Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 RNA5SP179-201ENST00000517284 121 ntBASIC4.07□□□□□ -1.76
CCDC66A2RUB6 IGHV3-76-201ENST00000522465 295 ntBASIC4.07□□□□□ -1.76
CCDC66A2RUB6 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC66A2RUB6 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC66A2RUB6 AC011494.1-201ENST00000596454 237 ntBASIC4.07□□□□□ -1.76
CCDC66A2RUB6 AC011890.2-201ENST00000613393 294 ntBASIC4.07□□□□□ -1.76
CCDC66A2RUB6 PLCE1P1-201ENST00000622094 305 ntBASIC4.07□□□□□ -1.76
CCDC66A2RUB6 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC66A2RUB6 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC66A2RUB6 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC66A2RUB6 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC66A2RUB6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC66A2RUB6 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC66A2RUB6 AC007785.2-201ENST00000598627 1916 ntBASIC4.07□□□□□ -1.76
CCDC66A2RUB6 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CCDC66A2RUB6 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC66A2RUB6 RNU1-75P-201ENST00000347264 129 ntBASIC4.06□□□□□ -1.76
CCDC66A2RUB6 Y_RNA.5-201ENST00000362334 102 ntBASIC4.06□□□□□ -1.76
CCDC66A2RUB6 RNU6-384P-201ENST00000364900 104 ntBASIC4.06□□□□□ -1.76
CCDC66A2RUB6 MIR517A-201ENST00000385001 87 ntBASIC4.06□□□□□ -1.76
CCDC66A2RUB6 AL022722.2-201ENST00000402519 180 ntBASIC4.06□□□□□ -1.76
CCDC66A2RUB6 AL592148.1-201ENST00000413568 445 ntBASIC4.06□□□□□ -1.76
CCDC66A2RUB6 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC66A2RUB6 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC66A2RUB6 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC66A2RUB6 USMG5P1-201ENST00000425964 177 ntBASIC4.06□□□□□ -1.76
CCDC66A2RUB6 Z82210.1-201ENST00000440037 231 ntBASIC4.06□□□□□ -1.76
CCDC66A2RUB6 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC66A2RUB6 AL035666.1-201ENST00000446195 348 ntBASIC4.06□□□□□ -1.76
CCDC66A2RUB6 CECR9-201ENST00000453421 199 ntBASIC4.06□□□□□ -1.76
CCDC66A2RUB6 RPS23P3-201ENST00000470993 430 ntBASIC4.06□□□□□ -1.76
CCDC66A2RUB6 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC66A2RUB6 RN7SKP209-201ENST00000516888 304 ntBASIC4.06□□□□□ -1.76
CCDC66A2RUB6 AC009902.1-201ENST00000519351 183 ntBASIC4.06□□□□□ -1.76
CCDC66A2RUB6 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC66A2RUB6 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC66A2RUB6 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC66A2RUB6 MIR3690-201ENST00000580266 75 ntBASIC4.06□□□□□ -1.76
CCDC66A2RUB6 AC053481.4-201ENST00000583164 216 ntBASIC4.06□□□□□ -1.76
CCDC66A2RUB6 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC66A2RUB6 AP001836.1-201ENST00000604675 523 ntBASIC4.06□□□□□ -1.76
CCDC66A2RUB6 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.06□□□□□ -1.76
CCDC66A2RUB6 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC66A2RUB6 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC66A2RUB6 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC66A2RUB6 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC66A2RUB6 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC66A2RUB6 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CCDC66A2RUB6 Y_RNA.151-201ENST00000363566 112 ntBASIC4.05□□□□□ -1.76
CCDC66A2RUB6 SNORA57.1-201ENST00000391227 145 ntBASIC4.05□□□□□ -1.76
CCDC66A2RUB6 RNU2-71P-201ENST00000411395 189 ntBASIC4.05□□□□□ -1.76
CCDC66A2RUB6 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC66A2RUB6 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.05□□□□□ -1.76
CCDC66A2RUB6 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC66A2RUB6 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CCDC66A2RUB6 TRBV12-2-201ENST00000489763 344 ntBASIC4.05□□□□□ -1.76
CCDC66A2RUB6 HMGN1P11-201ENST00000508668 303 ntBASIC4.05□□□□□ -1.76
CCDC66A2RUB6 RN7SKP295-201ENST00000517264 153 ntBASIC4.05□□□□□ -1.76
CCDC66A2RUB6 AL137849.1-201ENST00000604767 169 ntBASIC4.05□□□□□ -1.76
CCDC66A2RUB6 AL160281.1-201ENST00000605307 311 ntBASIC4.05□□□□□ -1.76
CCDC66A2RUB6 AC123912.5-201ENST00000605470 343 ntBASIC4.05□□□□□ -1.76
CCDC66A2RUB6 AL591034.3-201ENST00000605511 685 ntBASIC4.05□□□□□ -1.76
CCDC66A2RUB6 AC006023.2-201ENST00000609916 167 ntBASIC4.05□□□□□ -1.76
CCDC66A2RUB6 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC66A2RUB6 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
CCDC66A2RUB6 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC66A2RUB6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC66A2RUB6 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC66A2RUB6 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC66A2RUB6 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC66A2RUB6 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC66A2RUB6 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
CCDC66A2RUB6 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC66A2RUB6 SNORD14B-201ENST00000364533 90 ntBASIC4.04□□□□□ -1.76
CCDC66A2RUB6 RNA5SP515-201ENST00000364570 118 ntBASIC4.04□□□□□ -1.76
CCDC66A2RUB6 Y_RNA.623-201ENST00000411128 95 ntBASIC4.04□□□□□ -1.76
CCDC66A2RUB6 AC018865.2-201ENST00000423631 129 ntBASIC4.04□□□□□ -1.76
CCDC66A2RUB6 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC66A2RUB6 AL691449.1-201ENST00000426570 421 ntBASIC4.04□□□□□ -1.76
CCDC66A2RUB6 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC66A2RUB6 TBCAP1-201ENST00000436520 327 ntBASIC4.04□□□□□ -1.76
CCDC66A2RUB6 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC66A2RUB6 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC66A2RUB6 AL583843.1-201ENST00000456070 346 ntBASIC4.04□□□□□ -1.76
CCDC66A2RUB6 AC018437.1-201ENST00000492214 406 ntBASIC4.04□□□□□ -1.76
CCDC66A2RUB6 RNU6-307P-201ENST00000516743 106 ntBASIC4.04□□□□□ -1.76
CCDC66A2RUB6 RNA5SP165-201ENST00000517142 115 ntBASIC4.04□□□□□ -1.76
CCDC66A2RUB6 AC025755.1-201ENST00000521306 278 ntBASIC4.04□□□□□ -1.76
CCDC66A2RUB6 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC66A2RUB6 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC66A2RUB6 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC66A2RUB6 VN1R85P-201ENST00000601587 426 ntBASIC4.04□□□□□ -1.76
CCDC66A2RUB6 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.04□□□□□ -1.76
CCDC66A2RUB6 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC66A2RUB6 MIR492-201ENST00000638676 116 ntBASIC4.04□□□□□ -1.76
CCDC66A2RUB6 AC058791.1-201ENST00000608412 3198 ntBASIC4.04□□□□□ -1.76
CCDC66A2RUB6 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC66A2RUB6 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC66A2RUB6 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC66A2RUB6 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms