Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 FGF7P8-201ENST00000402994 292 ntBASIC3.75□□□□□ -1.81
DDX56Q9NY93 AL122016.1-201ENST00000403365 367 ntBASIC3.75□□□□□ -1.81
DDX56Q9NY93 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.75□□□□□ -1.81
DDX56Q9NY93 USP9YP20-201ENST00000419224 558 ntBASIC3.75□□□□□ -1.81
DDX56Q9NY93 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
DDX56Q9NY93 TRIAP1P1-201ENST00000427062 225 ntBASIC3.75□□□□□ -1.81
DDX56Q9NY93 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.75□□□□□ -1.81
DDX56Q9NY93 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.75□□□□□ -1.81
DDX56Q9NY93 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
DDX56Q9NY93 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.75□□□□□ -1.81
DDX56Q9NY93 FCF1P3-201ENST00000496394 590 ntBASIC3.75□□□□□ -1.81
DDX56Q9NY93 MTCYBP18-201ENST00000501056 747 ntBASIC3.75□□□□□ -1.81
DDX56Q9NY93 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.75□□□□□ -1.81
DDX56Q9NY93 MRPS36P2-201ENST00000512569 299 ntBASIC3.75□□□□□ -1.81
DDX56Q9NY93 Y_RNA.665-201ENST00000516177 98 ntBASIC3.75□□□□□ -1.81
DDX56Q9NY93 RNU6-1069P-201ENST00000516612 133 ntBASIC3.75□□□□□ -1.81
DDX56Q9NY93 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.75□□□□□ -1.81
DDX56Q9NY93 AP006245.1-201ENST00000522549 120 ntBASIC3.75□□□□□ -1.81
DDX56Q9NY93 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.75□□□□□ -1.81
DDX56Q9NY93 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.75□□□□□ -1.81
DDX56Q9NY93 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.75□□□□□ -1.81
DDX56Q9NY93 MIR5685-201ENST00000579080 79 ntBASIC3.75□□□□□ -1.81
DDX56Q9NY93 OR1M4P-201ENST00000589199 287 ntBASIC3.75□□□□□ -1.81
DDX56Q9NY93 APOOP1-201ENST00000604695 592 ntBASIC3.75□□□□□ -1.81
DDX56Q9NY93 RNU6-6P-201ENST00000606623 107 ntBASIC3.75□□□□□ -1.81
DDX56Q9NY93 AL357078.3-201ENST00000607528 618 ntBASIC3.75□□□□□ -1.81
DDX56Q9NY93 uc_338.14-201ENST00000613162 166 ntBASIC3.75□□□□□ -1.81
DDX56Q9NY93 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
DDX56Q9NY93 AC100810.6-201ENST00000638068 285 ntBASIC3.75□□□□□ -1.81
DDX56Q9NY93 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.75□□□□□ -1.81
DDX56Q9NY93 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
DDX56Q9NY93 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.75□□□□□ -1.81
DDX56Q9NY93 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
DDX56Q9NY93 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
DDX56Q9NY93 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
DDX56Q9NY93 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.75□□□□□ -1.81
DDX56Q9NY93 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.75□□□□□ -1.81
DDX56Q9NY93 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
DDX56Q9NY93 AC068647.1-201ENST00000489539 2265 ntBASIC3.74□□□□□ -1.81
DDX56Q9NY93 U3.12-201ENST00000364498 214 ntBASIC3.74□□□□□ -1.81
DDX56Q9NY93 Y_RNA.303-201ENST00000364998 94 ntBASIC3.74□□□□□ -1.81
DDX56Q9NY93 MT-TL1-201ENST00000386347 75 ntBASIC3.74□□□□□ -1.81
DDX56Q9NY93 FTH1P15-201ENST00000406984 280 ntBASIC3.74□□□□□ -1.81
DDX56Q9NY93 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.74□□□□□ -1.81
DDX56Q9NY93 NDUFA5P4-201ENST00000436704 385 ntBASIC3.74□□□□□ -1.81
DDX56Q9NY93 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.74□□□□□ -1.81
DDX56Q9NY93 AC124916.1-201ENST00000444020 547 ntBASIC3.74□□□□□ -1.81
DDX56Q9NY93 AC083904.1-201ENST00000487828 231 ntBASIC3.74□□□□□ -1.81
DDX56Q9NY93 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.74□□□□□ -1.81
DDX56Q9NY93 AC026402.1-201ENST00000513642 170 ntBASIC3.74□□□□□ -1.81
DDX56Q9NY93 SNORA43.2-201ENST00000516652 128 ntBASIC3.74□□□□□ -1.81
DDX56Q9NY93 RNU6-323P-201ENST00000521915 107 ntBASIC3.74□□□□□ -1.81
DDX56Q9NY93 AC010186.2-204ENST00000537668 439 ntBASIC3.74□□□□□ -1.81
DDX56Q9NY93 CR383656.8-201ENST00000549046 145 ntBASIC3.74□□□□□ -1.81
DDX56Q9NY93 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.74□□□□□ -1.81
DDX56Q9NY93 MIR4425-201ENST00000580572 84 ntBASIC3.74□□□□□ -1.81
DDX56Q9NY93 MIR548S-201ENST00000581352 82 ntBASIC3.74□□□□□ -1.81
DDX56Q9NY93 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.74□□□□□ -1.81
DDX56Q9NY93 BNIP3P10-201ENST00000605360 577 ntBASIC3.74□□□□□ -1.81
DDX56Q9NY93 RNU6-85P-201ENST00000605989 107 ntBASIC3.74□□□□□ -1.81
DDX56Q9NY93 RNU6-91P-201ENST00000607774 107 ntBASIC3.74□□□□□ -1.81
DDX56Q9NY93 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.74□□□□□ -1.81
DDX56Q9NY93 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.74□□□□□ -1.81
DDX56Q9NY93 RMST_7.1-201ENST00000621935 268 ntBASIC3.74□□□□□ -1.81
DDX56Q9NY93 AP003355.3-201ENST00000623465 114 ntBASIC3.74□□□□□ -1.81
DDX56Q9NY93 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.74□□□□□ -1.81
DDX56Q9NY93 AC058791.1-201ENST00000608412 3198 ntBASIC3.74□□□□□ -1.81
DDX56Q9NY93 MTND5P1-201ENST00000445440 1375 ntBASIC3.74□□□□□ -1.81
DDX56Q9NY93 ZNF826P-207ENST00000622273 1910 ntBASIC3.74□□□□□ -1.81
DDX56Q9NY93 HAUS6P2-201ENST00000433254 2404 ntBASIC3.73□□□□□ -1.81
DDX56Q9NY93 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.73□□□□□ -1.81
DDX56Q9NY93 SNORD21-201ENST00000383953 95 ntBASIC3.73□□□□□ -1.81
DDX56Q9NY93 RNU6-1083P-201ENST00000384022 107 ntBASIC3.73□□□□□ -1.81
DDX56Q9NY93 AL512633.1-201ENST00000399931 655 ntBASIC3.73□□□□□ -1.81
DDX56Q9NY93 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.73□□□□□ -1.81
DDX56Q9NY93 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.73□□□□□ -1.81
DDX56Q9NY93 AC004975.1-201ENST00000428733 208 ntBASIC3.73□□□□□ -1.81
DDX56Q9NY93 AC091286.1-201ENST00000431233 461 ntBASIC3.73□□□□□ -1.81
DDX56Q9NY93 RPS29P7-201ENST00000439662 171 ntBASIC3.73□□□□□ -1.81
DDX56Q9NY93 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.73□□□□□ -1.81
DDX56Q9NY93 VN1R34P-201ENST00000447387 883 ntBASIC3.73□□□□□ -1.81
DDX56Q9NY93 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
DDX56Q9NY93 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.73□□□□□ -1.81
DDX56Q9NY93 AC018710.1-201ENST00000506509 158 ntBASIC3.73□□□□□ -1.81
DDX56Q9NY93 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.73□□□□□ -1.81
DDX56Q9NY93 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.73□□□□□ -1.81
DDX56Q9NY93 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.73□□□□□ -1.81
DDX56Q9NY93 RNU6-377P-201ENST00000515965 102 ntBASIC3.73□□□□□ -1.81
DDX56Q9NY93 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.73□□□□□ -1.81
DDX56Q9NY93 AC011471.1-201ENST00000585766 187 ntBASIC3.73□□□□□ -1.81
DDX56Q9NY93 BNIP3P25-201ENST00000596023 559 ntBASIC3.73□□□□□ -1.81
DDX56Q9NY93 AC099778.2-201ENST00000610904 211 ntBASIC3.73□□□□□ -1.81
DDX56Q9NY93 DUXAP9-208ENST00000622815 614 ntBASIC3.73□□□□□ -1.81
DDX56Q9NY93 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
DDX56Q9NY93 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.73□□□□□ -1.81
DDX56Q9NY93 MFSD8-233ENST00000641482 4860 ntBASIC3.72□□□□□ -1.81
DDX56Q9NY93 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.72□□□□□ -1.81
DDX56Q9NY93 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
DDX56Q9NY93 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.72□□□□□ -1.81
DDX56Q9NY93 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 191.2 ms