Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 RNU6-1072P-201ENST00000384703 107 ntBASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 RNU6-443P-201ENST00000384780 107 ntBASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 U3.26-201ENST00000391236 204 ntBASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 AL139039.1-201ENST00000401900 692 ntBASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 RNU6-1328P-201ENST00000410938 106 ntBASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 RNA5SP111-201ENST00000411386 101 ntBASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 AC132479.1-201ENST00000449160 144 ntBASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 AL162395.1-201ENST00000457882 422 ntBASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 AC117522.3-201ENST00000507974 584 ntBASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 AC104806.1-201ENST00000508720 308 ntBASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 RNU1-104P-201ENST00000517280 175 ntBASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 OR4R1P-201ENST00000529879 463 ntBASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 LINC00933-203ENST00000559812 219 ntBASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 MIR5004-201ENST00000579078 107 ntBASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 MIR4775-201ENST00000581168 75 ntBASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 AL670379.4-201ENST00000605279 254 ntBASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 AC245008.1-201ENST00000608123 476 ntBASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 AC084757.4-201ENST00000616350 526 ntBASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.86□□□□□ -1.95
CPSF2Q9P2I0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 AL035425.3-201ENST00000564206 4996 ntBASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 MIR412-201ENST00000362142 91 ntBASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 SNORA67.1-201ENST00000364749 141 ntBASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 SNORA9.2-201ENST00000365361 133 ntBASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 Y_RNA.623-201ENST00000411128 95 ntBASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 PTGES3P4-201ENST00000426243 356 ntBASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 CALM2P2-201ENST00000428512 440 ntBASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 AL360271.2-201ENST00000447710 161 ntBASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 NIPA2P5-201ENST00000452282 464 ntBASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 BTF3P15-201ENST00000455606 336 ntBASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 AC022364.2-201ENST00000457963 554 ntBASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 RPS29P15-201ENST00000458329 171 ntBASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 GZMAP1-201ENST00000503054 631 ntBASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 SNORA31.11-201ENST00000516528 139 ntBASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 AL161756.2-201ENST00000604597 246 ntBASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 AC090115.4-201ENST00000609970 188 ntBASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 AC048344.4-201ENST00000619744 527 ntBASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 AC136475.10-201ENST00000620253 385 ntBASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 AC091953.5-201ENST00000622919 233 ntBASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 U6.114-201ENST00000636407 96 ntBASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CPSF2Q9P2I0 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 SNORD14B-201ENST00000364533 90 ntBASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 RNU4-48P-201ENST00000365559 182 ntBASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 RNU6-1083P-201ENST00000384022 107 ntBASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 MIR512-1-201ENST00000384913 84 ntBASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 RNU6-550P-201ENST00000391057 101 ntBASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 OR6C66P-201ENST00000414917 930 ntBASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 AC022018.1-201ENST00000430685 241 ntBASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 AC000111.3-201ENST00000433478 193 ntBASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 CR769767.1-201ENST00000436337 346 ntBASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 MTCO2P18-201ENST00000457151 658 ntBASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 RNU7-182P-201ENST00000459009 62 ntBASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 AL121769.1-201ENST00000469473 401 ntBASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 SCARNA13-201ENST00000516672 275 ntBASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 RNA5SP82-201ENST00000516707 92 ntBASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 SNORA31.18-201ENST00000517043 134 ntBASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 MIR4429-201ENST00000580105 73 ntBASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 MIR3944-201ENST00000581277 108 ntBASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 AC011890.2-201ENST00000613393 294 ntBASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 AC009090.3-201ENST00000616553 565 ntBASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 AC010338.1-201ENST00000621823 717 ntBASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 SEPT14P19-203ENST00000633205 211 ntBASIC2.84□□□□□ -1.95
CPSF2Q9P2I0 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
CPSF2Q9P2I0 AC004944.1-201ENST00000517807 3059 ntBASIC2.84□□□□□ -1.96
CPSF2Q9P2I0 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms