Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 AC083982.1-201ENST00000485679 344 ntBASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 RN7SL558P-201ENST00000497468 299 ntBASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 ENPP7P9-201ENST00000514456 627 ntBASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 RN7SKP277-201ENST00000516895 283 ntBASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 AC015720.1-201ENST00000565251 277 ntBASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 AC022726.1-201ENST00000587475 207 ntBASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 AL391358.1-201ENST00000605342 190 ntBASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 AC015813.4-201ENST00000610469 179 ntBASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 MIR7703-201ENST00000620784 77 ntBASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 SNORA43.4-201ENST00000629559 138 ntBASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 AC099654.7-201ENST00000635788 2127 ntBASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 Y_RNA.163-201ENST00000363702 113 ntBASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 RPL21P17-201ENST00000397467 475 ntBASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 AC096649.2-201ENST00000416186 393 ntBASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 RNU6-521P-201ENST00000516663 105 ntBASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 RNU2-12P-201ENST00000517216 168 ntBASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 AP001880.2-201ENST00000538233 448 ntBASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 MIR5699-201ENST00000578903 90 ntBASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 AC131238.1-201ENST00000617135 328 ntBASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 AC027309.3-201ENST00000623419 351 ntBASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 MFSD8-216ENST00000641147 4009 ntBASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM35Q9UPQ4 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
TRIM35Q9UPQ4 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM35Q9UPQ4 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM35Q9UPQ4 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM35Q9UPQ4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC6.33□□□□□ -1.4
TRIM35Q9UPQ4 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM35Q9UPQ4 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
TRIM35Q9UPQ4 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM35Q9UPQ4 RNY3P5-201ENST00000384127 102 ntBASIC6.33□□□□□ -1.4
TRIM35Q9UPQ4 AL512633.1-201ENST00000399931 655 ntBASIC6.33□□□□□ -1.4
TRIM35Q9UPQ4 AC007738.1-201ENST00000413892 348 ntBASIC6.33□□□□□ -1.4
TRIM35Q9UPQ4 AL445687.1-201ENST00000439946 251 ntBASIC6.33□□□□□ -1.4
TRIM35Q9UPQ4 AC006445.2-201ENST00000510061 472 ntBASIC6.33□□□□□ -1.4
TRIM35Q9UPQ4 AL671862.1-201ENST00000515851 349 ntBASIC6.33□□□□□ -1.4
TRIM35Q9UPQ4 RN7SKP43-201ENST00000516173 320 ntBASIC6.33□□□□□ -1.4
TRIM35Q9UPQ4 AC105129.1-201ENST00000560250 297 ntBASIC6.33□□□□□ -1.4
TRIM35Q9UPQ4 CYP4A27P-201ENST00000567218 190 ntBASIC6.33□□□□□ -1.4
TRIM35Q9UPQ4 AL121932.1-201ENST00000605542 214 ntBASIC6.33□□□□□ -1.4
TRIM35Q9UPQ4 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM35Q9UPQ4 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
TRIM35Q9UPQ4 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM35Q9UPQ4 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
TRIM35Q9UPQ4 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM35Q9UPQ4 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM35Q9UPQ4 TLK1P1-201ENST00000456760 2440 ntBASIC6.33□□□□□ -1.4
TRIM35Q9UPQ4 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM35Q9UPQ4 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM35Q9UPQ4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
TRIM35Q9UPQ4 RNU6-1205P-201ENST00000363625 106 ntBASIC6.32□□□□□ -1.4
TRIM35Q9UPQ4 Y_RNA.220-201ENST00000364244 109 ntBASIC6.32□□□□□ -1.4
TRIM35Q9UPQ4 RNU6-1074P-201ENST00000383995 104 ntBASIC6.32□□□□□ -1.4
TRIM35Q9UPQ4 RNU6-72P-201ENST00000384285 79 ntBASIC6.32□□□□□ -1.4
TRIM35Q9UPQ4 MIR1302-5-201ENST00000408164 150 ntBASIC6.32□□□□□ -1.4
TRIM35Q9UPQ4 RNA5SP225-201ENST00000410874 135 ntBASIC6.32□□□□□ -1.4
TRIM35Q9UPQ4 AC243964.1-201ENST00000441814 261 ntBASIC6.32□□□□□ -1.4
TRIM35Q9UPQ4 AL078601.1-201ENST00000444542 271 ntBASIC6.32□□□□□ -1.4
TRIM35Q9UPQ4 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM35Q9UPQ4 SNRPCP3-201ENST00000474888 476 ntBASIC6.32□□□□□ -1.4
TRIM35Q9UPQ4 RNU6-709P-201ENST00000517257 104 ntBASIC6.32□□□□□ -1.4
TRIM35Q9UPQ4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM35Q9UPQ4 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM35Q9UPQ4 MIR5571-201ENST00000577998 113 ntBASIC6.32□□□□□ -1.4
TRIM35Q9UPQ4 MIR3667-201ENST00000581025 74 ntBASIC6.32□□□□□ -1.4
TRIM35Q9UPQ4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC6.32□□□□□ -1.4
TRIM35Q9UPQ4 AC099669.2-201ENST00000616549 437 ntBASIC6.32□□□□□ -1.4
TRIM35Q9UPQ4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC6.32□□□□□ -1.4
TRIM35Q9UPQ4 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM35Q9UPQ4 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM35Q9UPQ4 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM35Q9UPQ4 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM35Q9UPQ4 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM35Q9UPQ4 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms