Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC006512.1-201ENST00000468816 291 ntBASIC0.76□□□□□ -2.29
TNFP01375 AL133373.1-201ENST00000497098 94 ntBASIC0.76□□□□□ -2.29
TNFP01375 SNORA25.11-201ENST00000515935 105 ntBASIC0.76□□□□□ -2.29
TNFP01375 SNORA48.9-201ENST00000516419 162 ntBASIC0.76□□□□□ -2.29
TNFP01375 NACAP3-201ENST00000552100 481 ntBASIC0.76□□□□□ -2.29
TNFP01375 AL359314.1-201ENST00000616913 261 ntBASIC0.76□□□□□ -2.29
TNFP01375 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.76□□□□□ -2.29
TNFP01375 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.75□□□□□ -2.29
TNFP01375 NACAP2-201ENST00000318548 624 ntBASIC0.75□□□□□ -2.29
TNFP01375 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
TNFP01375 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
TNFP01375 RNU6-271P-201ENST00000363858 105 ntBASIC0.75□□□□□ -2.29
TNFP01375 RN7SKP61-201ENST00000410642 295 ntBASIC0.75□□□□□ -2.29
TNFP01375 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.75□□□□□ -2.29
TNFP01375 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.75□□□□□ -2.29
TNFP01375 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.75□□□□□ -2.29
TNFP01375 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.75□□□□□ -2.29
TNFP01375 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.75□□□□□ -2.29
TNFP01375 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
TNFP01375 PSMA3P-201ENST00000555485 635 ntBASIC0.75□□□□□ -2.29
TNFP01375 AC133485.1-201ENST00000567176 124 ntBASIC0.75□□□□□ -2.29
TNFP01375 AC138907.6-201ENST00000568401 126 ntBASIC0.75□□□□□ -2.29
TNFP01375 AC002400.1-201ENST00000569310 726 ntBASIC0.75□□□□□ -2.29
TNFP01375 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.75□□□□□ -2.29
TNFP01375 NIFKP6-201ENST00000598115 845 ntBASIC0.75□□□□□ -2.29
TNFP01375 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.75□□□□□ -2.29
TNFP01375 AC010900.2-201ENST00000604508 210 ntBASIC0.75□□□□□ -2.29
TNFP01375 AC004492.1-201ENST00000607036 742 ntBASIC0.75□□□□□ -2.29
TNFP01375 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
TNFP01375 LINC00216-201ENST00000623548 1126 ntBASIC0.75□□□□□ -2.29
TNFP01375 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
TNFP01375 RNU6-1222P-201ENST00000384615 107 ntBASIC0.74□□□□□ -2.29
TNFP01375 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.74□□□□□ -2.29
TNFP01375 RNU2-33P-201ENST00000410344 192 ntBASIC0.74□□□□□ -2.29
TNFP01375 NDUFS5P4-201ENST00000412983 318 ntBASIC0.74□□□□□ -2.29
TNFP01375 CBX3P6-201ENST00000430257 527 ntBASIC0.74□□□□□ -2.29
TNFP01375 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.74□□□□□ -2.29
TNFP01375 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.74□□□□□ -2.29
TNFP01375 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.74□□□□□ -2.29
TNFP01375 RPL39P28-201ENST00000465655 155 ntBASIC0.74□□□□□ -2.29
TNFP01375 RPL30P7-201ENST00000479312 323 ntBASIC0.74□□□□□ -2.29
TNFP01375 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.74□□□□□ -2.29
TNFP01375 BOLA3P3-201ENST00000505182 232 ntBASIC0.74□□□□□ -2.29
TNFP01375 OR5B19P-201ENST00000531766 928 ntBASIC0.74□□□□□ -2.29
TNFP01375 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.74□□□□□ -2.29
TNFP01375 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.74□□□□□ -2.29
TNFP01375 AC013244.2-201ENST00000603396 103 ntBASIC0.74□□□□□ -2.29
TNFP01375 AC092953.2-201ENST00000608000 699 ntBASIC0.74□□□□□ -2.29
TNFP01375 AC004067.1-201ENST00000608733 700 ntBASIC0.74□□□□□ -2.29
TNFP01375 AL355472.4-201ENST00000610233 626 ntBASIC0.74□□□□□ -2.29
TNFP01375 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
TNFP01375 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.74□□□□□ -2.29
TNFP01375 AP003485.1-201ENST00000625093 753 ntBASIC0.74□□□□□ -2.29
TNFP01375 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.74□□□□□ -2.29
TNFP01375 AC009950.2-201ENST00000636548 183 ntBASIC0.74□□□□□ -2.29
TNFP01375 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.73□□□□□ -2.29
TNFP01375 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
TNFP01375 MIR597-201ENST00000384968 97 ntBASIC0.73□□□□□ -2.29
TNFP01375 AL591034.2-201ENST00000402839 359 ntBASIC0.73□□□□□ -2.29
TNFP01375 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.73□□□□□ -2.29
TNFP01375 AC097463.2-201ENST00000421074 142 ntBASIC0.73□□□□□ -2.29
TNFP01375 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.73□□□□□ -2.29
TNFP01375 MTCO3P17-201ENST00000443775 513 ntBASIC0.73□□□□□ -2.29
TNFP01375 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.73□□□□□ -2.29
TNFP01375 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.73□□□□□ -2.29
TNFP01375 UBL5P1-201ENST00000507979 193 ntBASIC0.73□□□□□ -2.29
TNFP01375 AC025465.3-201ENST00000510570 311 ntBASIC0.73□□□□□ -2.29
TNFP01375 DEFB108E-201ENST00000524692 240 ntBASIC0.73□□□□□ -2.29
TNFP01375 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.73□□□□□ -2.29
TNFP01375 AC124293.1-201ENST00000530034 493 ntBASIC0.73□□□□□ -2.29
TNFP01375 AC136932.1-201ENST00000574771 208 ntBASIC0.73□□□□□ -2.29
TNFP01375 BNIP3P23-201ENST00000599655 511 ntBASIC0.73□□□□□ -2.29
TNFP01375 GAS5-AS1-201ENST00000602767 694 ntBASIC0.73□□□□□ -2.29
TNFP01375 CYP2C61P-201ENST00000604072 290 ntBASIC0.73□□□□□ -2.29
TNFP01375 AC069304.2-201ENST00000605154 435 ntBASIC0.73□□□□□ -2.29
TNFP01375 AC083865.1-201ENST00000636634 831 ntBASIC0.73□□□□□ -2.29
TNFP01375 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.73□□□□□ -2.29
TNFP01375 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.73□□□□□ -2.29
TNFP01375 SNORA51.6-201ENST00000384151 125 ntBASIC0.72□□□□□ -2.29
TNFP01375 AL121978.1-201ENST00000402778 359 ntBASIC0.72□□□□□ -2.29
TNFP01375 AL591212.2-201ENST00000433923 257 ntBASIC0.72□□□□□ -2.29
TNFP01375 PRPS1P1-201ENST00000445305 876 ntBASIC0.72□□□□□ -2.29
TNFP01375 RPS26P55-201ENST00000471178 356 ntBASIC0.72□□□□□ -2.29
TNFP01375 AC021382.1-201ENST00000483523 359 ntBASIC0.72□□□□□ -2.29
TNFP01375 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.72□□□□□ -2.29
TNFP01375 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.72□□□□□ -2.29
TNFP01375 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.72□□□□□ -2.29
TNFP01375 AC006199.1-201ENST00000548728 219 ntBASIC0.72□□□□□ -2.29
TNFP01375 MIR4714-201ENST00000580728 77 ntBASIC0.72□□□□□ -2.29
TNFP01375 AL590095.2-201ENST00000604136 117 ntBASIC0.72□□□□□ -2.29
TNFP01375 AC091152.3-201ENST00000604227 325 ntBASIC0.72□□□□□ -2.29
TNFP01375 ELOCP5-201ENST00000604924 333 ntBASIC0.72□□□□□ -2.29
TNFP01375 AL020996.3-201ENST00000606617 222 ntBASIC0.72□□□□□ -2.29
TNFP01375 DUSP12P1-201ENST00000612874 516 ntBASIC0.72□□□□□ -2.29
TNFP01375 MTND1P37-201ENST00000636562 264 ntBASIC0.72□□□□□ -2.29
TNFP01375 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
TNFP01375 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
TNFP01375 RNA5SP327-201ENST00000362494 101 ntBASIC0.71□□□□□ -2.3
TNFP01375 RNU1-23P-201ENST00000363361 144 ntBASIC0.71□□□□□ -2.3
TNFP01375 RNU6-26P-201ENST00000383985 107 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms