Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AC107871.2-201ENST00000612894 502 ntBASIC3.18□□□□□ -1.9
KRT9P35527 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.18□□□□□ -1.9
KRT9P35527 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KRT9P35527 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.18□□□□□ -1.9
KRT9P35527 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
KRT9P35527 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.18□□□□□ -1.9
KRT9P35527 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
KRT9P35527 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.18□□□□□ -1.9
KRT9P35527 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
KRT9P35527 HSPA8P4-201ENST00000511877 1920 ntBASIC3.17□□□□□ -1.9
KRT9P35527 CDC27P3-201ENST00000635418 1910 ntBASIC3.17□□□□□ -1.9
KRT9P35527 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KRT9P35527 SNORD3E-201ENST00000362899 217 ntBASIC3.17□□□□□ -1.9
KRT9P35527 RNA5SP374-201ENST00000362939 125 ntBASIC3.17□□□□□ -1.9
KRT9P35527 SNORA68.1-201ENST00000364537 132 ntBASIC3.17□□□□□ -1.9
KRT9P35527 RN7SKP226-201ENST00000364912 300 ntBASIC3.17□□□□□ -1.9
KRT9P35527 RNU6-898P-201ENST00000365627 104 ntBASIC3.17□□□□□ -1.9
KRT9P35527 SNORA54-201ENST00000384281 123 ntBASIC3.17□□□□□ -1.9
KRT9P35527 MIR578-201ENST00000384828 96 ntBASIC3.17□□□□□ -1.9
KRT9P35527 AL139039.1-201ENST00000401900 692 ntBASIC3.17□□□□□ -1.9
KRT9P35527 SNORD88.1-201ENST00000408684 91 ntBASIC3.17□□□□□ -1.9
KRT9P35527 OR6C66P-201ENST00000414917 930 ntBASIC3.17□□□□□ -1.9
KRT9P35527 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.17□□□□□ -1.9
KRT9P35527 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.17□□□□□ -1.9
KRT9P35527 AL139415.2-201ENST00000431968 163 ntBASIC3.17□□□□□ -1.9
KRT9P35527 AL162395.1-201ENST00000457882 422 ntBASIC3.17□□□□□ -1.9
KRT9P35527 RPS29P15-201ENST00000458329 171 ntBASIC3.17□□□□□ -1.9
KRT9P35527 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.17□□□□□ -1.9
KRT9P35527 MTAPP1-201ENST00000489154 819 ntBASIC3.17□□□□□ -1.9
KRT9P35527 AC010493.1-201ENST00000513479 292 ntBASIC3.17□□□□□ -1.9
KRT9P35527 RNA5SP76-201ENST00000516277 87 ntBASIC3.17□□□□□ -1.9
KRT9P35527 RNA5SP503-201ENST00000517047 117 ntBASIC3.17□□□□□ -1.9
KRT9P35527 AC016957.1-201ENST00000534895 309 ntBASIC3.17□□□□□ -1.9
KRT9P35527 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.17□□□□□ -1.9
KRT9P35527 BNIP3P30-201ENST00000601184 574 ntBASIC3.17□□□□□ -1.9
KRT9P35527 AC025449.1-201ENST00000603896 529 ntBASIC3.17□□□□□ -1.9
KRT9P35527 NDUFA8P1-201ENST00000605525 367 ntBASIC3.17□□□□□ -1.9
KRT9P35527 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KRT9P35527 AC090115.4-201ENST00000609970 188 ntBASIC3.17□□□□□ -1.9
KRT9P35527 AC010338.1-201ENST00000621823 717 ntBASIC3.17□□□□□ -1.9
KRT9P35527 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.17□□□□□ -1.9
KRT9P35527 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.17□□□□□ -1.9
KRT9P35527 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRT9P35527 AL161431.1-201ENST00000618966 4205 ntBASIC3.17□□□□□ -1.9
KRT9P35527 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
KRT9P35527 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRT9P35527 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.16□□□□□ -1.9
KRT9P35527 MIR412-201ENST00000362142 91 ntBASIC3.16□□□□□ -1.9
KRT9P35527 Y_RNA.41-201ENST00000362646 102 ntBASIC3.16□□□□□ -1.9
KRT9P35527 RNU6-116P-201ENST00000384042 109 ntBASIC3.16□□□□□ -1.9
KRT9P35527 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
KRT9P35527 SNORA48.2-201ENST00000390926 124 ntBASIC3.16□□□□□ -1.9
KRT9P35527 GSTA9P-201ENST00000406231 611 ntBASIC3.16□□□□□ -1.9
KRT9P35527 RNU2-9P-201ENST00000410194 145 ntBASIC3.16□□□□□ -1.9
KRT9P35527 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.16□□□□□ -1.9
KRT9P35527 MTATP6P18-201ENST00000417994 673 ntBASIC3.16□□□□□ -1.9
KRT9P35527 AC073464.1-201ENST00000429823 534 ntBASIC3.16□□□□□ -1.9
KRT9P35527 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.16□□□□□ -1.9
KRT9P35527 AL513043.1-201ENST00000439124 535 ntBASIC3.16□□□□□ -1.9
KRT9P35527 UBBP3-201ENST00000445497 241 ntBASIC3.16□□□□□ -1.9
KRT9P35527 NIPA2P5-201ENST00000452282 464 ntBASIC3.16□□□□□ -1.9
KRT9P35527 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.16□□□□□ -1.9
KRT9P35527 BTF3P15-201ENST00000455606 336 ntBASIC3.16□□□□□ -1.9
KRT9P35527 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.16□□□□□ -1.9
KRT9P35527 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
KRT9P35527 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.16□□□□□ -1.9
KRT9P35527 AC008549.1-201ENST00000512900 643 ntBASIC3.16□□□□□ -1.9
KRT9P35527 AP002404.1-201ENST00000532005 451 ntBASIC3.16□□□□□ -1.9
KRT9P35527 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.16□□□□□ -1.9
KRT9P35527 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.16□□□□□ -1.9
KRT9P35527 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.16□□□□□ -1.9
KRT9P35527 OR1M4P-201ENST00000589199 287 ntBASIC3.16□□□□□ -1.9
KRT9P35527 AL645944.1-201ENST00000603857 493 ntBASIC3.16□□□□□ -1.9
KRT9P35527 AC091152.3-201ENST00000604227 325 ntBASIC3.16□□□□□ -1.9
KRT9P35527 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.16□□□□□ -1.9
KRT9P35527 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.16□□□□□ -1.9
KRT9P35527 MIR7515-201ENST00000637837 67 ntBASIC3.16□□□□□ -1.9
KRT9P35527 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRT9P35527 AC026241.1-201ENST00000517873 2142 ntBASIC3.16□□□□□ -1.9
KRT9P35527 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
KRT9P35527 AC073346.2-201ENST00000624724 2058 ntBASIC3.15□□□□□ -1.9
KRT9P35527 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
KRT9P35527 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
KRT9P35527 RNU6-1287P-201ENST00000362914 107 ntBASIC3.15□□□□□ -1.91
KRT9P35527 Y_RNA.159-201ENST00000363674 87 ntBASIC3.15□□□□□ -1.91
KRT9P35527 Y_RNA.296-201ENST00000364930 108 ntBASIC3.15□□□□□ -1.91
KRT9P35527 RNU6-1029P-201ENST00000384109 107 ntBASIC3.15□□□□□ -1.91
KRT9P35527 RNU5A-6P-201ENST00000384136 116 ntBASIC3.15□□□□□ -1.91
KRT9P35527 RNU6-1060P-201ENST00000384664 107 ntBASIC3.15□□□□□ -1.91
KRT9P35527 MIR128-1-201ENST00000384921 82 ntBASIC3.15□□□□□ -1.91
KRT9P35527 MIR518D-201ENST00000385014 87 ntBASIC3.15□□□□□ -1.91
KRT9P35527 RNU6-550P-201ENST00000391057 101 ntBASIC3.15□□□□□ -1.91
KRT9P35527 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.15□□□□□ -1.91
KRT9P35527 Y_RNA.623-201ENST00000411128 95 ntBASIC3.15□□□□□ -1.91
KRT9P35527 AC104332.2-201ENST00000429959 156 ntBASIC3.15□□□□□ -1.91
KRT9P35527 AC022018.1-201ENST00000430685 241 ntBASIC3.15□□□□□ -1.91
KRT9P35527 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.15□□□□□ -1.91
KRT9P35527 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.15□□□□□ -1.91
KRT9P35527 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.15□□□□□ -1.91
KRT9P35527 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms