Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 AC092798.1-201ENST00000458542 409 ntBASIC4.14□□□□□ -1.75
PRAMEF1O95521 RN7SKP210-201ENST00000459176 261 ntBASIC4.14□□□□□ -1.75
PRAMEF1O95521 RPS29P27-201ENST00000463711 170 ntBASIC4.14□□□□□ -1.75
PRAMEF1O95521 TRBVB-201ENST00000477100 408 ntBASIC4.14□□□□□ -1.75
PRAMEF1O95521 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.14□□□□□ -1.75
PRAMEF1O95521 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.14□□□□□ -1.75
PRAMEF1O95521 AC074250.1-201ENST00000511117 192 ntBASIC4.14□□□□□ -1.75
PRAMEF1O95521 SNORA70.16-201ENST00000516390 95 ntBASIC4.14□□□□□ -1.75
PRAMEF1O95521 RNU6-572P-201ENST00000516724 80 ntBASIC4.14□□□□□ -1.75
PRAMEF1O95521 RNU6-570P-201ENST00000517051 105 ntBASIC4.14□□□□□ -1.75
PRAMEF1O95521 MRPL49P2-201ENST00000521066 465 ntBASIC4.14□□□□□ -1.75
PRAMEF1O95521 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PRAMEF1O95521 CYCSP29-201ENST00000533731 318 ntBASIC4.14□□□□□ -1.75
PRAMEF1O95521 AC007375.1-201ENST00000554513 578 ntBASIC4.14□□□□□ -1.75
PRAMEF1O95521 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.14□□□□□ -1.75
PRAMEF1O95521 SDR42E1P4-201ENST00000620894 481 ntBASIC4.14□□□□□ -1.75
PRAMEF1O95521 AP000560.1-201ENST00000624150 1937 ntBASIC4.14□□□□□ -1.75
PRAMEF1O95521 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRAMEF1O95521 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRAMEF1O95521 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
PRAMEF1O95521 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.14□□□□□ -1.75
PRAMEF1O95521 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PRAMEF1O95521 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRAMEF1O95521 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
PRAMEF1O95521 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.13□□□□□ -1.75
PRAMEF1O95521 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PRAMEF1O95521 Z82217.1-201ENST00000625157 8149 ntBASIC4.13□□□□□ -1.75
PRAMEF1O95521 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
PRAMEF1O95521 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
PRAMEF1O95521 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PRAMEF1O95521 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PRAMEF1O95521 MTND5P6-201ENST00000422338 1798 ntBASIC4.13□□□□□ -1.75
PRAMEF1O95521 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PRAMEF1O95521 Y_RNA.27-201ENST00000362540 103 ntBASIC4.13□□□□□ -1.75
PRAMEF1O95521 RNU6-428P-201ENST00000362942 107 ntBASIC4.13□□□□□ -1.75
PRAMEF1O95521 Y_RNA.477-201ENST00000384352 108 ntBASIC4.13□□□□□ -1.75
PRAMEF1O95521 Y_RNA.478-201ENST00000384358 107 ntBASIC4.13□□□□□ -1.75
PRAMEF1O95521 MIR93-201ENST00000385024 80 ntBASIC4.13□□□□□ -1.75
PRAMEF1O95521 RNU2-68P-201ENST00000410878 191 ntBASIC4.13□□□□□ -1.75
PRAMEF1O95521 RNU6-130P-201ENST00000411112 103 ntBASIC4.13□□□□□ -1.75
PRAMEF1O95521 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.13□□□□□ -1.75
PRAMEF1O95521 AC004552.1-201ENST00000419089 348 ntBASIC4.13□□□□□ -1.75
PRAMEF1O95521 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PRAMEF1O95521 MTND4LP30-201ENST00000454092 297 ntBASIC4.13□□□□□ -1.75
PRAMEF1O95521 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.13□□□□□ -1.75
PRAMEF1O95521 RPS26P3-201ENST00000470205 348 ntBASIC4.13□□□□□ -1.75
PRAMEF1O95521 AC090543.2-201ENST00000483963 348 ntBASIC4.13□□□□□ -1.75
PRAMEF1O95521 AC004057.1-201ENST00000485827 348 ntBASIC4.13□□□□□ -1.75
PRAMEF1O95521 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.13□□□□□ -1.75
PRAMEF1O95521 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.13□□□□□ -1.75
PRAMEF1O95521 RNU6-377P-201ENST00000515965 102 ntBASIC4.13□□□□□ -1.75
PRAMEF1O95521 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.13□□□□□ -1.75
PRAMEF1O95521 TRAV28-201ENST00000557548 323 ntBASIC4.13□□□□□ -1.75
PRAMEF1O95521 AC006557.5-201ENST00000603126 811 ntBASIC4.13□□□□□ -1.75
PRAMEF1O95521 AC023043.4-201ENST00000612081 449 ntBASIC4.13□□□□□ -1.75
PRAMEF1O95521 Z75746.1-201ENST00000440243 2080 ntBASIC4.13□□□□□ -1.75
PRAMEF1O95521 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PRAMEF1O95521 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PRAMEF1O95521 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRAMEF1O95521 AC018529.3-201ENST00000624212 2254 ntBASIC4.12□□□□□ -1.75
PRAMEF1O95521 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
PRAMEF1O95521 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRAMEF1O95521 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PRAMEF1O95521 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.12□□□□□ -1.75
PRAMEF1O95521 RNU6-212P-201ENST00000362642 104 ntBASIC4.12□□□□□ -1.75
PRAMEF1O95521 RNU6-227P-201ENST00000362865 103 ntBASIC4.12□□□□□ -1.75
PRAMEF1O95521 RNU5E-7P-201ENST00000365290 117 ntBASIC4.12□□□□□ -1.75
PRAMEF1O95521 RNU6-209P-201ENST00000384118 107 ntBASIC4.12□□□□□ -1.75
PRAMEF1O95521 RNU6-708P-201ENST00000384217 107 ntBASIC4.12□□□□□ -1.75
PRAMEF1O95521 AC098614.2-201ENST00000426040 255 ntBASIC4.12□□□□□ -1.75
PRAMEF1O95521 AL353748.1-201ENST00000440753 474 ntBASIC4.12□□□□□ -1.75
PRAMEF1O95521 RN7SL585P-201ENST00000470538 280 ntBASIC4.12□□□□□ -1.75
PRAMEF1O95521 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
PRAMEF1O95521 AC006517.1-201ENST00000480485 328 ntBASIC4.12□□□□□ -1.75
PRAMEF1O95521 RN7SL604P-201ENST00000492589 296 ntBASIC4.12□□□□□ -1.75
PRAMEF1O95521 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.12□□□□□ -1.75
PRAMEF1O95521 SNORA31.9-201ENST00000516429 84 ntBASIC4.12□□□□□ -1.75
PRAMEF1O95521 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.12□□□□□ -1.75
PRAMEF1O95521 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.12□□□□□ -1.75
PRAMEF1O95521 AL020997.2-201ENST00000602607 184 ntBASIC4.12□□□□□ -1.75
PRAMEF1O95521 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRAMEF1O95521 AC008785.1-201ENST00000624475 456 ntBASIC4.12□□□□□ -1.75
PRAMEF1O95521 U4.7-201ENST00000638126 106 ntBASIC4.12□□□□□ -1.75
PRAMEF1O95521 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.12□□□□□ -1.75
PRAMEF1O95521 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.12□□□□□ -1.75
PRAMEF1O95521 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRAMEF1O95521 AL136964.1-201ENST00000622038 2990 ntBASIC4.12□□□□□ -1.75
PRAMEF1O95521 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRAMEF1O95521 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.11□□□□□ -1.75
PRAMEF1O95521 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PRAMEF1O95521 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PRAMEF1O95521 AC008568.2-201ENST00000623862 2313 ntBASIC4.11□□□□□ -1.75
PRAMEF1O95521 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRAMEF1O95521 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.11□□□□□ -1.75
PRAMEF1O95521 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRAMEF1O95521 Y_RNA.105-201ENST00000363182 111 ntBASIC4.11□□□□□ -1.75
PRAMEF1O95521 MIR190B-201ENST00000401119 79 ntBASIC4.11□□□□□ -1.75
PRAMEF1O95521 RPS29P13-201ENST00000402041 169 ntBASIC4.11□□□□□ -1.75
PRAMEF1O95521 RNU6-121P-201ENST00000410525 99 ntBASIC4.11□□□□□ -1.75
PRAMEF1O95521 RPL17P36-201ENST00000420302 549 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms