□□□ -1.67
PDE6BP35913 RNU6-95P-201ENST00000384697 107 ntBASIC4.59□□□□□ -1.67
PDE6BP35913 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PDE6BP35913 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PDE6BP35913 RNA5SP424-201ENST00000390988 115 ntBASIC4.59□□□□□ -1.67
PDE6BP35913 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.59□□□□□ -1.67
PDE6BP35913 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.59□□□□□ -1.67
PDE6BP35913 AC005326.1-201ENST00000429197 123 ntBASIC4.59□□□□□ -1.67
PDE6BP35913 HMGB1P9-201ENST00000429856 646 ntBASIC4.59□□□□□ -1.67
PDE6BP35913 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.59□□□□□ -1.67
PDE6BP35913 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.59□□□□□ -1.67
PDE6BP35913 AC087884.1-201ENST00000469738 328 ntBASIC4.59□□□□□ -1.67
PDE6BP35913 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.59□□□□□ -1.67
PDE6BP35913 HMGB3P17-201ENST00000504195 649 ntBASIC4.59□□□□□ -1.67
PDE6BP35913 AC022493.2-201ENST00000506122 481 ntBASIC4.59□□□□□ -1.67
PDE6BP35913 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.59□□□□□ -1.67
PDE6BP35913 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.59□□□□□ -1.67
PDE6BP35913 SNORA14.1-201ENST00000516113 141 ntBASIC4.59□□□□□ -1.67
PDE6BP35913 RNU2-58P-201ENST00000516403 183 ntBASIC4.59□□□□□ -1.67
PDE6BP35913 SCARNA16.2-201ENST00000516520 172 ntBASIC4.59□□□□□ -1.67
PDE6BP35913 SNORD116.3-201ENST00000517176 78 ntBASIC4.59□□□□□ -1.67
PDE6BP35913 AC103783.1-201ENST00000520506 373 ntBASIC4.59□□□□□ -1.67
PDE6BP35913 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PDE6BP35913 MIR8062-201ENST00000621515 85 ntBASIC4.59□□□□□ -1.67
PDE6BP35913 AC138627.2-201ENST00000624202 601 ntBASIC4.59□□□□□ -1.67
PDE6BP35913 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.59□□□□□ -1.67
PDE6BP35913 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.59□□□□□ -1.67
PDE6BP35913 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
PDE6BP35913 MAPK10-253ENST00000641010 4072 ntBASIC4.59□□□□□ -1.68
PDE6BP35913 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PDE6BP35913 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
PDE6BP35913 MFSD8-236ENST00000641509 4050 ntBASIC4.58□□□□□ -1.68
PDE6BP35913 SNORA38.1-201ENST00000364172 131 ntBASIC4.58□□□□□ -1.68
PDE6BP35913 RNA5SP235-201ENST00000365411 114 ntBASIC4.58□□□□□ -1.68
PDE6BP35913 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDE6BP35913 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PDE6BP35913 RNU6-629P-201ENST00000384061 103 ntBASIC4.58□□□□□ -1.68
PDE6BP35913 Y_RNA.428-201ENST00000384078 102 ntBASIC4.58□□□□□ -1.68
PDE6BP35913 SNORD70.1-201ENST00000391007 85 ntBASIC4.58□□□□□ -1.68
PDE6BP35913 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.58□□□□□ -1.68
PDE6BP35913 RNU6-387P-201ENST00000411331 105 ntBASIC4.58□□□□□ -1.68
PDE6BP35913 RPLP0P7-201ENST00000416050 667 ntBASIC4.58□□□□□ -1.68
PDE6BP35913 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PDE6BP35913 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.58□□□□□ -1.68
PDE6BP35913 VDAC1P3-201ENST00000434069 851 ntBASIC4.58□□□□□ -1.68
PDE6BP35913 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.58□□□□□ -1.68
PDE6BP35913 AC112492.4-201ENST00000456549 352 ntBASIC4.58□□□□□ -1.68
PDE6BP35913 SNORD5.1-201ENST00000458800 75 ntBASIC4.58□□□□□ -1.68
PDE6BP35913 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.58□□□□□ -1.68
PDE6BP35913 AC135721.1-201ENST00000497954 479 ntBASIC4.58□□□□□ -1.68
PDE6BP35913 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.58□□□□□ -1.68
PDE6BP35913 MTND1P19-201ENST00000511780 315 ntBASIC4.58□□□□□ -1.68
PDE6BP35913 FTH1P9-201ENST00000513251 355 ntBASIC4.58□□□□□ -1.68
PDE6BP35913 RNU6-475P-201ENST00000516073 104 ntBASIC4.58□□□□□ -1.68
PDE6BP35913 RNY3P15-201ENST00000516297 97 ntBASIC4.58□□□□□ -1.68
PDE6BP35913 RNU1-103P-201ENST00000516502 125 ntBASIC4.58□□□□□ -1.68
PDE6BP35913 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDE6BP35913 AC011494.1-201ENST00000596454 237 ntBASIC4.58□□□□□ -1.68
PDE6BP35913 AL355297.3-201ENST00000604082 446 ntBASIC4.58□□□□□ -1.68
PDE6BP35913 AC006077.1-201ENST00000604746 343 ntBASIC4.58□□□□□ -1.68
PDE6BP35913 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.58□□□□□ -1.68
PDE6BP35913 AL021879.1-201ENST00000611756 288 ntBASIC4.58□□□□□ -1.68
PDE6BP35913 AC048347.1-201ENST00000624621 427 ntBASIC4.58□□□□□ -1.68
PDE6BP35913 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PDE6BP35913 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PDE6BP35913 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDE6BP35913 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.57□□□□□ -1.68
PDE6BP35913 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDE6BP35913 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.57□□□□□ -1.68
PDE6BP35913 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PDE6BP35913 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PDE6BP35913 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.57□□□□□ -1.68
PDE6BP35913 MIR128-1-201ENST00000384921 82 ntBASIC4.57□□□□□ -1.68
PDE6BP35913 MRPS18CP6-201ENST00000423587 223 ntBASIC4.57□□□□□ -1.68
PDE6BP35913 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.57□□□□□ -1.68
PDE6BP35913 USP9YP30-201ENST00000430729 455 ntBASIC4.57□□□□□ -1.68
PDE6BP35913 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.57□□□□□ -1.68
PDE6BP35913 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.57□□□□□ -1.68
PDE6BP35913 VN1R104P-201ENST00000505115 1009 ntBASIC4.57□□□□□ -1.68
PDE6BP35913 RNU2-53P-201ENST00000516257 147 ntBASIC4.57□□□□□ -1.68
PDE6BP35913 RNU6-1332P-201ENST00000516666 104 ntBASIC4.57□□□□□ -1.68
PDE6BP35913 RNA5SP468-201ENST00000516782 93 ntBASIC4.57□□□□□ -1.68
PDE6BP35913 CR383656.7-201ENST00000548164 174 ntBASIC4.57□□□□□ -1.68
PDE6BP35913 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.57□□□□□ -1.68
PDE6BP35913 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.57□□□□□ -1.68
PDE6BP35913 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms