Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 RNU6-1252P-201ENST00000363054 104 ntBASIC3.25□□□□□ -1.89
TNFSF4P23510 RNU6-487P-201ENST00000365430 104 ntBASIC3.25□□□□□ -1.89
TNFSF4P23510 RNU6-831P-201ENST00000384548 107 ntBASIC3.25□□□□□ -1.89
TNFSF4P23510 MIR554-201ENST00000384874 96 ntBASIC3.25□□□□□ -1.89
TNFSF4P23510 RNU6ATAC-201ENST00000408749 126 ntBASIC3.25□□□□□ -1.89
TNFSF4P23510 RN7SKP156-201ENST00000410308 342 ntBASIC3.25□□□□□ -1.89
TNFSF4P23510 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.25□□□□□ -1.89
TNFSF4P23510 UBE2V1P4-201ENST00000425374 344 ntBASIC3.25□□□□□ -1.89
TNFSF4P23510 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.25□□□□□ -1.89
TNFSF4P23510 AC098614.3-201ENST00000438957 440 ntBASIC3.25□□□□□ -1.89
TNFSF4P23510 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.25□□□□□ -1.89
TNFSF4P23510 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.25□□□□□ -1.89
TNFSF4P23510 AC013470.1-201ENST00000453438 462 ntBASIC3.25□□□□□ -1.89
TNFSF4P23510 RN7SL601P-201ENST00000471221 293 ntBASIC3.25□□□□□ -1.89
TNFSF4P23510 RPL23AP49-201ENST00000492925 468 ntBASIC3.25□□□□□ -1.89
TNFSF4P23510 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.25□□□□□ -1.89
TNFSF4P23510 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.25□□□□□ -1.89
TNFSF4P23510 AC026402.1-201ENST00000513642 170 ntBASIC3.25□□□□□ -1.89
TNFSF4P23510 RNU4-49P-201ENST00000516080 140 ntBASIC3.25□□□□□ -1.89
TNFSF4P23510 RNU5B-3P-201ENST00000516601 115 ntBASIC3.25□□□□□ -1.89
TNFSF4P23510 RNU6-1332P-201ENST00000516666 104 ntBASIC3.25□□□□□ -1.89
TNFSF4P23510 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.25□□□□□ -1.89
TNFSF4P23510 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.25□□□□□ -1.89
TNFSF4P23510 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.25□□□□□ -1.89
TNFSF4P23510 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.25□□□□□ -1.89
TNFSF4P23510 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.25□□□□□ -1.89
TNFSF4P23510 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.25□□□□□ -1.89
TNFSF4P23510 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.25□□□□□ -1.89
TNFSF4P23510 RN7SL703P-201ENST00000578485 302 ntBASIC3.25□□□□□ -1.89
TNFSF4P23510 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.25□□□□□ -1.89
TNFSF4P23510 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.25□□□□□ -1.89
TNFSF4P23510 FP236240.3-201ENST00000623061 327 ntBASIC3.25□□□□□ -1.89
TNFSF4P23510 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.25□□□□□ -1.89
TNFSF4P23510 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TNFSF4P23510 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.25□□□□□ -1.89
TNFSF4P23510 AC007496.3-201ENST00000624987 3443 ntBASIC3.25□□□□□ -1.89
TNFSF4P23510 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TNFSF4P23510 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TNFSF4P23510 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TNFSF4P23510 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.24□□□□□ -1.89
TNFSF4P23510 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TNFSF4P23510 RNU6-1329P-201ENST00000365664 107 ntBASIC3.24□□□□□ -1.89
TNFSF4P23510 RNU6-1083P-201ENST00000384022 107 ntBASIC3.24□□□□□ -1.89
TNFSF4P23510 RNU6-843P-201ENST00000384454 104 ntBASIC3.24□□□□□ -1.89
TNFSF4P23510 U3.26-201ENST00000391236 204 ntBASIC3.24□□□□□ -1.89
TNFSF4P23510 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.24□□□□□ -1.89
TNFSF4P23510 TRIAP1P1-201ENST00000427062 225 ntBASIC3.24□□□□□ -1.89
TNFSF4P23510 AL591419.1-201ENST00000427423 339 ntBASIC3.24□□□□□ -1.89
TNFSF4P23510 AC011742.1-201ENST00000431448 434 ntBASIC3.24□□□□□ -1.89
TNFSF4P23510 HMGN2P31-201ENST00000432430 273 ntBASIC3.24□□□□□ -1.89
TNFSF4P23510 AL591043.1-201ENST00000432461 424 ntBASIC3.24□□□□□ -1.89
TNFSF4P23510 MTCO2P3-201ENST00000442543 421 ntBASIC3.24□□□□□ -1.89
TNFSF4P23510 AC124916.1-201ENST00000444020 547 ntBASIC3.24□□□□□ -1.89
TNFSF4P23510 PMCHL2-203ENST00000457791 237 ntBASIC3.24□□□□□ -1.89
TNFSF4P23510 RPL27AP5-201ENST00000469428 449 ntBASIC3.24□□□□□ -1.89
TNFSF4P23510 AC084198.1-201ENST00000477747 402 ntBASIC3.24□□□□□ -1.89
TNFSF4P23510 SCARNA11.3-201ENST00000517276 130 ntBASIC3.24□□□□□ -1.89
TNFSF4P23510 TRMT10BP1-201ENST00000519377 943 ntBASIC3.24□□□□□ -1.89
TNFSF4P23510 AC243972.3-201ENST00000539655 198 ntBASIC3.24□□□□□ -1.89
TNFSF4P23510 AC026371.1-201ENST00000551867 419 ntBASIC3.24□□□□□ -1.89
TNFSF4P23510 AC106785.1-201ENST00000565935 262 ntBASIC3.24□□□□□ -1.89
TNFSF4P23510 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TNFSF4P23510 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.24□□□□□ -1.89
TNFSF4P23510 AC021646.1-201ENST00000605469 484 ntBASIC3.24□□□□□ -1.89
TNFSF4P23510 AC138627.2-201ENST00000624202 601 ntBASIC3.24□□□□□ -1.89
TNFSF4P23510 AC034229.5-201ENST00000624258 185 ntBASIC3.24□□□□□ -1.89
TNFSF4P23510 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.24□□□□□ -1.89
TNFSF4P23510 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.24□□□□□ -1.89
TNFSF4P23510 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TNFSF4P23510 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.24□□□□□ -1.89
TNFSF4P23510 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TNFSF4P23510 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TNFSF4P23510 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TNFSF4P23510 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TNFSF4P23510 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TNFSF4P23510 RNU6-527P-201ENST00000363425 104 ntBASIC3.23□□□□□ -1.89
TNFSF4P23510 Y_RNA.212-201ENST00000364177 102 ntBASIC3.23□□□□□ -1.89
TNFSF4P23510 RNU6-827P-201ENST00000365553 106 ntBASIC3.23□□□□□ -1.89
TNFSF4P23510 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TNFSF4P23510 RN7SKP32-201ENST00000410167 303 ntBASIC3.23□□□□□ -1.89
TNFSF4P23510 MTND3P8-201ENST00000412909 339 ntBASIC3.23□□□□□ -1.89
TNFSF4P23510 RPS15AP10-201ENST00000432472 382 ntBASIC3.23□□□□□ -1.89
TNFSF4P23510 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.23□□□□□ -1.89
TNFSF4P23510 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.23□□□□□ -1.89
TNFSF4P23510 RNU6-329P-201ENST00000459618 107 ntBASIC3.23□□□□□ -1.89
TNFSF4P23510 AC133134.1-201ENST00000466800 359 ntBASIC3.23□□□□□ -1.89
TNFSF4P23510 RPL7P43-201ENST00000478876 753 ntBASIC3.23□□□□□ -1.89
TNFSF4P23510 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.23□□□□□ -1.89
TNFSF4P23510 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.23□□□□□ -1.89
TNFSF4P23510 AL121579.1-201ENST00000555129 305 ntBASIC3.23□□□□□ -1.89
TNFSF4P23510 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.23□□□□□ -1.89
TNFSF4P23510 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.23□□□□□ -1.89
TNFSF4P23510 AC023043.2-201ENST00000589678 1026 ntBASIC3.23□□□□□ -1.89
TNFSF4P23510 VN1R107P-201ENST00000601784 209 ntBASIC3.23□□□□□ -1.89
TNFSF4P23510 AL137849.1-201ENST00000604767 169 ntBASIC3.23□□□□□ -1.89
TNFSF4P23510 AC022306.2-201ENST00000617563 647 ntBASIC3.23□□□□□ -1.89
TNFSF4P23510 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.23□□□□□ -1.89
TNFSF4P23510 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.23□□□□□ -1.89
TNFSF4P23510 MFSD8-236ENST00000641509 4050 ntBASIC3.23□□□□□ -1.89
TNFSF4P23510 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms