Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 MIR22-201ENST00000362190 85 ntBASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 SNORA32.2-201ENST00000384049 122 ntBASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 RNU6-190P-201ENST00000384154 102 ntBASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 MIR514A2-201ENST00000385131 88 ntBASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 MIR514A3-201ENST00000385132 88 ntBASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 CISD1P1-201ENST00000393907 327 ntBASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 AL139039.1-201ENST00000401900 692 ntBASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 BTF3L4P3-201ENST00000418879 476 ntBASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 ERLEC1P1-201ENST00000433806 578 ntBASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 SNRPEP4-201ENST00000435815 279 ntBASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 HMGN2P26-201ENST00000463169 339 ntBASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 RPL31P60-201ENST00000478450 367 ntBASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 RN7SKP282-201ENST00000516824 299 ntBASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 RNU6-677P-201ENST00000516914 101 ntBASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 RNU6-685P-201ENST00000517088 95 ntBASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 AC012468.1-201ENST00000604888 430 ntBASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 AC106900.2-201ENST00000604994 317 ntBASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 AC008962.1-201ENST00000605729 304 ntBASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 AC022893.3-201ENST00000607665 437 ntBASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 AC025253.1-201ENST00000613623 543 ntBASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 uc_338.34-201ENST00000617467 174 ntBASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 uc_338.11-201ENST00000619132 160 ntBASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 AC104985.2-201ENST00000620598 500 ntBASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 AL136221.1-201ENST00000621449 509 ntBASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 AC005858.4-201ENST00000623191 700 ntBASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 MTND5P42-201ENST00000637720 498 ntBASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 MTND4P14-201ENST00000435799 1354 ntBASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SMARCAL1Q9NZC9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 RAP1BP3-201ENST00000407180 549 ntBASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 RNU6-387P-201ENST00000411331 105 ntBASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 AL513331.1-201ENST00000411908 397 ntBASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 ZNF863P-201ENST00000426746 417 ntBASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 AP000852.1-201ENST00000472460 573 ntBASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 CCDC34P1-201ENST00000507441 517 ntBASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 AL359273.1-201ENST00000510918 627 ntBASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 SNORA70.16-201ENST00000516390 95 ntBASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 RNU6-1256P-201ENST00000516539 103 ntBASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 BTF3P12-201ENST00000519620 469 ntBASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 MTND4P7-201ENST00000523876 130 ntBASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 MIR5004-201ENST00000579078 107 ntBASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 AC007179.3-201ENST00000604976 235 ntBASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 AC006111.3-201ENST00000622137 383 ntBASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 MIR622-201ENST00000638396 96 ntBASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 AC103710.2-202ENST00000641454 2853 ntBASIC3.06□□□□□ -1.92
SMARCAL1Q9NZC9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 ZNF807-201ENST00000328088 1707 ntBASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 Y_RNA.72-201ENST00000362894 103 ntBASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 Y_RNA.373-201ENST00000365600 103 ntBASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 Y_RNA.378-201ENST00000365652 113 ntBASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 RNU6-767P-201ENST00000384132 107 ntBASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 RNU4-46P-201ENST00000410818 138 ntBASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 RNA5SP344-201ENST00000411081 104 ntBASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 RPS12P24-201ENST00000412619 387 ntBASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 RPL27AP8-201ENST00000424277 446 ntBASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 HMGB1P27-201ENST00000431429 603 ntBASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 AL591212.2-201ENST00000433923 257 ntBASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms