Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC104763.2-201ENST00000604179 382 ntBASIC2.07□□□□□ -2.08
RORAP35398 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.07□□□□□ -2.08
RORAP35398 AC092104.1-201ENST00000497346 1441 ntBASIC2.07□□□□□ -2.08
RORAP35398 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
RORAP35398 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
RORAP35398 RNU5E-6P-201ENST00000365574 115 ntBASIC2.06□□□□□ -2.08
RORAP35398 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
RORAP35398 Y_RNA.534-201ENST00000384599 112 ntBASIC2.06□□□□□ -2.08
RORAP35398 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
RORAP35398 SNORA11.4-201ENST00000408823 129 ntBASIC2.06□□□□□ -2.08
RORAP35398 HMGB3P2-201ENST00000411913 584 ntBASIC2.06□□□□□ -2.08
RORAP35398 RPS12P24-201ENST00000412619 387 ntBASIC2.06□□□□□ -2.08
RORAP35398 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.06□□□□□ -2.08
RORAP35398 MTND2P9-201ENST00000422293 931 ntBASIC2.06□□□□□ -2.08
RORAP35398 HMGN2P38-201ENST00000423806 265 ntBASIC2.06□□□□□ -2.08
RORAP35398 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.06□□□□□ -2.08
RORAP35398 AL365184.2-201ENST00000431139 435 ntBASIC2.06□□□□□ -2.08
RORAP35398 AL008629.1-201ENST00000438615 184 ntBASIC2.06□□□□□ -2.08
RORAP35398 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.06□□□□□ -2.08
RORAP35398 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.06□□□□□ -2.08
RORAP35398 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.06□□□□□ -2.08
RORAP35398 SNORD97-201ENST00000459187 142 ntBASIC2.06□□□□□ -2.08
RORAP35398 AC004263.1-201ENST00000479327 332 ntBASIC2.06□□□□□ -2.08
RORAP35398 MTND1P3-201ENST00000484956 952 ntBASIC2.06□□□□□ -2.08
RORAP35398 AC068781.1-201ENST00000488231 618 ntBASIC2.06□□□□□ -2.08
RORAP35398 RPL39P36-201ENST00000490784 156 ntBASIC2.06□□□□□ -2.08
RORAP35398 RNU6-1183P-201ENST00000517054 60 ntBASIC2.06□□□□□ -2.08
RORAP35398 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.06□□□□□ -2.08
RORAP35398 AC025755.1-201ENST00000521306 278 ntBASIC2.06□□□□□ -2.08
RORAP35398 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.06□□□□□ -2.08
RORAP35398 RANP3-201ENST00000530970 276 ntBASIC2.06□□□□□ -2.08
RORAP35398 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.06□□□□□ -2.08
RORAP35398 MTND1P24-201ENST00000552175 861 ntBASIC2.06□□□□□ -2.08
RORAP35398 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.06□□□□□ -2.08
RORAP35398 ROCK1P1-201ENST00000573767 549 ntBASIC2.06□□□□□ -2.08
RORAP35398 AC105245.1-201ENST00000581934 244 ntBASIC2.06□□□□□ -2.08
RORAP35398 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.06□□□□□ -2.08
RORAP35398 AC105129.3-201ENST00000605455 485 ntBASIC2.06□□□□□ -2.08
RORAP35398 AC006338.1-201ENST00000618453 749 ntBASIC2.06□□□□□ -2.08
RORAP35398 AC098657.3-201ENST00000620434 263 ntBASIC2.06□□□□□ -2.08
RORAP35398 MIR7843-201ENST00000622274 79 ntBASIC2.06□□□□□ -2.08
RORAP35398 AL160394.1-201ENST00000624765 724 ntBASIC2.06□□□□□ -2.08
RORAP35398 MIR219B-201ENST00000637023 88 ntBASIC2.06□□□□□ -2.08
RORAP35398 MTND5P42-201ENST00000637720 498 ntBASIC2.06□□□□□ -2.08
RORAP35398 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.06□□□□□ -2.08
RORAP35398 AL445523.1-201ENST00000451184 1362 ntBASIC2.06□□□□□ -2.08
RORAP35398 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.06□□□□□ -2.08
RORAP35398 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
RORAP35398 AP006437.1-201ENST00000641440 3685 ntBASIC2.05□□□□□ -2.08
RORAP35398 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
RORAP35398 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RORAP35398 RNU4-1-201ENST00000363925 141 ntBASIC2.05□□□□□ -2.08
RORAP35398 SNORD115.1-201ENST00000391109 76 ntBASIC2.05□□□□□ -2.08
RORAP35398 AL023284.1-201ENST00000403956 276 ntBASIC2.05□□□□□ -2.08
RORAP35398 AC092809.3-201ENST00000415453 231 ntBASIC2.05□□□□□ -2.08
RORAP35398 AC003685.2-201ENST00000422795 395 ntBASIC2.05□□□□□ -2.08
RORAP35398 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.05□□□□□ -2.08
RORAP35398 SRIP2-201ENST00000428470 166 ntBASIC2.05□□□□□ -2.08
RORAP35398 MTND4P25-201ENST00000441039 533 ntBASIC2.05□□□□□ -2.08
RORAP35398 MTND5P2-201ENST00000442927 1142 ntBASIC2.05□□□□□ -2.08
RORAP35398 EPS15P1-201ENST00000448836 336 ntBASIC2.05□□□□□ -2.08
RORAP35398 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.05□□□□□ -2.08
RORAP35398 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.05□□□□□ -2.08
RORAP35398 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.05□□□□□ -2.08
RORAP35398 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
RORAP35398 RNU6-678P-201ENST00000516832 109 ntBASIC2.05□□□□□ -2.08
RORAP35398 RNU6-143P-201ENST00000516942 93 ntBASIC2.05□□□□□ -2.08
RORAP35398 AC118273.2-201ENST00000532092 465 ntBASIC2.05□□□□□ -2.08
RORAP35398 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.05□□□□□ -2.08
RORAP35398 AC078814.3-201ENST00000553036 491 ntBASIC2.05□□□□□ -2.08
RORAP35398 AC009094.1-201ENST00000564443 426 ntBASIC2.05□□□□□ -2.08
RORAP35398 AC002400.1-201ENST00000569310 726 ntBASIC2.05□□□□□ -2.08
RORAP35398 MIR5697-201ENST00000578045 78 ntBASIC2.05□□□□□ -2.08
RORAP35398 AP001981.2-201ENST00000603241 418 ntBASIC2.05□□□□□ -2.08
RORAP35398 AL121917.1-203ENST00000605534 577 ntBASIC2.05□□□□□ -2.08
RORAP35398 AC092140.2-201ENST00000618027 521 ntBASIC2.05□□□□□ -2.08
RORAP35398 AL589994.2-201ENST00000621124 579 ntBASIC2.05□□□□□ -2.08
RORAP35398 AL359757.2-201ENST00000624309 274 ntBASIC2.05□□□□□ -2.08
RORAP35398 AC017037.3-201ENST00000625016 472 ntBASIC2.05□□□□□ -2.08
RORAP35398 PISRT1-201ENST00000626175 531 ntBASIC2.05□□□□□ -2.08
RORAP35398 Z99571.1-201ENST00000636677 394 ntBASIC2.05□□□□□ -2.08
RORAP35398 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
RORAP35398 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RORAP35398 AL359851.1-201ENST00000569460 4997 ntBASIC2.04□□□□□ -2.08
RORAP35398 RNU6-533P-201ENST00000384144 107 ntBASIC2.04□□□□□ -2.08
RORAP35398 SNORA67.3-201ENST00000384366 140 ntBASIC2.04□□□□□ -2.08
RORAP35398 RNU6-19P-201ENST00000384718 107 ntBASIC2.04□□□□□ -2.08
RORAP35398 MIR147B-201ENST00000390185 80 ntBASIC2.04□□□□□ -2.08
RORAP35398 MIR1289-2-201ENST00000408360 111 ntBASIC2.04□□□□□ -2.08
RORAP35398 U6atac.2-201ENST00000408644 118 ntBASIC2.04□□□□□ -2.08
RORAP35398 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.04□□□□□ -2.08
RORAP35398 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.04□□□□□ -2.08
RORAP35398 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.04□□□□□ -2.08
RORAP35398 RPS3AP44-201ENST00000425466 790 ntBASIC2.04□□□□□ -2.08
RORAP35398 PTGES3P4-201ENST00000426243 356 ntBASIC2.04□□□□□ -2.08
RORAP35398 TOMM20P4-201ENST00000427861 435 ntBASIC2.04□□□□□ -2.08
RORAP35398 RPL30P4-201ENST00000429309 333 ntBASIC2.04□□□□□ -2.08
RORAP35398 HMGN2P3-201ENST00000433603 273 ntBASIC2.04□□□□□ -2.08
RORAP35398 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.04□□□□□ -2.08
RORAP35398 HMGN2P5-201ENST00000436882 273 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms