Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.04□□□□□ -1.92
BRF2Q9HAW0 CYCSP39-201ENST00000565821 309 ntBASIC3.04□□□□□ -1.92
BRF2Q9HAW0 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.04□□□□□ -1.92
BRF2Q9HAW0 BNIP3P30-201ENST00000601184 574 ntBASIC3.04□□□□□ -1.92
BRF2Q9HAW0 AC006133.1-201ENST00000617106 264 ntBASIC3.04□□□□□ -1.92
BRF2Q9HAW0 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.04□□□□□ -1.92
BRF2Q9HAW0 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
BRF2Q9HAW0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
BRF2Q9HAW0 AC138915.1-201ENST00000565427 1685 ntBASIC3.04□□□□□ -1.92
BRF2Q9HAW0 AC093010.3-201ENST00000570269 15214 ntBASIC3.04□□□□□ -1.92
BRF2Q9HAW0 AC004944.1-201ENST00000517807 3059 ntBASIC3.04□□□□□ -1.92
BRF2Q9HAW0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
BRF2Q9HAW0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
BRF2Q9HAW0 RNU4-66P-201ENST00000365199 138 ntBASIC3.03□□□□□ -1.92
BRF2Q9HAW0 RNU6-166P-201ENST00000384371 107 ntBASIC3.03□□□□□ -1.92
BRF2Q9HAW0 RNU6-434P-201ENST00000384376 107 ntBASIC3.03□□□□□ -1.92
BRF2Q9HAW0 CIR1P3-201ENST00000405137 479 ntBASIC3.03□□□□□ -1.92
BRF2Q9HAW0 RPS4XP7-201ENST00000406274 780 ntBASIC3.03□□□□□ -1.92
BRF2Q9HAW0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.03□□□□□ -1.92
BRF2Q9HAW0 MTATP6P13-201ENST00000438531 667 ntBASIC3.03□□□□□ -1.92
BRF2Q9HAW0 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.03□□□□□ -1.92
BRF2Q9HAW0 AC109925.1-201ENST00000478069 331 ntBASIC3.03□□□□□ -1.92
BRF2Q9HAW0 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.03□□□□□ -1.92
BRF2Q9HAW0 AC092989.1-201ENST00000481235 277 ntBASIC3.03□□□□□ -1.92
BRF2Q9HAW0 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.03□□□□□ -1.92
BRF2Q9HAW0 SNORA67.7-201ENST00000516664 135 ntBASIC3.03□□□□□ -1.92
BRF2Q9HAW0 RNU6-835P-201ENST00000516974 104 ntBASIC3.03□□□□□ -1.92
BRF2Q9HAW0 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.03□□□□□ -1.92
BRF2Q9HAW0 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.03□□□□□ -1.92
BRF2Q9HAW0 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.03□□□□□ -1.92
BRF2Q9HAW0 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.03□□□□□ -1.92
BRF2Q9HAW0 AC087045.1-201ENST00000605856 382 ntBASIC3.03□□□□□ -1.92
BRF2Q9HAW0 Z82243.1-201ENST00000609432 473 ntBASIC3.03□□□□□ -1.92
BRF2Q9HAW0 AC092794.1-201ENST00000612734 582 ntBASIC3.03□□□□□ -1.92
BRF2Q9HAW0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.03□□□□□ -1.92
BRF2Q9HAW0 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.03□□□□□ -1.92
BRF2Q9HAW0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.03□□□□□ -1.92
BRF2Q9HAW0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
BRF2Q9HAW0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
BRF2Q9HAW0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
BRF2Q9HAW0 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.02□□□□□ -1.93
BRF2Q9HAW0 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
BRF2Q9HAW0 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
BRF2Q9HAW0 MIR148B-201ENST00000362252 99 ntBASIC3.02□□□□□ -1.93
BRF2Q9HAW0 RNY4P14-201ENST00000363656 96 ntBASIC3.02□□□□□ -1.93
BRF2Q9HAW0 RNU6-371P-201ENST00000364283 108 ntBASIC3.02□□□□□ -1.93
BRF2Q9HAW0 DYNLT3P1-201ENST00000378574 347 ntBASIC3.02□□□□□ -1.93
BRF2Q9HAW0 RNU6-877P-201ENST00000383868 107 ntBASIC3.02□□□□□ -1.93
BRF2Q9HAW0 SNORD21-201ENST00000383953 95 ntBASIC3.02□□□□□ -1.93
BRF2Q9HAW0 SNORA75B-201ENST00000384053 137 ntBASIC3.02□□□□□ -1.93
BRF2Q9HAW0 RNU6-1127P-201ENST00000384580 107 ntBASIC3.02□□□□□ -1.93
BRF2Q9HAW0 MIR183-201ENST00000384958 110 ntBASIC3.02□□□□□ -1.93
BRF2Q9HAW0 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.02□□□□□ -1.93
BRF2Q9HAW0 RNU4-47P-201ENST00000410876 114 ntBASIC3.02□□□□□ -1.93
BRF2Q9HAW0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.02□□□□□ -1.93
BRF2Q9HAW0 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.02□□□□□ -1.93
BRF2Q9HAW0 AL161651.1-201ENST00000440882 223 ntBASIC3.02□□□□□ -1.93
BRF2Q9HAW0 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.02□□□□□ -1.93
BRF2Q9HAW0 AL360271.2-201ENST00000447710 161 ntBASIC3.02□□□□□ -1.93
BRF2Q9HAW0 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.02□□□□□ -1.93
BRF2Q9HAW0 AC233279.1-201ENST00000455300 423 ntBASIC3.02□□□□□ -1.93
BRF2Q9HAW0 AL441985.1-201ENST00000457727 251 ntBASIC3.02□□□□□ -1.93
BRF2Q9HAW0 AL121769.1-201ENST00000469473 401 ntBASIC3.02□□□□□ -1.93
BRF2Q9HAW0 RPL31P41-201ENST00000477967 372 ntBASIC3.02□□□□□ -1.93
BRF2Q9HAW0 MTAPP1-201ENST00000489154 819 ntBASIC3.02□□□□□ -1.93
BRF2Q9HAW0 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.02□□□□□ -1.93
BRF2Q9HAW0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.02□□□□□ -1.93
BRF2Q9HAW0 AC074344.1-201ENST00000512823 224 ntBASIC3.02□□□□□ -1.93
BRF2Q9HAW0 AL121821.2-201ENST00000556081 394 ntBASIC3.02□□□□□ -1.93
BRF2Q9HAW0 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.02□□□□□ -1.93
BRF2Q9HAW0 AC010620.2-201ENST00000600135 313 ntBASIC3.02□□□□□ -1.93
BRF2Q9HAW0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.02□□□□□ -1.93
BRF2Q9HAW0 AC012119.1-201ENST00000603184 222 ntBASIC3.02□□□□□ -1.93
BRF2Q9HAW0 AC107304.1-201ENST00000604229 296 ntBASIC3.02□□□□□ -1.93
BRF2Q9HAW0 AC245389.1-201ENST00000605141 529 ntBASIC3.02□□□□□ -1.93
BRF2Q9HAW0 DISC2.1-201ENST00000612827 205 ntBASIC3.02□□□□□ -1.93
BRF2Q9HAW0 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.02□□□□□ -1.93
BRF2Q9HAW0 FER-210ENST00000628534 558 ntTSL 5 BASIC3.02□□□□□ -1.93
BRF2Q9HAW0 U6.105-201ENST00000637379 88 ntBASIC3.02□□□□□ -1.93
BRF2Q9HAW0 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.02□□□□□ -1.93
BRF2Q9HAW0 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.02□□□□□ -1.93
BRF2Q9HAW0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
BRF2Q9HAW0 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.02□□□□□ -1.93
BRF2Q9HAW0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
BRF2Q9HAW0 SNORA46-201ENST00000384762 135 ntBASIC3.01□□□□□ -1.93
BRF2Q9HAW0 MIR10A-201ENST00000385043 110 ntBASIC3.01□□□□□ -1.93
BRF2Q9HAW0 AL512633.1-201ENST00000399931 655 ntBASIC3.01□□□□□ -1.93
BRF2Q9HAW0 AL122016.1-201ENST00000403365 367 ntBASIC3.01□□□□□ -1.93
BRF2Q9HAW0 AL357075.1-201ENST00000404107 726 ntBASIC3.01□□□□□ -1.93
BRF2Q9HAW0 RNU6-1068P-201ENST00000410958 103 ntBASIC3.01□□□□□ -1.93
BRF2Q9HAW0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.01□□□□□ -1.93
BRF2Q9HAW0 AL121601.2-201ENST00000438019 707 ntBASIC3.01□□□□□ -1.93
BRF2Q9HAW0 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.01□□□□□ -1.93
BRF2Q9HAW0 PRPS1P1-201ENST00000445305 876 ntBASIC3.01□□□□□ -1.93
BRF2Q9HAW0 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.01□□□□□ -1.93
BRF2Q9HAW0 AC006026.2-201ENST00000457376 180 ntBASIC3.01□□□□□ -1.93
BRF2Q9HAW0 RNU7-180P-201ENST00000459240 63 ntBASIC3.01□□□□□ -1.93
BRF2Q9HAW0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.01□□□□□ -1.93
BRF2Q9HAW0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.01□□□□□ -1.93
BRF2Q9HAW0 MTND3P25-201ENST00000509243 135 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms