Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 AC241585.2-209ENST00000638217 143 ntBASIC3.4□□□□□ -1.87
PF4V1P10720 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PF4V1P10720 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PF4V1P10720 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.4□□□□□ -1.87
PF4V1P10720 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PF4V1P10720 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.4□□□□□ -1.87
PF4V1P10720 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PF4V1P10720 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.39□□□□□ -1.87
PF4V1P10720 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PF4V1P10720 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
PF4V1P10720 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PF4V1P10720 RNA5SP22-201ENST00000365393 109 ntBASIC3.39□□□□□ -1.87
PF4V1P10720 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
PF4V1P10720 SNORA48.8-201ENST00000391324 134 ntBASIC3.39□□□□□ -1.87
PF4V1P10720 RNU6-954P-201ENST00000411355 107 ntBASIC3.39□□□□□ -1.87
PF4V1P10720 AP000275.1-201ENST00000411943 390 ntBASIC3.39□□□□□ -1.87
PF4V1P10720 SYF2P2-201ENST00000417620 583 ntBASIC3.39□□□□□ -1.87
PF4V1P10720 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.39□□□□□ -1.87
PF4V1P10720 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.39□□□□□ -1.87
PF4V1P10720 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.39□□□□□ -1.87
PF4V1P10720 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.39□□□□□ -1.87
PF4V1P10720 NOTCH2P1-201ENST00000443481 624 ntBASIC3.39□□□□□ -1.87
PF4V1P10720 RPL21P23-201ENST00000446654 460 ntBASIC3.39□□□□□ -1.87
PF4V1P10720 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.39□□□□□ -1.87
PF4V1P10720 SNORD5.1-201ENST00000458800 75 ntBASIC3.39□□□□□ -1.87
PF4V1P10720 AP001324.2-201ENST00000461163 319 ntBASIC3.39□□□□□ -1.87
PF4V1P10720 AC006445.1-201ENST00000491925 405 ntBASIC3.39□□□□□ -1.87
PF4V1P10720 PTP4A1P4-201ENST00000512479 322 ntBASIC3.39□□□□□ -1.87
PF4V1P10720 AP005902.1-201ENST00000521358 186 ntBASIC3.39□□□□□ -1.87
PF4V1P10720 AP003730.1-201ENST00000524605 285 ntBASIC3.39□□□□□ -1.87
PF4V1P10720 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.39□□□□□ -1.87
PF4V1P10720 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.39□□□□□ -1.87
PF4V1P10720 RPS15AP11-201ENST00000594193 385 ntBASIC3.39□□□□□ -1.87
PF4V1P10720 AC008638.3-201ENST00000603341 463 ntBASIC3.39□□□□□ -1.87
PF4V1P10720 AP001836.1-201ENST00000604675 523 ntBASIC3.39□□□□□ -1.87
PF4V1P10720 AC010201.1-201ENST00000605051 540 ntBASIC3.39□□□□□ -1.87
PF4V1P10720 MIR8076-201ENST00000611401 83 ntBASIC3.39□□□□□ -1.87
PF4V1P10720 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
PF4V1P10720 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
PF4V1P10720 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PF4V1P10720 AC007496.3-201ENST00000624987 3443 ntBASIC3.39□□□□□ -1.87
PF4V1P10720 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.39□□□□□ -1.87
PF4V1P10720 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PF4V1P10720 AL109809.4-201ENST00000603520 2185 ntBASIC3.38□□□□□ -1.87
PF4V1P10720 HSPA8P1-201ENST00000425843 1833 ntBASIC3.38□□□□□ -1.87
PF4V1P10720 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PF4V1P10720 SPRR2C-201ENST00000290702 219 ntBASIC3.38□□□□□ -1.87
PF4V1P10720 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PF4V1P10720 Y_RNA.61-201ENST00000362835 102 ntBASIC3.38□□□□□ -1.87
PF4V1P10720 RNU6-227P-201ENST00000362865 103 ntBASIC3.38□□□□□ -1.87
PF4V1P10720 RNU6-1297P-201ENST00000384415 104 ntBASIC3.38□□□□□ -1.87
PF4V1P10720 MIR1289-1-201ENST00000408836 144 ntBASIC3.38□□□□□ -1.87
PF4V1P10720 MIR1911-201ENST00000410783 80 ntBASIC3.38□□□□□ -1.87
PF4V1P10720 SNORA74C-2-201ENST00000411179 201 ntBASIC3.38□□□□□ -1.87
PF4V1P10720 Z99755.1-201ENST00000414048 380 ntBASIC3.38□□□□□ -1.87
PF4V1P10720 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.38□□□□□ -1.87
PF4V1P10720 AL133396.1-201ENST00000432048 687 ntBASIC3.38□□□□□ -1.87
PF4V1P10720 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.38□□□□□ -1.87
PF4V1P10720 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.38□□□□□ -1.87
PF4V1P10720 RN7SL817P-201ENST00000480777 288 ntBASIC3.38□□□□□ -1.87
PF4V1P10720 AC006483.1-201ENST00000487308 313 ntBASIC3.38□□□□□ -1.87
PF4V1P10720 DEFB109F-201ENST00000491870 277 ntBASIC3.38□□□□□ -1.87
PF4V1P10720 RNU6-559P-201ENST00000516151 98 ntBASIC3.38□□□□□ -1.87
PF4V1P10720 Y_RNA.675-201ENST00000516389 149 ntBASIC3.38□□□□□ -1.87
PF4V1P10720 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.38□□□□□ -1.87
PF4V1P10720 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.38□□□□□ -1.87
PF4V1P10720 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.38□□□□□ -1.87
PF4V1P10720 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.38□□□□□ -1.87
PF4V1P10720 AC018462.2-201ENST00000605375 395 ntBASIC3.38□□□□□ -1.87
PF4V1P10720 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PF4V1P10720 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PF4V1P10720 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PF4V1P10720 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PF4V1P10720 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.38□□□□□ -1.87
PF4V1P10720 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PF4V1P10720 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
PF4V1P10720 MTND5P30-201ENST00000452896 1731 ntBASIC3.38□□□□□ -1.87
PF4V1P10720 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PF4V1P10720 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PF4V1P10720 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PF4V1P10720 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PF4V1P10720 SNORA60-201ENST00000362396 134 ntBASIC3.37□□□□□ -1.87
PF4V1P10720 RNU1-20P-201ENST00000363314 162 ntBASIC3.37□□□□□ -1.87
PF4V1P10720 RNU6-306P-201ENST00000384617 107 ntBASIC3.37□□□□□ -1.87
PF4V1P10720 BTF3L4P2-201ENST00000392798 346 ntBASIC3.37□□□□□ -1.87
PF4V1P10720 HDGFP1-201ENST00000405943 252 ntBASIC3.37□□□□□ -1.87
PF4V1P10720 AC108032.1-201ENST00000416706 207 ntBASIC3.37□□□□□ -1.87
PF4V1P10720 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.37□□□□□ -1.87
PF4V1P10720 RPL7P2-201ENST00000427639 268 ntBASIC3.37□□□□□ -1.87
PF4V1P10720 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.37□□□□□ -1.87
PF4V1P10720 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.37□□□□□ -1.87
PF4V1P10720 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.37□□□□□ -1.87
PF4V1P10720 RPL27AP5-201ENST00000469428 449 ntBASIC3.37□□□□□ -1.87
PF4V1P10720 RN7SL601P-201ENST00000471221 293 ntBASIC3.37□□□□□ -1.87
PF4V1P10720 ACA59.1-201ENST00000515966 143 ntBASIC3.37□□□□□ -1.87
PF4V1P10720 MIR2114-201ENST00000516645 80 ntBASIC3.37□□□□□ -1.87
PF4V1P10720 AC009812.2-201ENST00000517657 457 ntBASIC3.37□□□□□ -1.87
PF4V1P10720 AC109329.1-201ENST00000518744 317 ntBASIC3.37□□□□□ -1.87
PF4V1P10720 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.37□□□□□ -1.87
PF4V1P10720 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms