Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 MIR6826-201ENST00000617808 98 ntBASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 SNORA43.4-201ENST00000629559 138 ntBASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 TLK1P1-201ENST00000456760 2440 ntBASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 RNU1-100P-201ENST00000365255 165 ntBASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 Y_RNA.418-201ENST00000384029 102 ntBASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 MIR888-201ENST00000401186 77 ntBASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 Y_RNA.595-201ENST00000410403 105 ntBASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 RNU6-651P-201ENST00000411040 105 ntBASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 TBCAP2-201ENST00000416175 326 ntBASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 NDUFB4P6-201ENST00000436819 366 ntBASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 RN7SL319P-201ENST00000480656 221 ntBASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 RPS4XP22-201ENST00000480755 780 ntBASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 RN7SL97P-201ENST00000486780 299 ntBASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 SNORA40.9-201ENST00000515895 93 ntBASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 RN7SKP122-201ENST00000515923 296 ntBASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 RNA5SP34-201ENST00000516887 130 ntBASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 CYCSP23-201ENST00000519781 313 ntBASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 AP001485.1-201ENST00000604799 199 ntBASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 AC012468.1-201ENST00000604888 430 ntBASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 AC011921.3-201ENST00000605540 361 ntBASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 AC093799.2-201ENST00000610062 578 ntBASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 SDR42E1P1-201ENST00000611327 477 ntBASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 AL591926.8-201ENST00000616876 211 ntBASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.75□□□□□ -1.65
PCDHGA11Q9Y5H2 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 RNU6-704P-201ENST00000364162 103 ntBASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 SNORD50.2-201ENST00000365465 70 ntBASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 Y_RNA.383-201ENST00000383855 97 ntBASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 RNU6-918P-201ENST00000391219 106 ntBASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 RN7SKP61-201ENST00000410642 295 ntBASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 NDUFS5P4-201ENST00000412983 318 ntBASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 AC078809.1-201ENST00000427601 140 ntBASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 RPS26P39-201ENST00000469206 341 ntBASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 RN7SKP66-201ENST00000516681 231 ntBASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 NACAP3-201ENST00000552100 481 ntBASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 AC021231.3-201ENST00000558497 370 ntBASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 HSPE1P5-201ENST00000561489 272 ntBASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 MIR4691-201ENST00000583764 85 ntBASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 AL590240.4-201ENST00000616908 390 ntBASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 AC135776.4-201ENST00000624300 1904 ntBASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 AL359854.1-201ENST00000614203 1594 ntBASIC4.74□□□□□ -1.65
PCDHGA11Q9Y5H2 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 AC092268.1-201ENST00000342691 405 ntBASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 RNU6-50P-201ENST00000362356 103 ntBASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 SNORA51.1-201ENST00000363243 140 ntBASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 RNU6-884P-201ENST00000363889 107 ntBASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 RNU6-961P-201ENST00000363893 105 ntBASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 RNA5SP428-201ENST00000365129 132 ntBASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 RNU6-1280P-201ENST00000365211 107 ntBASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 Y_RNA.446-201ENST00000384178 104 ntBASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 RNU6-1081P-201ENST00000384537 107 ntBASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 MIR607-201ENST00000385241 96 ntBASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 FAR2P2-201ENST00000413041 594 ntBASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 RPL7AP28-201ENST00000464513 571 ntBASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 AC078918.1-201ENST00000498515 228 ntBASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 RNU7-200P-201ENST00000516105 62 ntBASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 IGLV2-28-201ENST00000520681 304 ntBASIC4.73□□□□□ -1.65
PCDHGA11Q9Y5H2 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms