Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.06□□□□□ -2.24
HMGB3O15347 AL022400.1-201ENST00000423946 935 ntBASIC1.06□□□□□ -2.24
HMGB3O15347 AC245517.4-201ENST00000448601 281 ntBASIC1.06□□□□□ -2.24
HMGB3O15347 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.06□□□□□ -2.24
HMGB3O15347 HMGB1P28-201ENST00000507778 552 ntBASIC1.06□□□□□ -2.24
HMGB3O15347 RNU6-583P-201ENST00000516012 92 ntBASIC1.06□□□□□ -2.24
HMGB3O15347 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.06□□□□□ -2.24
HMGB3O15347 SLC2A13P1-201ENST00000531560 322 ntBASIC1.06□□□□□ -2.24
HMGB3O15347 AP003034.1-201ENST00000534621 422 ntBASIC1.06□□□□□ -2.24
HMGB3O15347 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.06□□□□□ -2.24
HMGB3O15347 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.06□□□□□ -2.24
HMGB3O15347 OR6C7P-201ENST00000547875 934 ntBASIC1.06□□□□□ -2.24
HMGB3O15347 AC136619.2-201ENST00000563361 631 ntBASIC1.06□□□□□ -2.24
HMGB3O15347 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.06□□□□□ -2.24
HMGB3O15347 AC068338.1-201ENST00000565567 176 ntBASIC1.06□□□□□ -2.24
HMGB3O15347 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.06□□□□□ -2.24
HMGB3O15347 MIR4435-1-201ENST00000582552 80 ntBASIC1.06□□□□□ -2.24
HMGB3O15347 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC1.06□□□□□ -2.24
HMGB3O15347 BNIP3P27-201ENST00000599991 412 ntBASIC1.06□□□□□ -2.24
HMGB3O15347 MIR6798-201ENST00000612887 67 ntBASIC1.06□□□□□ -2.24
HMGB3O15347 AC021755.4-201ENST00000616620 456 ntBASIC1.06□□□□□ -2.24
HMGB3O15347 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.05□□□□□ -2.24
HMGB3O15347 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.05□□□□□ -2.24
HMGB3O15347 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
HMGB3O15347 SNORA48.1-201ENST00000390879 135 ntBASIC1.05□□□□□ -2.24
HMGB3O15347 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.05□□□□□ -2.24
HMGB3O15347 RPL23AP36-201ENST00000413895 458 ntBASIC1.05□□□□□ -2.24
HMGB3O15347 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.05□□□□□ -2.24
HMGB3O15347 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.05□□□□□ -2.24
HMGB3O15347 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.05□□□□□ -2.24
HMGB3O15347 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.05□□□□□ -2.24
HMGB3O15347 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.05□□□□□ -2.24
HMGB3O15347 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.05□□□□□ -2.24
HMGB3O15347 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.05□□□□□ -2.24
HMGB3O15347 AC079448.1-201ENST00000449377 373 ntBASIC1.05□□□□□ -2.24
HMGB3O15347 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.05□□□□□ -2.24
HMGB3O15347 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.05□□□□□ -2.24
HMGB3O15347 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.05□□□□□ -2.24
HMGB3O15347 AC023194.1-201ENST00000493084 308 ntBASIC1.05□□□□□ -2.24
HMGB3O15347 AC026414.1-201ENST00000504046 698 ntBASIC1.05□□□□□ -2.24
HMGB3O15347 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.05□□□□□ -2.24
HMGB3O15347 AC093809.1-201ENST00000509155 340 ntBASIC1.05□□□□□ -2.24
HMGB3O15347 MTCYBP43-201ENST00000513621 740 ntBASIC1.05□□□□□ -2.24
HMGB3O15347 RNU6-902P-201ENST00000517212 91 ntBASIC1.05□□□□□ -2.24
HMGB3O15347 AC090821.2-201ENST00000523552 176 ntBASIC1.05□□□□□ -2.24
HMGB3O15347 AP004247.1-201ENST00000531556 1289 ntBASIC1.05□□□□□ -2.24
HMGB3O15347 AC023538.1-201ENST00000534576 736 ntBASIC1.05□□□□□ -2.24
HMGB3O15347 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.05□□□□□ -2.24
HMGB3O15347 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.05□□□□□ -2.24
HMGB3O15347 BBIP1P1-201ENST00000602999 279 ntBASIC1.05□□□□□ -2.24
HMGB3O15347 DPPA3P3-201ENST00000603842 430 ntBASIC1.05□□□□□ -2.24
HMGB3O15347 AL022345.1-201ENST00000607292 135 ntBASIC1.05□□□□□ -2.24
HMGB3O15347 AL050343.2-201ENST00000607338 280 ntBASIC1.05□□□□□ -2.24
HMGB3O15347 AC098614.4-201ENST00000607601 462 ntBASIC1.05□□□□□ -2.24
HMGB3O15347 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.05□□□□□ -2.24
HMGB3O15347 AC097460.3-201ENST00000623099 442 ntBASIC1.05□□□□□ -2.24
HMGB3O15347 U6.99-201ENST00000637524 83 ntBASIC1.05□□□□□ -2.24
HMGB3O15347 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
HMGB3O15347 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
HMGB3O15347 RNU4-13P-201ENST00000364019 141 ntBASIC1.04□□□□□ -2.24
HMGB3O15347 RNU6-439P-201ENST00000384188 106 ntBASIC1.04□□□□□ -2.24
HMGB3O15347 RSL24D1P4-201ENST00000400938 484 ntBASIC1.04□□□□□ -2.24
HMGB3O15347 SRIP3-201ENST00000413200 219 ntBASIC1.04□□□□□ -2.24
HMGB3O15347 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.04□□□□□ -2.24
HMGB3O15347 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.04□□□□□ -2.24
HMGB3O15347 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.04□□□□□ -2.24
HMGB3O15347 AL158053.1-201ENST00000441503 453 ntBASIC1.04□□□□□ -2.24
HMGB3O15347 SNORD97-201ENST00000459187 142 ntBASIC1.04□□□□□ -2.24
HMGB3O15347 RPS29P21-201ENST00000496272 170 ntBASIC1.04□□□□□ -2.24
HMGB3O15347 AC109927.2-201ENST00000506416 303 ntBASIC1.04□□□□□ -2.24
HMGB3O15347 SNORA31.3-201ENST00000516029 96 ntBASIC1.04□□□□□ -2.24
HMGB3O15347 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
HMGB3O15347 YWHAZP1-201ENST00000556286 722 ntBASIC1.04□□□□□ -2.24
HMGB3O15347 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.04□□□□□ -2.24
HMGB3O15347 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC1.04□□□□□ -2.24
HMGB3O15347 AC096772.1-201ENST00000609146 564 ntBASIC1.04□□□□□ -2.24
HMGB3O15347 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.04□□□□□ -2.24
HMGB3O15347 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
HMGB3O15347 AC010149.2-201ENST00000637608 315 ntBASIC1.04□□□□□ -2.24
HMGB3O15347 MTND4P21-201ENST00000453886 1357 ntBASIC1.04□□□□□ -2.24
HMGB3O15347 OR5T3-201ENST00000303059 1023 ntBASIC1.03□□□□□ -2.24
HMGB3O15347 CBX3P1-201ENST00000325243 554 ntBASIC1.03□□□□□ -2.24
HMGB3O15347 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
HMGB3O15347 MIR618-201ENST00000385287 98 ntBASIC1.03□□□□□ -2.24
HMGB3O15347 U8.13-201ENST00000390842 128 ntBASIC1.03□□□□□ -2.24
HMGB3O15347 SNORA11-201ENST00000408789 128 ntBASIC1.03□□□□□ -2.24
HMGB3O15347 RNU2-32P-201ENST00000411193 191 ntBASIC1.03□□□□□ -2.24
HMGB3O15347 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.03□□□□□ -2.24
HMGB3O15347 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.03□□□□□ -2.24
HMGB3O15347 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.03□□□□□ -2.24
HMGB3O15347 MRPL35P3-201ENST00000421557 364 ntBASIC1.03□□□□□ -2.24
HMGB3O15347 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.03□□□□□ -2.24
HMGB3O15347 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.03□□□□□ -2.24
HMGB3O15347 AC079776.3-201ENST00000450665 370 ntBASIC1.03□□□□□ -2.24
HMGB3O15347 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.03□□□□□ -2.24
HMGB3O15347 snoU13.9-201ENST00000458927 103 ntBASIC1.03□□□□□ -2.24
HMGB3O15347 RPL37P6-201ENST00000460682 294 ntBASIC1.03□□□□□ -2.24
HMGB3O15347 AL121594.1-201ENST00000475906 575 ntBASIC1.03□□□□□ -2.24
HMGB3O15347 FAM92A1P2-202ENST00000504766 877 ntBASIC1.03□□□□□ -2.24
HMGB3O15347 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms