Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 RNU6-1219P-201ENST00000516143 112 ntBASIC5.19□□□□□ -1.58
LIMD1Q9UGP4 AC134698.5-201ENST00000519444 336 ntBASIC5.19□□□□□ -1.58
LIMD1Q9UGP4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC5.19□□□□□ -1.58
LIMD1Q9UGP4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC5.19□□□□□ -1.58
LIMD1Q9UGP4 DLEU2_6.2-201ENST00000620994 136 ntBASIC5.19□□□□□ -1.58
LIMD1Q9UGP4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.19□□□□□ -1.58
LIMD1Q9UGP4 MIR3529-201ENST00000637713 78 ntBASIC5.19□□□□□ -1.58
LIMD1Q9UGP4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LIMD1Q9UGP4 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.19□□□□□ -1.58
LIMD1Q9UGP4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
LIMD1Q9UGP4 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LIMD1Q9UGP4 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LIMD1Q9UGP4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 AC110491.1-201ENST00000562191 2010 ntBASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 RN7SKP153-201ENST00000365026 316 ntBASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 RNU6-1280P-201ENST00000365211 107 ntBASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 RNU6-1248P-201ENST00000391096 64 ntBASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 RNU6-1135P-201ENST00000411083 103 ntBASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 OOSP1P1-201ENST00000423265 274 ntBASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 AC004975.1-201ENST00000428733 208 ntBASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 AC244670.1-201ENST00000436879 112 ntBASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 AC098976.1-201ENST00000513014 541 ntBASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 AC005828.6-201ENST00000606610 232 ntBASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 AP005432.2-201ENST00000608162 586 ntBASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 MIR6853-201ENST00000619642 74 ntBASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 AC048347.1-201ENST00000624621 427 ntBASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC5.18□□□□□ -1.58
LIMD1Q9UGP4 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 ADAM5-202ENST00000399789 1942 ntBASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 RNU6-50P-201ENST00000362356 103 ntBASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 RNU6-873P-201ENST00000363833 107 ntBASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 RNU6-884P-201ENST00000363889 107 ntBASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 MIR589-201ENST00000385238 99 ntBASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 FTH1P15-201ENST00000406984 280 ntBASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 AC140479.3-201ENST00000418944 1126 ntBASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 AC024067.1-201ENST00000426199 223 ntBASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 RPL19P16-201ENST00000433839 588 ntBASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 AC010095.1-201ENST00000443543 144 ntBASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 AC078817.1-201ENST00000492623 435 ntBASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 AC023141.12-201ENST00000512399 199 ntBASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 Vault.1-201ENST00000516474 102 ntBASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 AC009163.5-201ENST00000575421 637 ntBASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 MIR4308-201ENST00000580634 81 ntBASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 AL359198.2-201ENST00000611836 194 ntBASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 AC068724.3-201ENST00000625906 87 ntBASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 AL450345.1-202ENST00000605741 3881 ntBASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
LIMD1Q9UGP4 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
LIMD1Q9UGP4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LIMD1Q9UGP4 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.16□□□□□ -1.58
LIMD1Q9UGP4 AC104623.2-202ENST00000623477 4002 ntBASIC5.16□□□□□ -1.58
LIMD1Q9UGP4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LIMD1Q9UGP4 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
LIMD1Q9UGP4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
LIMD1Q9UGP4 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
LIMD1Q9UGP4 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LIMD1Q9UGP4 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LIMD1Q9UGP4 OR56B2P-202ENST00000641377 2453 ntBASIC5.16□□□□□ -1.58
LIMD1Q9UGP4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
LIMD1Q9UGP4 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LIMD1Q9UGP4 Y_RNA.580-201ENST00000391004 95 ntBASIC5.16□□□□□ -1.58
LIMD1Q9UGP4 SNORA26.3-201ENST00000391119 136 ntBASIC5.16□□□□□ -1.58
LIMD1Q9UGP4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC5.16□□□□□ -1.58
LIMD1Q9UGP4 RPL23AP3-201ENST00000453844 468 ntBASIC5.16□□□□□ -1.58
LIMD1Q9UGP4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.16□□□□□ -1.58
LIMD1Q9UGP4 AL049830.2-201ENST00000480072 201 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms