Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 SUMO2P15-201ENST00000604285 278 ntBASIC4.29□□□□□ -1.72
SSU72Q9NP77 AC073657.2-201ENST00000605661 303 ntBASIC4.29□□□□□ -1.72
SSU72Q9NP77 Y_RNA.772-201ENST00000606692 102 ntBASIC4.29□□□□□ -1.72
SSU72Q9NP77 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.29□□□□□ -1.72
SSU72Q9NP77 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SSU72Q9NP77 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.29□□□□□ -1.72
SSU72Q9NP77 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
SSU72Q9NP77 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.29□□□□□ -1.72
SSU72Q9NP77 AC007785.2-201ENST00000598627 1916 ntBASIC4.29□□□□□ -1.72
SSU72Q9NP77 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.29□□□□□ -1.72
SSU72Q9NP77 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSU72Q9NP77 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSU72Q9NP77 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
SSU72Q9NP77 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSU72Q9NP77 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.28□□□□□ -1.72
SSU72Q9NP77 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSU72Q9NP77 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
SSU72Q9NP77 SDAD1P1-202ENST00000524156 2051 ntBASIC4.28□□□□□ -1.72
SSU72Q9NP77 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.28□□□□□ -1.72
SSU72Q9NP77 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SSU72Q9NP77 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSU72Q9NP77 RNU6-78P-201ENST00000362897 107 ntBASIC4.28□□□□□ -1.72
SSU72Q9NP77 Y_RNA.83-201ENST00000363005 113 ntBASIC4.28□□□□□ -1.72
SSU72Q9NP77 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SSU72Q9NP77 RNU6-493P-201ENST00000391321 108 ntBASIC4.28□□□□□ -1.72
SSU72Q9NP77 MIR1179-201ENST00000408703 91 ntBASIC4.28□□□□□ -1.72
SSU72Q9NP77 AL358453.1-201ENST00000422522 250 ntBASIC4.28□□□□□ -1.72
SSU72Q9NP77 AC007560.1-201ENST00000426912 237 ntBASIC4.28□□□□□ -1.72
SSU72Q9NP77 RPL21P40-201ENST00000428586 483 ntBASIC4.28□□□□□ -1.72
SSU72Q9NP77 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.28□□□□□ -1.72
SSU72Q9NP77 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.28□□□□□ -1.72
SSU72Q9NP77 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.28□□□□□ -1.72
SSU72Q9NP77 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.28□□□□□ -1.72
SSU72Q9NP77 HSPE1P25-201ENST00000455484 251 ntBASIC4.28□□□□□ -1.72
SSU72Q9NP77 snoU13.24-201ENST00000458998 104 ntBASIC4.28□□□□□ -1.72
SSU72Q9NP77 RPL35AP15-201ENST00000468042 339 ntBASIC4.28□□□□□ -1.72
SSU72Q9NP77 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
SSU72Q9NP77 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.28□□□□□ -1.72
SSU72Q9NP77 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.28□□□□□ -1.72
SSU72Q9NP77 RNA5SP165-201ENST00000517142 115 ntBASIC4.28□□□□□ -1.72
SSU72Q9NP77 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.28□□□□□ -1.72
SSU72Q9NP77 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.28□□□□□ -1.72
SSU72Q9NP77 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.28□□□□□ -1.72
SSU72Q9NP77 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSU72Q9NP77 AC090617.3-201ENST00000573670 475 ntBASIC4.28□□□□□ -1.72
SSU72Q9NP77 MIR3921-201ENST00000577308 85 ntBASIC4.28□□□□□ -1.72
SSU72Q9NP77 MIR4659A-201ENST00000580269 81 ntBASIC4.28□□□□□ -1.72
SSU72Q9NP77 AC011445.2-201ENST00000599274 173 ntBASIC4.28□□□□□ -1.72
SSU72Q9NP77 AC234771.5-201ENST00000600161 514 ntBASIC4.28□□□□□ -1.72
SSU72Q9NP77 AL021997.2-201ENST00000615674 271 ntBASIC4.28□□□□□ -1.72
SSU72Q9NP77 U2.14-201ENST00000615943 113 ntBASIC4.28□□□□□ -1.72
SSU72Q9NP77 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.28□□□□□ -1.72
SSU72Q9NP77 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.28□□□□□ -1.72
SSU72Q9NP77 AC087385.3-201ENST00000620477 187 ntBASIC4.28□□□□□ -1.72
SSU72Q9NP77 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.28□□□□□ -1.72
SSU72Q9NP77 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSU72Q9NP77 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSU72Q9NP77 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSU72Q9NP77 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.28□□□□□ -1.72
SSU72Q9NP77 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
SSU72Q9NP77 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
SSU72Q9NP77 ZNF962P-201ENST00000443465 3140 ntBASIC4.27□□□□□ -1.73
SSU72Q9NP77 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.27□□□□□ -1.73
SSU72Q9NP77 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.27□□□□□ -1.73
SSU72Q9NP77 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSU72Q9NP77 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SSU72Q9NP77 RNU6-222P-201ENST00000362438 107 ntBASIC4.27□□□□□ -1.73
SSU72Q9NP77 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.27□□□□□ -1.73
SSU72Q9NP77 SNORA37-201ENST00000384504 129 ntBASIC4.27□□□□□ -1.73
SSU72Q9NP77 RNU6-125P-201ENST00000384505 107 ntBASIC4.27□□□□□ -1.73
SSU72Q9NP77 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSU72Q9NP77 RPL27AP8-201ENST00000424277 446 ntBASIC4.27□□□□□ -1.73
SSU72Q9NP77 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.27□□□□□ -1.73
SSU72Q9NP77 AL078601.1-201ENST00000444542 271 ntBASIC4.27□□□□□ -1.73
SSU72Q9NP77 ANP32BP2-201ENST00000454525 545 ntBASIC4.27□□□□□ -1.73
SSU72Q9NP77 RNU7-120P-201ENST00000459334 63 ntBASIC4.27□□□□□ -1.73
SSU72Q9NP77 KC877373.1-201ENST00000479066 408 ntBASIC4.27□□□□□ -1.73
SSU72Q9NP77 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.27□□□□□ -1.73
SSU72Q9NP77 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.27□□□□□ -1.73
SSU72Q9NP77 SERF1AP1-201ENST00000514575 187 ntBASIC4.27□□□□□ -1.73
SSU72Q9NP77 Y_RNA.683-201ENST00000516508 93 ntBASIC4.27□□□□□ -1.73
SSU72Q9NP77 SNORA31.18-201ENST00000517043 134 ntBASIC4.27□□□□□ -1.73
SSU72Q9NP77 AC022868.1-201ENST00000517767 391 ntBASIC4.27□□□□□ -1.73
SSU72Q9NP77 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.27□□□□□ -1.73
SSU72Q9NP77 IGKV3D-34-201ENST00000522638 302 ntBASIC4.27□□□□□ -1.73
SSU72Q9NP77 ATP5F1P5-201ENST00000526403 760 ntBASIC4.27□□□□□ -1.73
SSU72Q9NP77 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.27□□□□□ -1.73
SSU72Q9NP77 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.27□□□□□ -1.73
SSU72Q9NP77 AC010620.2-201ENST00000600135 313 ntBASIC4.27□□□□□ -1.73
SSU72Q9NP77 BRDTP1-201ENST00000605735 677 ntBASIC4.27□□□□□ -1.73
SSU72Q9NP77 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SSU72Q9NP77 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.27□□□□□ -1.73
SSU72Q9NP77 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.27□□□□□ -1.73
SSU72Q9NP77 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.27□□□□□ -1.73
SSU72Q9NP77 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.27□□□□□ -1.73
SSU72Q9NP77 AC025031.4-201ENST00000621248 3271 ntBASIC4.27□□□□□ -1.73
SSU72Q9NP77 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSU72Q9NP77 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSU72Q9NP77 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.26□□□□□ -1.73
SSU72Q9NP77 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms