Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC006386.2-201ENST00000624491 75 ntBASIC3.08□□□□□ -1.92
SIX4Q9UIU6 AC012005.1-201ENST00000624575 75 ntBASIC3.08□□□□□ -1.92
SIX4Q9UIU6 MTND5P42-201ENST00000637720 498 ntBASIC3.08□□□□□ -1.92
SIX4Q9UIU6 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.08□□□□□ -1.92
SIX4Q9UIU6 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SIX4Q9UIU6 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SIX4Q9UIU6 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.08□□□□□ -1.92
SIX4Q9UIU6 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.08□□□□□ -1.92
SIX4Q9UIU6 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SIX4Q9UIU6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SIX4Q9UIU6 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SIX4Q9UIU6 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.07□□□□□ -1.92
SIX4Q9UIU6 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.07□□□□□ -1.92
SIX4Q9UIU6 RNU1-35P-201ENST00000362782 153 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 RNU6-116P-201ENST00000384042 109 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 RNU6-38P-201ENST00000384085 107 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.07□□□□□ -1.92
SIX4Q9UIU6 CISD1P1-201ENST00000393907 327 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 RNU6-373P-201ENST00000411247 98 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 AL513331.1-201ENST00000411908 397 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 OR6C66P-201ENST00000414917 930 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 RPL27AP8-201ENST00000424277 446 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 SRIP2-201ENST00000428470 166 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 RPL21P40-201ENST00000428586 483 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 AC098614.3-201ENST00000438957 440 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 SNRPEP8-201ENST00000442866 260 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.07□□□□□ -1.92
SIX4Q9UIU6 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.07□□□□□ -1.92
SIX4Q9UIU6 PMCHL2-203ENST00000457791 237 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 SNRPFP3-201ENST00000457792 225 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 RNU6-333P-201ENST00000459117 107 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 HMGN2P26-201ENST00000463169 339 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 HMGN2P13-201ENST00000476476 274 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.07□□□□□ -1.92
SIX4Q9UIU6 HMGN1P12-201ENST00000499125 195 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 AC091951.2-201ENST00000500762 203 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 CCDC34P1-201ENST00000507441 517 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 MTND4LP22-201ENST00000508209 276 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.07□□□□□ -1.92
SIX4Q9UIU6 RNU6-1256P-201ENST00000516539 103 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 RNU6-677P-201ENST00000516914 101 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.07□□□□□ -1.92
SIX4Q9UIU6 RANP3-201ENST00000530970 276 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 AC107016.2-201ENST00000547968 190 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 AC079600.2-201ENST00000550076 130 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 AC106900.2-201ENST00000604994 317 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 AL670379.4-201ENST00000605279 254 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 AL357078.3-201ENST00000607528 618 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 Y_RNA.804-201ENST00000615262 101 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 AC090132.2-201ENST00000615881 347 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
SIX4Q9UIU6 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SIX4Q9UIU6 TPTE2P4-201ENST00000258589 1605 ntBASIC3.07□□□□□ -1.92
SIX4Q9UIU6 AC103710.2-202ENST00000641454 2853 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 RNU4-66P-201ENST00000365199 138 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 RNU6-817P-201ENST00000391083 104 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 SAR1AP2-201ENST00000392696 594 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 AL162578.1-201ENST00000406202 378 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 Y_RNA.615-201ENST00000410769 117 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 RNU4-46P-201ENST00000410818 138 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 RNU6-1148P-201ENST00000410992 104 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 RNU6-387P-201ENST00000411331 105 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.06□□□□□ -1.92
SIX4Q9UIU6 AL591212.2-201ENST00000433923 257 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.06□□□□□ -1.92
SIX4Q9UIU6 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.06□□□□□ -1.92
SIX4Q9UIU6 AC025750.2-201ENST00000442609 450 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.06□□□□□ -1.92
SIX4Q9UIU6 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.06□□□□□ -1.92
SIX4Q9UIU6 RPL21P99-201ENST00000480369 423 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 AP004217.1-201ENST00000480579 346 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 AC096576.1-201ENST00000489014 359 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.06□□□□□ -1.92
SIX4Q9UIU6 RN7SKP132-201ENST00000516001 208 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 SCARNA15.2-201ENST00000516409 127 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 RNU6-1038P-201ENST00000516516 104 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 SNORD59.2-201ENST00000516873 68 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.06□□□□□ -1.92
SIX4Q9UIU6 AC023050.3-201ENST00000541142 333 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 ADI1P3-201ENST00000549509 470 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 AC078814.3-201ENST00000553036 491 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 AL118558.2-201ENST00000556294 238 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 MIR3921-201ENST00000577308 85 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 LARP7P3-201ENST00000579888 337 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 AC018638.8-201ENST00000588755 281 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 AC002545.1-201ENST00000592511 181 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 LARP7P1-201ENST00000605576 316 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 RNU6-89P-201ENST00000606519 100 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 AC022893.3-201ENST00000607665 437 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.06□□□□□ -1.92
SIX4Q9UIU6 uc_338.34-201ENST00000617467 174 ntBASIC3.06□□□□□ -1.92
SIX4Q9UIU6 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
SIX4Q9UIU6 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.05□□□□□ -1.92
SIX4Q9UIU6 MTND4P12-201ENST00000498999 1377 ntBASIC3.05□□□□□ -1.92
SIX4Q9UIU6 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.05□□□□□ -1.92
SIX4Q9UIU6 CBX3P1-201ENST00000325243 554 ntBASIC3.05□□□□□ -1.92
SIX4Q9UIU6 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SIX4Q9UIU6 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SIX4Q9UIU6 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms