Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
SMKR1H3BMG3 RN7SKP24-201ENST00000515888 284 ntBASIC1.69□□□□□ -2.14
SMKR1H3BMG3 RNU2-53P-201ENST00000516257 147 ntBASIC1.69□□□□□ -2.14
SMKR1H3BMG3 RNA5SP320-201ENST00000516263 124 ntBASIC1.69□□□□□ -2.14
SMKR1H3BMG3 SNORA67.7-201ENST00000516664 135 ntBASIC1.69□□□□□ -2.14
SMKR1H3BMG3 RNU6-586P-201ENST00000517265 104 ntBASIC1.69□□□□□ -2.14
SMKR1H3BMG3 NDUFA5P6-201ENST00000542110 379 ntBASIC1.69□□□□□ -2.14
SMKR1H3BMG3 IMMP1LP2-201ENST00000552954 492 ntBASIC1.69□□□□□ -2.14
SMKR1H3BMG3 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.69□□□□□ -2.14
SMKR1H3BMG3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.69□□□□□ -2.14
SMKR1H3BMG3 AL139286.2-201ENST00000606838 396 ntBASIC1.69□□□□□ -2.14
SMKR1H3BMG3 uc_338.15-201ENST00000615470 191 ntBASIC1.69□□□□□ -2.14
SMKR1H3BMG3 AC027807.2-201ENST00000616099 408 ntBASIC1.69□□□□□ -2.14
SMKR1H3BMG3 AC131280.1-202ENST00000624067 4211 ntBASIC1.69□□□□□ -2.14
SMKR1H3BMG3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.69□□□□□ -2.14
SMKR1H3BMG3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SMKR1H3BMG3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
SMKR1H3BMG3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.69□□□□□ -2.14
SMKR1H3BMG3 ZNF658B-202ENST00000615961 3375 ntBASIC1.68□□□□□ -2.14
SMKR1H3BMG3 SNORD14B-201ENST00000364533 90 ntBASIC1.68□□□□□ -2.14
SMKR1H3BMG3 RNU1-140P-201ENST00000365040 165 ntBASIC1.68□□□□□ -2.14
SMKR1H3BMG3 MIR186-201ENST00000384988 86 ntBASIC1.68□□□□□ -2.14
SMKR1H3BMG3 MIR10A-201ENST00000385043 110 ntBASIC1.68□□□□□ -2.14
SMKR1H3BMG3 AL360182.1-201ENST00000397433 468 ntBASIC1.68□□□□□ -2.14
SMKR1H3BMG3 AL512604.1-201ENST00000404812 257 ntBASIC1.68□□□□□ -2.14
SMKR1H3BMG3 UBE2V1P10-201ENST00000414685 269 ntBASIC1.68□□□□□ -2.14
SMKR1H3BMG3 USP9YP27-201ENST00000418455 438 ntBASIC1.68□□□□□ -2.14
SMKR1H3BMG3 AC007283.2-201ENST00000424739 197 ntBASIC1.68□□□□□ -2.14
SMKR1H3BMG3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.68□□□□□ -2.14
SMKR1H3BMG3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.68□□□□□ -2.14
SMKR1H3BMG3 RPS24P1-201ENST00000438550 371 ntBASIC1.68□□□□□ -2.14
SMKR1H3BMG3 RNA5SP233-201ENST00000459153 113 ntBASIC1.68□□□□□ -2.14
SMKR1H3BMG3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.68□□□□□ -2.14
SMKR1H3BMG3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.68□□□□□ -2.14
SMKR1H3BMG3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.68□□□□□ -2.14
SMKR1H3BMG3 AC026436.1-201ENST00000510537 270 ntBASIC1.68□□□□□ -2.14
SMKR1H3BMG3 AC108078.2-201ENST00000510750 236 ntBASIC1.68□□□□□ -2.14
SMKR1H3BMG3 RNU6-123P-201ENST00000516163 102 ntBASIC1.68□□□□□ -2.14
SMKR1H3BMG3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.68□□□□□ -2.14
SMKR1H3BMG3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.68□□□□□ -2.14
SMKR1H3BMG3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.68□□□□□ -2.14
SMKR1H3BMG3 AC093249.1-201ENST00000567049 203 ntBASIC1.68□□□□□ -2.14
SMKR1H3BMG3 MTCYBP33-201ENST00000575007 1130 ntBASIC1.68□□□□□ -2.14
SMKR1H3BMG3 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC1.68□□□□□ -2.14
SMKR1H3BMG3 AC026271.5-201ENST00000577873 130 ntBASIC1.68□□□□□ -2.14
SMKR1H3BMG3 MIR4287-201ENST00000579398 78 ntBASIC1.68□□□□□ -2.14
SMKR1H3BMG3 DEFB131E-202ENST00000602581 683 ntBASIC1.68□□□□□ -2.14
SMKR1H3BMG3 ELOCP5-201ENST00000604924 333 ntBASIC1.68□□□□□ -2.14
SMKR1H3BMG3 AC024933.1-201ENST00000608472 348 ntBASIC1.68□□□□□ -2.14
SMKR1H3BMG3 SDR42E1P4-201ENST00000620894 481 ntBASIC1.68□□□□□ -2.14
SMKR1H3BMG3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.68□□□□□ -2.14
SMKR1H3BMG3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SMKR1H3BMG3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
SMKR1H3BMG3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC1.68□□□□□ -2.14
SMKR1H3BMG3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC1.68□□□□□ -2.14
SMKR1H3BMG3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC1.67□□□□□ -2.14
SMKR1H3BMG3 AP006437.1-201ENST00000641440 3685 ntBASIC1.67□□□□□ -2.14
SMKR1H3BMG3 ZNF702P-202ENST00000434269 1966 ntBASIC1.67□□□□□ -2.14
SMKR1H3BMG3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SMKR1H3BMG3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.67□□□□□ -2.14
SMKR1H3BMG3 RNU6-859P-201ENST00000362728 107 ntBASIC1.67□□□□□ -2.14
SMKR1H3BMG3 U3.13-201ENST00000364804 214 ntBASIC1.67□□□□□ -2.14
SMKR1H3BMG3 RNU5E-5P-201ENST00000365379 116 ntBASIC1.67□□□□□ -2.14
SMKR1H3BMG3 RNU6-622P-201ENST00000384272 103 ntBASIC1.67□□□□□ -2.14
SMKR1H3BMG3 SNORA51.11-201ENST00000384442 131 ntBASIC1.67□□□□□ -2.14
SMKR1H3BMG3 MIR7-3-201ENST00000384898 110 ntBASIC1.67□□□□□ -2.14
SMKR1H3BMG3 MIR27B-201ENST00000385129 97 ntBASIC1.67□□□□□ -2.14
SMKR1H3BMG3 SNORA40.19-201ENST00000390846 128 ntBASIC1.67□□□□□ -2.14
SMKR1H3BMG3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SMKR1H3BMG3 CISD1P1-201ENST00000393907 327 ntBASIC1.67□□□□□ -2.14
SMKR1H3BMG3 RNU2-39P-201ENST00000410604 198 ntBASIC1.67□□□□□ -2.14
SMKR1H3BMG3 ELOCP4-201ENST00000420090 333 ntBASIC1.67□□□□□ -2.14
SMKR1H3BMG3 AL593851.1-201ENST00000426171 157 ntBASIC1.67□□□□□ -2.14
SMKR1H3BMG3 MED13P1-201ENST00000428342 171 ntBASIC1.67□□□□□ -2.14
SMKR1H3BMG3 ARL5AP4-201ENST00000430731 512 ntBASIC1.67□□□□□ -2.14
SMKR1H3BMG3 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.67□□□□□ -2.14
SMKR1H3BMG3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.67□□□□□ -2.14
SMKR1H3BMG3 CALM1P1-201ENST00000442082 433 ntBASIC1.67□□□□□ -2.14
SMKR1H3BMG3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.67□□□□□ -2.14
SMKR1H3BMG3 MTND5P2-201ENST00000442927 1142 ntBASIC1.67□□□□□ -2.14
SMKR1H3BMG3 AP000936.2-201ENST00000447151 681 ntBASIC1.67□□□□□ -2.14
SMKR1H3BMG3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.67□□□□□ -2.14
SMKR1H3BMG3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.67□□□□□ -2.14
SMKR1H3BMG3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.67□□□□□ -2.14
SMKR1H3BMG3 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.67□□□□□ -2.14
SMKR1H3BMG3 AC117522.1-201ENST00000509821 380 ntBASIC1.67□□□□□ -2.14
SMKR1H3BMG3 SNORA3.4-201ENST00000515969 96 ntBASIC1.67□□□□□ -2.14
SMKR1H3BMG3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.67□□□□□ -2.14
SMKR1H3BMG3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.67□□□□□ -2.14
SMKR1H3BMG3 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.67□□□□□ -2.14
SMKR1H3BMG3 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.67□□□□□ -2.14
SMKR1H3BMG3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.67□□□□□ -2.14
SMKR1H3BMG3 AL020997.2-201ENST00000602607 184 ntBASIC1.67□□□□□ -2.14
SMKR1H3BMG3 SNRPGP17-201ENST00000603780 214 ntBASIC1.67□□□□□ -2.14
SMKR1H3BMG3 U4.3-201ENST00000621047 82 ntBASIC1.67□□□□□ -2.14
SMKR1H3BMG3 SCARNA4-202ENST00000625402 129 ntBASIC1.67□□□□□ -2.14
SMKR1H3BMG3 AP000553.5-201ENST00000641933 54 ntBASIC1.67□□□□□ -2.14
SMKR1H3BMG3 AC008555.8-201ENST00000623602 2168 ntBASIC1.66□□□□□ -2.14
SMKR1H3BMG3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
SMKR1H3BMG3 AC007336.1-201ENST00000576365 3828 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms