Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 Y_RNA.290-201ENST00000364879 114 ntBASIC4.96□□□□□ -1.62
GFRA3O60609 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.96□□□□□ -1.62
GFRA3O60609 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA3O60609 AC126124.2-201ENST00000413542 321 ntBASIC4.96□□□□□ -1.62
GFRA3O60609 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.96□□□□□ -1.62
GFRA3O60609 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA3O60609 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.96□□□□□ -1.62
GFRA3O60609 AL354714.3-201ENST00000447284 493 ntBASIC4.96□□□□□ -1.62
GFRA3O60609 PRSS3P4-201ENST00000453323 162 ntBASIC4.96□□□□□ -1.62
GFRA3O60609 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.96□□□□□ -1.62
GFRA3O60609 MRPL49P2-201ENST00000521066 465 ntBASIC4.96□□□□□ -1.62
GFRA3O60609 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.96□□□□□ -1.62
GFRA3O60609 MIR5588-201ENST00000581890 63 ntBASIC4.96□□□□□ -1.62
GFRA3O60609 MIR3124-201ENST00000582636 67 ntBASIC4.96□□□□□ -1.62
GFRA3O60609 BMS1P21-201ENST00000634565 365 ntBASIC4.96□□□□□ -1.62
GFRA3O60609 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA3O60609 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA3O60609 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA3O60609 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA3O60609 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA3O60609 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC4.96□□□□□ -1.62
GFRA3O60609 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
GFRA3O60609 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
GFRA3O60609 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.96□□□□□ -1.62
GFRA3O60609 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
GFRA3O60609 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
GFRA3O60609 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA3O60609 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA3O60609 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA3O60609 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
GFRA3O60609 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.95□□□□□ -1.62
GFRA3O60609 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
GFRA3O60609 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC4.95□□□□□ -1.62
GFRA3O60609 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC4.95□□□□□ -1.62
GFRA3O60609 AC239868.2-201ENST00000564237 4527 ntBASIC4.95□□□□□ -1.62
GFRA3O60609 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
GFRA3O60609 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
GFRA3O60609 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
GFRA3O60609 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
GFRA3O60609 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
GFRA3O60609 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.95□□□□□ -1.62
GFRA3O60609 RNU6-1249P-201ENST00000363237 111 ntBASIC4.95□□□□□ -1.62
GFRA3O60609 AL031003.1-201ENST00000404229 172 ntBASIC4.95□□□□□ -1.62
GFRA3O60609 SSXP9-201ENST00000417503 292 ntBASIC4.95□□□□□ -1.62
GFRA3O60609 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.95□□□□□ -1.62
GFRA3O60609 snoU13.29-201ENST00000459370 104 ntBASIC4.95□□□□□ -1.62
GFRA3O60609 RPL23AP62-201ENST00000463396 453 ntBASIC4.95□□□□□ -1.62
GFRA3O60609 AL591473.1-201ENST00000464297 313 ntBASIC4.95□□□□□ -1.62
GFRA3O60609 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.95□□□□□ -1.62
GFRA3O60609 AC008739.3-201ENST00000603262 127 ntBASIC4.95□□□□□ -1.62
GFRA3O60609 AC025946.2-201ENST00000603398 234 ntBASIC4.95□□□□□ -1.62
GFRA3O60609 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.95□□□□□ -1.62
GFRA3O60609 MIR6864-201ENST00000617935 70 ntBASIC4.95□□□□□ -1.62
GFRA3O60609 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.95□□□□□ -1.62
GFRA3O60609 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.95□□□□□ -1.62
GFRA3O60609 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
GFRA3O60609 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.95□□□□□ -1.62
GFRA3O60609 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
GFRA3O60609 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
GFRA3O60609 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC4.95□□□□□ -1.62
GFRA3O60609 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
GFRA3O60609 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.95□□□□□ -1.62
GFRA3O60609 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
GFRA3O60609 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
GFRA3O60609 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC4.95□□□□□ -1.62
GFRA3O60609 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.94□□□□□ -1.62
GFRA3O60609 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
GFRA3O60609 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
GFRA3O60609 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
GFRA3O60609 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
GFRA3O60609 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GFRA3O60609 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.94□□□□□ -1.62
GFRA3O60609 OR56B2P-202ENST00000641377 2453 ntBASIC4.94□□□□□ -1.62
GFRA3O60609 RNU6-675P-201ENST00000384236 104 ntBASIC4.94□□□□□ -1.62
GFRA3O60609 RNU6-339P-201ENST00000384310 107 ntBASIC4.94□□□□□ -1.62
GFRA3O60609 RNA5SP136-201ENST00000410906 107 ntBASIC4.94□□□□□ -1.62
GFRA3O60609 AC016831.4-201ENST00000438302 307 ntBASIC4.94□□□□□ -1.62
GFRA3O60609 AL353689.1-201ENST00000438895 199 ntBASIC4.94□□□□□ -1.62
GFRA3O60609 REG1CP-206ENST00000447469 496 ntBASIC4.94□□□□□ -1.62
GFRA3O60609 AC012671.1-201ENST00000451912 203 ntBASIC4.94□□□□□ -1.62
GFRA3O60609 SNORA59A-201ENST00000459326 152 ntBASIC4.94□□□□□ -1.62
GFRA3O60609 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GFRA3O60609 RNU6-365P-201ENST00000517113 106 ntBASIC4.94□□□□□ -1.62
GFRA3O60609 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.94□□□□□ -1.62
GFRA3O60609 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
GFRA3O60609 AC006115.2-201ENST00000596823 202 ntBASIC4.94□□□□□ -1.62
GFRA3O60609 AL161798.1-201ENST00000604630 131 ntBASIC4.94□□□□□ -1.62
GFRA3O60609 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.94□□□□□ -1.62
GFRA3O60609 RNA5SP196-201ENST00000625967 102 ntBASIC4.94□□□□□ -1.62
GFRA3O60609 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.94□□□□□ -1.62
GFRA3O60609 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
GFRA3O60609 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
GFRA3O60609 THAP12P5-201ENST00000405864 2275 ntBASIC4.94□□□□□ -1.62
GFRA3O60609 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.94□□□□□ -1.62
GFRA3O60609 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.94□□□□□ -1.62
GFRA3O60609 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GFRA3O60609 AL672296.1-201ENST00000427780 2158 ntBASIC4.94□□□□□ -1.62
GFRA3O60609 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GFRA3O60609 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
GFRA3O60609 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms