Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AC006512.1-201ENST00000468816 291 ntBASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 MTCYBP16-201ENST00000509187 1129 ntBASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 AC136628.3-201ENST00000521868 290 ntBASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 CYB5AP5-201ENST00000549779 389 ntBASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 uc_338.14-201ENST00000613162 166 ntBASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 MTND5P31-201ENST00000419366 1374 ntBASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 AC138393.1-203ENST00000327086 343 ntBASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 SNORD115-3-201ENST00000363100 82 ntBASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 RNU1-23P-201ENST00000363361 144 ntBASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 RNU6-884P-201ENST00000363889 107 ntBASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 RNU6-167P-201ENST00000384292 106 ntBASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 SNORD51-201ENST00000384320 80 ntBASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 MIR561-201ENST00000385216 97 ntBASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 MIR29C-201ENST00000385231 88 ntBASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 RNU11-3P-201ENST00000391111 133 ntBASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 AC244023.1-201ENST00000426884 112 ntBASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 CYP2C59P-201ENST00000457790 269 ntBASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 CYCSP27-201ENST00000527643 293 ntBASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 AC008088.1-201ENST00000580993 280 ntBASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 AL391646.1-201ENST00000603860 190 ntBASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 AC242498.1-201ENST00000604134 111 ntBASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 FTX_3.1-201ENST00000610451 147 ntBASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 AC040896.1-201ENST00000613819 479 ntBASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 AC243994.1-201ENST00000618627 109 ntBASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 AC073569.3-201ENST00000619055 682 ntBASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 AC009318.4-201ENST00000620496 486 ntBASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 AC243829.3-201ENST00000622177 108 ntBASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 MIR5087-201ENST00000635826 76 ntBASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.31□□□□□ -2.36
CPSF4LA6NMK7 U3.8-201ENST00000363675 217 ntBASIC0.3□□□□□ -2.36
CPSF4LA6NMK7 RNU6-1151P-201ENST00000384684 107 ntBASIC0.3□□□□□ -2.36
CPSF4LA6NMK7 MIR649-201ENST00000384843 97 ntBASIC0.3□□□□□ -2.36
CPSF4LA6NMK7 MIR514A1-201ENST00000385133 98 ntBASIC0.3□□□□□ -2.36
CPSF4LA6NMK7 AL031577.2-201ENST00000404133 280 ntBASIC0.3□□□□□ -2.36
CPSF4LA6NMK7 AC139712.2-201ENST00000424302 339 ntBASIC0.3□□□□□ -2.36
CPSF4LA6NMK7 NANOGP2-201ENST00000435391 727 ntBASIC0.3□□□□□ -2.36
CPSF4LA6NMK7 AC098831.1-201ENST00000440661 216 ntBASIC0.3□□□□□ -2.36
CPSF4LA6NMK7 MTCO1P53-201ENST00000441633 699 ntBASIC0.3□□□□□ -2.36
CPSF4LA6NMK7 HSPE1P13-201ENST00000451143 297 ntBASIC0.3□□□□□ -2.36
CPSF4LA6NMK7 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CPSF4LA6NMK7 AC015724.1-201ENST00000478577 156 ntBASIC0.3□□□□□ -2.36
CPSF4LA6NMK7 AC067942.3-201ENST00000512025 362 ntBASIC0.3□□□□□ -2.36
CPSF4LA6NMK7 SNORA48.9-201ENST00000516419 162 ntBASIC0.3□□□□□ -2.36
CPSF4LA6NMK7 SNORA31.22-201ENST00000517204 135 ntBASIC0.3□□□□□ -2.36
CPSF4LA6NMK7 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.3□□□□□ -2.36
CPSF4LA6NMK7 AC124293.1-201ENST00000530034 493 ntBASIC0.3□□□□□ -2.36
CPSF4LA6NMK7 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC0.3□□□□□ -2.36
CPSF4LA6NMK7 AC009268.1-201ENST00000561352 1203 ntBASIC0.3□□□□□ -2.36
CPSF4LA6NMK7 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.3□□□□□ -2.36
CPSF4LA6NMK7 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.3□□□□□ -2.36
CPSF4LA6NMK7 AC091965.5-201ENST00000624785 342 ntBASIC0.3□□□□□ -2.36
CPSF4LA6NMK7 U6.107-201ENST00000637108 79 ntBASIC0.3□□□□□ -2.36
CPSF4LA6NMK7 ELL2P3-201ENST00000457883 1602 ntBASIC0.3□□□□□ -2.36
CPSF4LA6NMK7 AC110491.1-201ENST00000562191 2010 ntBASIC0.3□□□□□ -2.36
CPSF4LA6NMK7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
CPSF4LA6NMK7 RNU2-43P-201ENST00000410306 190 ntBASIC0.29□□□□□ -2.36
CPSF4LA6NMK7 PNRC2P1-201ENST00000423940 420 ntBASIC0.29□□□□□ -2.36
CPSF4LA6NMK7 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.29□□□□□ -2.36
CPSF4LA6NMK7 KATNBL1P6-201ENST00000453433 915 ntBASIC0.29□□□□□ -2.36
CPSF4LA6NMK7 DUXAP8-207ENST00000456786 622 ntBASIC0.29□□□□□ -2.36
CPSF4LA6NMK7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.29□□□□□ -2.36
CPSF4LA6NMK7 RNU6-197P-201ENST00000516680 100 ntBASIC0.29□□□□□ -2.36
CPSF4LA6NMK7 SNORA31.17-201ENST00000516953 127 ntBASIC0.29□□□□□ -2.36
CPSF4LA6NMK7 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.29□□□□□ -2.36
CPSF4LA6NMK7 CYP3A52P-201ENST00000563326 91 ntBASIC0.29□□□□□ -2.36
CPSF4LA6NMK7 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.29□□□□□ -2.36
CPSF4LA6NMK7 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.29□□□□□ -2.36
CPSF4LA6NMK7 MTCO2P2-201ENST00000591258 225 ntBASIC0.29□□□□□ -2.36
CPSF4LA6NMK7 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.29□□□□□ -2.36
CPSF4LA6NMK7 AC005261.5-201ENST00000596280 355 ntBASIC0.29□□□□□ -2.36
CPSF4LA6NMK7 AL713866.2-201ENST00000603579 219 ntBASIC0.29□□□□□ -2.36
CPSF4LA6NMK7 AL109659.3-201ENST00000624985 950 ntBASIC0.29□□□□□ -2.36
CPSF4LA6NMK7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.29□□□□□ -2.36
CPSF4LA6NMK7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
CPSF4LA6NMK7 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 RNU5A-1-201ENST00000362698 116 ntBASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 RNU6-741P-201ENST00000383889 107 ntBASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 RNU6-140P-201ENST00000384566 108 ntBASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 SNORA48.1-201ENST00000390879 135 ntBASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 MIR1262-201ENST00000408276 93 ntBASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 RNA5SP247-201ENST00000411181 105 ntBASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 AC078974.1-201ENST00000411597 223 ntBASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 AL591212.2-201ENST00000433923 257 ntBASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 BET1P1-201ENST00000482276 359 ntBASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 AL049874.1-201ENST00000489560 388 ntBASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 AC108078.1-201ENST00000508073 725 ntBASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.28□□□□□ -2.36
CPSF4LA6NMK7 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms