Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 ELOCP24-201ENST00000456370 334 ntBASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 AC110768.1-201ENST00000509222 400 ntBASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 SNORD59.2-201ENST00000516873 68 ntBASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 AC109479.2-201ENST00000517842 174 ntBASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 YPEL5P3-201ENST00000547227 352 ntBASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 AC109446.1-201ENST00000566172 220 ntBASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 MIR4273-201ENST00000582824 84 ntBASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 MIR3171-201ENST00000584270 74 ntBASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 AC011494.1-201ENST00000596454 237 ntBASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 AP000787.2-201ENST00000604432 568 ntBASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 Y_RNA.812-201ENST00000610788 101 ntBASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 Y_RNA.784-201ENST00000613803 101 ntBASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 Y_RNA.787-201ENST00000616522 101 ntBASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 Y_RNA.780-201ENST00000617336 101 ntBASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 Y_RNA.801-201ENST00000619005 101 ntBASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 MIR7702-201ENST00000621931 59 ntBASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 RNU6-858P-201ENST00000362436 107 ntBASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 Y_RNA.197-201ENST00000364004 102 ntBASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 Y_RNA.216-201ENST00000364205 93 ntBASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 SNORD42.2-201ENST00000365570 69 ntBASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 SNORD96B-201ENST00000386148 79 ntBASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 RNU6-308P-201ENST00000390957 107 ntBASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 AL513475.1-201ENST00000406602 315 ntBASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 AL445433.1-201ENST00000457507 257 ntBASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 SNORD5.1-201ENST00000458800 75 ntBASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 RNU7-152P-201ENST00000458982 64 ntBASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 Y_RNA.631-201ENST00000459607 101 ntBASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 ACA59.1-201ENST00000515966 143 ntBASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 SCARNA16.2-201ENST00000516520 172 ntBASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 SCARNA13-201ENST00000516672 275 ntBASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 SNORA70.24-201ENST00000517233 118 ntBASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 AC010186.2-204ENST00000537668 439 ntBASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 AC020661.2-201ENST00000560114 134 ntBASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 CYP2C61P-201ENST00000604072 290 ntBASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 AL591516.1-201ENST00000611326 274 ntBASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 AC004852.3-201ENST00000614131 326 ntBASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CCDC163A0A0D9SF12 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 ADAM3A-203ENST00000461344 2157 ntBASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 MIR183-201ENST00000384958 110 ntBASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 RNA5SP146-201ENST00000410743 123 ntBASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 NDUFS5P4-201ENST00000412983 318 ntBASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 AC098831.1-201ENST00000440661 216 ntBASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 RPL23AP49-201ENST00000492925 468 ntBASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 RPS27AP10-201ENST00000496103 208 ntBASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 RNA5SP384-201ENST00000516615 116 ntBASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 RNU7-143P-201ENST00000516781 65 ntBASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 AP000867.2-201ENST00000532468 320 ntBASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 NACAP3-201ENST00000552100 481 ntBASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 AC087499.8-201ENST00000578406 226 ntBASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 MIR5047-201ENST00000579212 100 ntBASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 HMGN2P15-201ENST00000585707 270 ntBASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 AL451007.1-201ENST00000595491 289 ntBASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 AL139395.1-201ENST00000603662 160 ntBASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 AC098657.3-201ENST00000620434 263 ntBASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 AC090617.7-201ENST00000623952 126 ntBASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 AC138627.2-201ENST00000624202 601 ntBASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 SCARNA4-202ENST00000625402 129 ntBASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms