Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC004520.1-201ENST00000608362 1413 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SRRM4A7MD48 MTND4P14-201ENST00000435799 1354 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SRRM4A7MD48 MIR22-201ENST00000362190 85 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 RNU6-166P-201ENST00000384371 107 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 RNU6-748P-201ENST00000384648 107 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 MIR23B-201ENST00000384832 97 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 MIR7-3-201ENST00000384898 110 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 MIR147B-201ENST00000390185 80 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 U3.19-201ENST00000390893 196 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 RNU6-780P-201ENST00000391030 104 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 U3.26-201ENST00000391236 204 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 MTCO3P40-201ENST00000392516 676 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 RNU4-55P-201ENST00000410731 137 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 RN7SKP58-201ENST00000411010 305 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 Y_RNA.623-201ENST00000411128 95 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.42□□□□□ -2.02
SRRM4A7MD48 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.42□□□□□ -2.02
SRRM4A7MD48 RPS3AP14-201ENST00000483907 780 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 AC019235.1-201ENST00000503847 207 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 AC117522.3-201ENST00000507974 584 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 RBBP4P6-201ENST00000508098 202 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 AC074250.1-201ENST00000511117 192 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 MRPS36P2-201ENST00000512569 299 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 RNA5SP385-201ENST00000515947 110 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 FAM92A1P1-201ENST00000528023 890 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SRRM4A7MD48 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.42□□□□□ -2.02
SRRM4A7MD48 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.42□□□□□ -2.02
SRRM4A7MD48 AC012507.3-201ENST00000603556 477 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 AC024220.1-201ENST00000603675 484 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 AP000787.2-201ENST00000604432 568 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
SRRM4A7MD48 AL449363.1-201ENST00000617815 186 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 AL359880.1-201ENST00000621879 266 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 AC011155.2-201ENST00000623202 216 ntBASIC2.42□□□□□ -2.02
SRRM4A7MD48 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.42□□□□□ -2.02
SRRM4A7MD48 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
SRRM4A7MD48 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SRRM4A7MD48 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SRRM4A7MD48 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.41□□□□□ -2.02
SRRM4A7MD48 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
SRRM4A7MD48 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
SRRM4A7MD48 Y_RNA.1-201ENST00000352915 104 ntBASIC2.41□□□□□ -2.02
SRRM4A7MD48 Y_RNA.9-201ENST00000362354 101 ntBASIC2.41□□□□□ -2.02
SRRM4A7MD48 SNORA63.1-201ENST00000362493 131 ntBASIC2.41□□□□□ -2.02
SRRM4A7MD48 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.41□□□□□ -2.02
SRRM4A7MD48 Y_RNA.450-201ENST00000384198 113 ntBASIC2.41□□□□□ -2.02
SRRM4A7MD48 SNORA54-201ENST00000384281 123 ntBASIC2.41□□□□□ -2.02
SRRM4A7MD48 RNY3P14-201ENST00000384309 102 ntBASIC2.41□□□□□ -2.02
SRRM4A7MD48 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SRRM4A7MD48 CIR1P3-201ENST00000405137 479 ntBASIC2.41□□□□□ -2.02
SRRM4A7MD48 AL590002.1-201ENST00000406554 418 ntBASIC2.41□□□□□ -2.02
SRRM4A7MD48 RAP1BP3-201ENST00000407180 549 ntBASIC2.41□□□□□ -2.02
SRRM4A7MD48 BMS1P22-201ENST00000414726 313 ntBASIC2.41□□□□□ -2.02
SRRM4A7MD48 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.41□□□□□ -2.02
SRRM4A7MD48 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.41□□□□□ -2.02
SRRM4A7MD48 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.41□□□□□ -2.02
SRRM4A7MD48 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.41□□□□□ -2.02
SRRM4A7MD48 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.41□□□□□ -2.02
SRRM4A7MD48 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.41□□□□□ -2.02
SRRM4A7MD48 AC107626.1-201ENST00000471084 183 ntBASIC2.41□□□□□ -2.02
SRRM4A7MD48 AC092989.1-201ENST00000481235 277 ntBASIC2.41□□□□□ -2.02
SRRM4A7MD48 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.41□□□□□ -2.02
SRRM4A7MD48 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.41□□□□□ -2.02
SRRM4A7MD48 AP001893.2-201ENST00000526949 202 ntBASIC2.41□□□□□ -2.02
SRRM4A7MD48 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.41□□□□□ -2.02
SRRM4A7MD48 AK6P1-201ENST00000540219 478 ntBASIC2.41□□□□□ -2.02
SRRM4A7MD48 GLYCAM1-201ENST00000546596 285 ntBASIC2.41□□□□□ -2.02
SRRM4A7MD48 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.41□□□□□ -2.02
SRRM4A7MD48 MIR5004-201ENST00000579078 107 ntBASIC2.41□□□□□ -2.02
SRRM4A7MD48 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.41□□□□□ -2.02
SRRM4A7MD48 AL137843.1-201ENST00000605078 385 ntBASIC2.41□□□□□ -2.02
SRRM4A7MD48 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.41□□□□□ -2.02
SRRM4A7MD48 SCARNA4-202ENST00000625402 129 ntBASIC2.41□□□□□ -2.02
SRRM4A7MD48 MIR3688-2-201ENST00000636963 87 ntBASIC2.41□□□□□ -2.02
SRRM4A7MD48 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
SRRM4A7MD48 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
SRRM4A7MD48 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.41□□□□□ -2.02
SRRM4A7MD48 ZNF680P1-201ENST00000436625 1469 ntBASIC2.4□□□□□ -2.02
SRRM4A7MD48 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SRRM4A7MD48 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.4□□□□□ -2.03
SRRM4A7MD48 AC138393.1-203ENST00000327086 343 ntBASIC2.4□□□□□ -2.03
SRRM4A7MD48 RNA5SP72-201ENST00000364442 117 ntBASIC2.4□□□□□ -2.03
SRRM4A7MD48 Y_RNA.409-201ENST00000383990 98 ntBASIC2.4□□□□□ -2.03
SRRM4A7MD48 RNU6-1029P-201ENST00000384109 107 ntBASIC2.4□□□□□ -2.03
SRRM4A7MD48 RNU6-1179P-201ENST00000384667 107 ntBASIC2.4□□□□□ -2.03
SRRM4A7MD48 MIR627-201ENST00000384979 97 ntBASIC2.4□□□□□ -2.03
SRRM4A7MD48 RNU6-550P-201ENST00000391057 101 ntBASIC2.4□□□□□ -2.03
SRRM4A7MD48 U3.37-201ENST00000408528 213 ntBASIC2.4□□□□□ -2.03
SRRM4A7MD48 RNA5SP344-201ENST00000411081 104 ntBASIC2.4□□□□□ -2.03
SRRM4A7MD48 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.4□□□□□ -2.03
SRRM4A7MD48 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.4□□□□□ -2.03
SRRM4A7MD48 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.4□□□□□ -2.03
SRRM4A7MD48 AC093151.1-201ENST00000427711 313 ntBASIC2.4□□□□□ -2.03
SRRM4A7MD48 AC104332.2-201ENST00000429959 156 ntBASIC2.4□□□□□ -2.03
SRRM4A7MD48 AC000111.3-201ENST00000433478 193 ntBASIC2.4□□□□□ -2.03
SRRM4A7MD48 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.4□□□□□ -2.03
SRRM4A7MD48 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms