Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.91□□□□□ -1.62
RXRBP28702 AC006028.1-201ENST00000438379 402 ntBASIC4.91□□□□□ -1.62
RXRBP28702 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.91□□□□□ -1.62
RXRBP28702 AL031274.1-201ENST00000450334 232 ntBASIC4.91□□□□□ -1.62
RXRBP28702 FABP5P13-201ENST00000452144 328 ntBASIC4.91□□□□□ -1.62
RXRBP28702 MTCO3P8-201ENST00000453691 755 ntBASIC4.91□□□□□ -1.62
RXRBP28702 RPL7P5-201ENST00000471472 736 ntBASIC4.91□□□□□ -1.62
RXRBP28702 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.91□□□□□ -1.62
RXRBP28702 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.91□□□□□ -1.62
RXRBP28702 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.91□□□□□ -1.62
RXRBP28702 MTCO3P44-201ENST00000510977 541 ntBASIC4.91□□□□□ -1.62
RXRBP28702 RNU6-570P-201ENST00000517051 105 ntBASIC4.91□□□□□ -1.62
RXRBP28702 RNU6-897P-201ENST00000517135 105 ntBASIC4.91□□□□□ -1.62
RXRBP28702 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RXRBP28702 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.91□□□□□ -1.62
RXRBP28702 AC022968.1-201ENST00000567372 442 ntBASIC4.91□□□□□ -1.62
RXRBP28702 AC010900.2-201ENST00000604508 210 ntBASIC4.91□□□□□ -1.62
RXRBP28702 AC002044.1-201ENST00000606707 158 ntBASIC4.91□□□□□ -1.62
RXRBP28702 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
RXRBP28702 ASNSP1-201ENST00000518311 1939 ntBASIC4.91□□□□□ -1.62
RXRBP28702 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.91□□□□□ -1.62
RXRBP28702 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
RXRBP28702 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RXRBP28702 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
RXRBP28702 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RXRBP28702 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
RXRBP28702 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.9□□□□□ -1.62
RXRBP28702 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RXRBP28702 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RXRBP28702 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RXRBP28702 RNU6-1303P-201ENST00000364841 107 ntBASIC4.9□□□□□ -1.63
RXRBP28702 RNU6-338P-201ENST00000383888 105 ntBASIC4.9□□□□□ -1.63
RXRBP28702 RNU6-187P-201ENST00000384139 106 ntBASIC4.9□□□□□ -1.63
RXRBP28702 PCNPP3-201ENST00000393579 471 ntBASIC4.9□□□□□ -1.63
RXRBP28702 RNU6-121P-201ENST00000410525 99 ntBASIC4.9□□□□□ -1.63
RXRBP28702 AC092809.3-201ENST00000415453 231 ntBASIC4.9□□□□□ -1.63
RXRBP28702 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.9□□□□□ -1.63
RXRBP28702 RPS12P5-201ENST00000423449 371 ntBASIC4.9□□□□□ -1.63
RXRBP28702 AL353997.1-201ENST00000432936 108 ntBASIC4.9□□□□□ -1.63
RXRBP28702 RPL23AP31-201ENST00000456160 467 ntBASIC4.9□□□□□ -1.63
RXRBP28702 LINC01399-202ENST00000458450 244 ntBASIC4.9□□□□□ -1.63
RXRBP28702 AC010631.1-201ENST00000474150 156 ntBASIC4.9□□□□□ -1.63
RXRBP28702 RNU6-397P-201ENST00000516226 104 ntBASIC4.9□□□□□ -1.63
RXRBP28702 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.9□□□□□ -1.63
RXRBP28702 AC006600.1-201ENST00000572529 153 ntBASIC4.9□□□□□ -1.63
RXRBP28702 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RXRBP28702 AC012119.1-201ENST00000603184 222 ntBASIC4.9□□□□□ -1.63
RXRBP28702 AL355812.1-201ENST00000603215 216 ntBASIC4.9□□□□□ -1.63
RXRBP28702 AL158032.1-201ENST00000605401 106 ntBASIC4.9□□□□□ -1.63
RXRBP28702 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.9□□□□□ -1.63
RXRBP28702 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RXRBP28702 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
RXRBP28702 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.89□□□□□ -1.63
RXRBP28702 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RXRBP28702 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RXRBP28702 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
RXRBP28702 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RXRBP28702 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
RXRBP28702 RNU6-596P-201ENST00000365395 98 ntBASIC4.89□□□□□ -1.63
RXRBP28702 RNU6-1329P-201ENST00000365664 107 ntBASIC4.89□□□□□ -1.63
RXRBP28702 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RXRBP28702 AC019155.1-201ENST00000382242 574 ntBASIC4.89□□□□□ -1.63
RXRBP28702 Y_RNA.416-201ENST00000384014 113 ntBASIC4.89□□□□□ -1.63
RXRBP28702 RNA5SP111-201ENST00000411386 101 ntBASIC4.89□□□□□ -1.63
RXRBP28702 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.89□□□□□ -1.63
RXRBP28702 AL591704.1-201ENST00000432574 275 ntBASIC4.89□□□□□ -1.63
RXRBP28702 AL121890.1-201ENST00000435457 205 ntBASIC4.89□□□□□ -1.63
RXRBP28702 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.89□□□□□ -1.63
RXRBP28702 AL121871.1-201ENST00000443413 436 ntBASIC4.89□□□□□ -1.63
RXRBP28702 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.89□□□□□ -1.63
RXRBP28702 RPL21P103-201ENST00000479921 488 ntBASIC4.89□□□□□ -1.63
RXRBP28702 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.89□□□□□ -1.63
RXRBP28702 Y_RNA.689-201ENST00000516589 107 ntBASIC4.89□□□□□ -1.63
RXRBP28702 AP003733.2-201ENST00000529409 171 ntBASIC4.89□□□□□ -1.63
RXRBP28702 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.89□□□□□ -1.63
RXRBP28702 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.89□□□□□ -1.63
RXRBP28702 TUG1_2.1-201ENST00000614234 87 ntBASIC4.89□□□□□ -1.63
RXRBP28702 AL159153.1-201ENST00000619688 317 ntBASIC4.89□□□□□ -1.63
RXRBP28702 U6.104-201ENST00000637979 90 ntBASIC4.89□□□□□ -1.63
RXRBP28702 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.89□□□□□ -1.63
RXRBP28702 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RXRBP28702 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RXRBP28702 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
RXRBP28702 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RXRBP28702 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.88□□□□□ -1.63
RXRBP28702 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RXRBP28702 RNU1-108P-201ENST00000362556 161 ntBASIC4.88□□□□□ -1.63
RXRBP28702 Y_RNA.48-201ENST00000362710 103 ntBASIC4.88□□□□□ -1.63
RXRBP28702 Y_RNA.274-201ENST00000364714 101 ntBASIC4.88□□□□□ -1.63
RXRBP28702 RNU6-14P-201ENST00000384630 106 ntBASIC4.88□□□□□ -1.63
RXRBP28702 RNU2-33P-201ENST00000410344 192 ntBASIC4.88□□□□□ -1.63
RXRBP28702 RPL21P38-201ENST00000418090 167 ntBASIC4.88□□□□□ -1.63
RXRBP28702 TRBVB-201ENST00000477100 408 ntBASIC4.88□□□□□ -1.63
RXRBP28702 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.88□□□□□ -1.63
RXRBP28702 SNORA70.18-201ENST00000516696 98 ntBASIC4.88□□□□□ -1.63
RXRBP28702 AC109329.1-201ENST00000518744 317 ntBASIC4.88□□□□□ -1.63
RXRBP28702 AP006587.4-201ENST00000526053 529 ntBASIC4.88□□□□□ -1.63
RXRBP28702 CBX3P8-201ENST00000532412 525 ntBASIC4.88□□□□□ -1.63
RXRBP28702 AC004792.1-201ENST00000614523 137 ntBASIC4.88□□□□□ -1.63
RXRBP28702 AP001282.2-201ENST00000616149 309 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms