Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RPL21P47-201ENST00000483696 477 ntBASIC0.11□□□□□ -2.39
TOP2AP11388 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.11□□□□□ -2.39
TOP2AP11388 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.11□□□□□ -2.39
TOP2AP11388 AL391261.3-201ENST00000557194 520 ntBASIC0.11□□□□□ -2.39
TOP2AP11388 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.1□□□□□ -2.39
TOP2AP11388 Y_RNA.549-201ENST00000384657 102 ntBASIC0.1□□□□□ -2.39
TOP2AP11388 AL034374.1-201ENST00000406329 351 ntBASIC0.1□□□□□ -2.39
TOP2AP11388 RN7SKP5-201ENST00000517045 272 ntBASIC0.1□□□□□ -2.39
TOP2AP11388 AC107953.1-201ENST00000522216 297 ntBASIC0.1□□□□□ -2.39
TOP2AP11388 AC018659.1-201ENST00000551083 169 ntBASIC0.1□□□□□ -2.39
TOP2AP11388 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.1□□□□□ -2.39
TOP2AP11388 MIR4768-201ENST00000585270 74 ntBASIC0.1□□□□□ -2.39
TOP2AP11388 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC0.1□□□□□ -2.39
TOP2AP11388 RPS3AP36-201ENST00000398190 775 ntBASIC0.09□□□□□ -2.39
TOP2AP11388 RSL24D1P8-201ENST00000434442 492 ntBASIC0.09□□□□□ -2.39
TOP2AP11388 MTCYBP3-201ENST00000445588 1137 ntBASIC0.09□□□□□ -2.39
TOP2AP11388 PNPLA4P1-201ENST00000458328 305 ntBASIC0.09□□□□□ -2.39
TOP2AP11388 AC006512.1-201ENST00000468816 291 ntBASIC0.09□□□□□ -2.39
TOP2AP11388 AC114982.1-201ENST00000469402 321 ntBASIC0.09□□□□□ -2.39
TOP2AP11388 SCARNA1-201ENST00000517138 166 ntBASIC0.09□□□□□ -2.39
TOP2AP11388 AC023050.2-201ENST00000544968 387 ntBASIC0.09□□□□□ -2.39
TOP2AP11388 MIR8065-201ENST00000620577 100 ntBASIC0.09□□□□□ -2.39
TOP2AP11388 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.08□□□□□ -2.4
TOP2AP11388 AL356776.1-201ENST00000406574 447 ntBASIC0.08□□□□□ -2.4
TOP2AP11388 RNU6-1328P-201ENST00000410938 106 ntBASIC0.08□□□□□ -2.4
TOP2AP11388 RPL31P3-201ENST00000458430 332 ntBASIC0.08□□□□□ -2.4
TOP2AP11388 snoU13.9-201ENST00000458927 103 ntBASIC0.08□□□□□ -2.4
TOP2AP11388 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.08□□□□□ -2.4
TOP2AP11388 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.08□□□□□ -2.4
TOP2AP11388 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.08□□□□□ -2.4
TOP2AP11388 MIR892C-201ENST00000516410 77 ntBASIC0.08□□□□□ -2.4
TOP2AP11388 AC087897.1-201ENST00000550134 156 ntBASIC0.08□□□□□ -2.4
TOP2AP11388 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.08□□□□□ -2.4
TOP2AP11388 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.08□□□□□ -2.4
TOP2AP11388 AL355877.2-201ENST00000603670 358 ntBASIC0.08□□□□□ -2.4
TOP2AP11388 SNORA4.3-201ENST00000365564 137 ntBASIC0.08□□□□□ -2.4
TOP2AP11388 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
TOP2AP11388 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.08□□□□□ -2.4
TOP2AP11388 snoU13.28-201ENST00000459235 104 ntBASIC0.08□□□□□ -2.4
TOP2AP11388 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.08□□□□□ -2.4
TOP2AP11388 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.08□□□□□ -2.4
TOP2AP11388 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.08□□□□□ -2.4
TOP2AP11388 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
TOP2AP11388 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.07□□□□□ -2.4
TOP2AP11388 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.07□□□□□ -2.4
TOP2AP11388 AC244505.3-201ENST00000454598 187 ntBASIC0.07□□□□□ -2.4
TOP2AP11388 RNU6-197P-201ENST00000516680 100 ntBASIC0.07□□□□□ -2.4
TOP2AP11388 MIR8074-201ENST00000615081 81 ntBASIC0.07□□□□□ -2.4
TOP2AP11388 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
TOP2AP11388 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
TOP2AP11388 MIR411-201ENST00000362239 96 ntBASIC0.06□□□□□ -2.4
TOP2AP11388 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.06□□□□□ -2.4
TOP2AP11388 ZNF863P-201ENST00000426746 417 ntBASIC0.06□□□□□ -2.4
TOP2AP11388 AC034114.1-201ENST00000520293 285 ntBASIC0.06□□□□□ -2.4
TOP2AP11388 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.06□□□□□ -2.4
TOP2AP11388 AC017083.3-201ENST00000609955 700 ntBASIC0.06□□□□□ -2.4
TOP2AP11388 MIR6134-201ENST00000617606 109 ntBASIC0.06□□□□□ -2.4
TOP2AP11388 Z95118.1-201ENST00000421372 247 ntBASIC0.05□□□□□ -2.4
TOP2AP11388 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.05□□□□□ -2.4
TOP2AP11388 HSPE1P13-201ENST00000451143 297 ntBASIC0.05□□□□□ -2.4
TOP2AP11388 AL359385.1-201ENST00000456509 365 ntBASIC0.05□□□□□ -2.4
TOP2AP11388 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC0.05□□□□□ -2.4
TOP2AP11388 HMGN2P15-201ENST00000585707 270 ntBASIC0.05□□□□□ -2.4
TOP2AP11388 RPL30P11-203ENST00000598995 310 ntBASIC0.05□□□□□ -2.4
TOP2AP11388 RNU6-349P-201ENST00000362402 107 ntBASIC0.04□□□□□ -2.4
TOP2AP11388 RNU6-271P-201ENST00000363858 105 ntBASIC0.04□□□□□ -2.4
TOP2AP11388 MIR1295A-201ENST00000408463 79 ntBASIC0.04□□□□□ -2.4
TOP2AP11388 AC009310.1-201ENST00000414414 451 ntBASIC0.04□□□□□ -2.4
TOP2AP11388 Z99497.1-201ENST00000421282 135 ntBASIC0.04□□□□□ -2.4
TOP2AP11388 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.04□□□□□ -2.4
TOP2AP11388 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.04□□□□□ -2.4
TOP2AP11388 uc_338.22-201ENST00000622722 187 ntBASIC0.04□□□□□ -2.4
TOP2AP11388 Z99571.1-201ENST00000636677 394 ntBASIC0.04□□□□□ -2.4
TOP2AP11388 OR5T3-201ENST00000303059 1023 ntBASIC0.03□□□□□ -2.4
TOP2AP11388 RNU6-110P-201ENST00000384508 104 ntBASIC0.03□□□□□ -2.4
TOP2AP11388 RPS26P5-201ENST00000418544 335 ntBASIC0.03□□□□□ -2.4
TOP2AP11388 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.03□□□□□ -2.4
TOP2AP11388 PNRC2P1-201ENST00000423940 420 ntBASIC0.03□□□□□ -2.4
TOP2AP11388 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.03□□□□□ -2.4
TOP2AP11388 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
TOP2AP11388 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.03□□□□□ -2.4
TOP2AP11388 AL078604.3-201ENST00000615580 211 ntBASIC0.03□□□□□ -2.4
TOP2AP11388 AC099654.5-201ENST00000636479 350 ntBASIC0.03□□□□□ -2.4
TOP2AP11388 Y_RNA.167-201ENST00000363735 109 ntBASIC0.03□□□□□ -2.41
TOP2AP11388 AL031663.1-201ENST00000437445 219 ntBASIC0.03□□□□□ -2.41
TOP2AP11388 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.03□□□□□ -2.41
TOP2AP11388 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.03□□□□□ -2.41
TOP2AP11388 AC105224.1-201ENST00000587055 421 ntBASIC0.03□□□□□ -2.41
TOP2AP11388 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.03□□□□□ -2.41
TOP2AP11388 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
TOP2AP11388 RNU5D-1-201ENST00000363299 116 ntBASIC0.02□□□□□ -2.41
TOP2AP11388 MIR518D-201ENST00000385014 87 ntBASIC0.02□□□□□ -2.41
TOP2AP11388 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
TOP2AP11388 USP9YP26-201ENST00000421008 661 ntBASIC0.02□□□□□ -2.41
TOP2AP11388 USP9YP18-201ENST00000425912 695 ntBASIC0.02□□□□□ -2.41
TOP2AP11388 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.02□□□□□ -2.41
TOP2AP11388 USP9YP24-201ENST00000434374 697 ntBASIC0.02□□□□□ -2.41
TOP2AP11388 FGF7P5-201ENST00000441829 291 ntBASIC0.02□□□□□ -2.41
TOP2AP11388 USP9YP17-201ENST00000444617 696 ntBASIC0.02□□□□□ -2.41
TOP2AP11388 FAM157A-202ENST00000615155 405 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms