Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 Y_RNA.184-201ENST00000363884 108 ntBASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 Y_RNA.301-201ENST00000364990 103 ntBASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 RNU6-805P-201ENST00000365643 106 ntBASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 XGY1-201ENST00000381172 446 ntBASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 Y_RNA.384-201ENST00000383909 102 ntBASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 MIR514A1-201ENST00000385133 98 ntBASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 MIR1290-201ENST00000408735 78 ntBASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 AC092809.3-201ENST00000415453 231 ntBASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 MRPS31P2-201ENST00000451581 518 ntBASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 RNU7-66P-201ENST00000459469 62 ntBASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 RPL37P6-201ENST00000460682 294 ntBASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 RPL21P93-201ENST00000480465 489 ntBASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 HMGN1P13-201ENST00000505795 138 ntBASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 AC104136.1-201ENST00000512969 394 ntBASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 APOOP4-201ENST00000513530 597 ntBASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 AC090136.1-201ENST00000520009 240 ntBASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 AC093027.1-201ENST00000546698 429 ntBASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 MIR4276-201ENST00000584832 70 ntBASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 AC002545.1-201ENST00000592511 181 ntBASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 AP001330.4-201ENST00000604350 154 ntBASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 AC113139.1-201ENST00000605049 239 ntBASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 CTHRC1P1-201ENST00000605383 469 ntBASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 AP002826.1-201ENST00000608835 315 ntBASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 U2.17-201ENST00000611454 95 ntBASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSX2IPQ9Y2D8 AC110774.1-201ENST00000623567 2018 ntBASIC3.65□□□□□ -1.82
SSX2IPQ9Y2D8 AC007656.2-201ENST00000624902 4547 ntBASIC3.65□□□□□ -1.82
SSX2IPQ9Y2D8 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.65□□□□□ -1.82
SSX2IPQ9Y2D8 Y_RNA.431-201ENST00000384086 102 ntBASIC3.65□□□□□ -1.83
SSX2IPQ9Y2D8 FAT1P1-201ENST00000406588 507 ntBASIC3.65□□□□□ -1.83
SSX2IPQ9Y2D8 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.65□□□□□ -1.83
SSX2IPQ9Y2D8 RNA5SP293-201ENST00000410527 113 ntBASIC3.65□□□□□ -1.83
SSX2IPQ9Y2D8 BX682237.1-201ENST00000415016 335 ntBASIC3.65□□□□□ -1.83
SSX2IPQ9Y2D8 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.65□□□□□ -1.83
SSX2IPQ9Y2D8 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.65□□□□□ -1.83
SSX2IPQ9Y2D8 AC008264.1-201ENST00000447612 367 ntBASIC3.65□□□□□ -1.83
SSX2IPQ9Y2D8 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.65□□□□□ -1.83
SSX2IPQ9Y2D8 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.65□□□□□ -1.83
SSX2IPQ9Y2D8 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.65□□□□□ -1.83
SSX2IPQ9Y2D8 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.65□□□□□ -1.83
SSX2IPQ9Y2D8 AL049874.1-201ENST00000489560 388 ntBASIC3.65□□□□□ -1.83
SSX2IPQ9Y2D8 SNORA31.8-201ENST00000516327 108 ntBASIC3.65□□□□□ -1.83
SSX2IPQ9Y2D8 AP001804.3-201ENST00000525146 880 ntBASIC3.65□□□□□ -1.83
SSX2IPQ9Y2D8 AC011602.1-201ENST00000546484 331 ntBASIC3.65□□□□□ -1.83
SSX2IPQ9Y2D8 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.65□□□□□ -1.83
SSX2IPQ9Y2D8 MIR3941-201ENST00000582572 103 ntBASIC3.65□□□□□ -1.83
SSX2IPQ9Y2D8 AC135507.2-201ENST00000612443 309 ntBASIC3.65□□□□□ -1.83
SSX2IPQ9Y2D8 uc_338.15-201ENST00000615470 191 ntBASIC3.65□□□□□ -1.83
SSX2IPQ9Y2D8 MIR7112-201ENST00000616126 65 ntBASIC3.65□□□□□ -1.83
SSX2IPQ9Y2D8 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
SSX2IPQ9Y2D8 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
SSX2IPQ9Y2D8 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SSX2IPQ9Y2D8 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 OR4G2P-202ENST00000641004 1759 ntBASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 RNU6-715P-201ENST00000365204 103 ntBASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 Y_RNA.474-201ENST00000384341 102 ntBASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 SNORA48.2-201ENST00000390926 124 ntBASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 RNA5SP219-201ENST00000390940 113 ntBASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 SNORA16.2-201ENST00000390991 127 ntBASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 AL139039.1-201ENST00000401900 692 ntBASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 RNU4-47P-201ENST00000410876 114 ntBASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 AC016831.2-201ENST00000417179 352 ntBASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 AL160275.3-201ENST00000423876 471 ntBASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 RPL27AP8-201ENST00000424277 446 ntBASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 AL356867.1-201ENST00000429623 299 ntBASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 AC233279.1-201ENST00000455300 423 ntBASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 RNU7-167P-201ENST00000459160 62 ntBASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 RPS27P29-201ENST00000463110 252 ntBASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 RPL7P5-201ENST00000471472 736 ntBASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 SCARNA15.2-201ENST00000516409 127 ntBASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 AP000889.2-201ENST00000532684 490 ntBASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 MTCO3P23-201ENST00000561363 289 ntBASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 MIR15A-201ENST00000607334 83 ntBASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 AL050343.2-201ENST00000607338 280 ntBASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms