Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SENP3Q9H4L4 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SENP3Q9H4L4 AC026241.1-201ENST00000517873 2142 ntBASIC8.78□□□□□ -1
SENP3Q9H4L4 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC8.78□□□□□ -1
SENP3Q9H4L4 YES1-203ENST00000577961 4554 ntTSL 5 BASIC8.78□□□□□ -1
SENP3Q9H4L4 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
SENP3Q9H4L4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SENP3Q9H4L4 RNU6-1190P-201ENST00000410811 104 ntBASIC8.78□□□□□ -1
SENP3Q9H4L4 AC069257.2-201ENST00000441819 155 ntBASIC8.78□□□□□ -1
SENP3Q9H4L4 RANP2-201ENST00000456833 229 ntBASIC8.78□□□□□ -1
SENP3Q9H4L4 AC021074.2-201ENST00000468434 172 ntBASIC8.78□□□□□ -1
SENP3Q9H4L4 RPL36AP48-201ENST00000485521 314 ntBASIC8.78□□□□□ -1
SENP3Q9H4L4 RNU6-1282P-201ENST00000516735 96 ntBASIC8.78□□□□□ -1
SENP3Q9H4L4 IGLV3-6-201ENST00000523937 250 ntBASIC8.78□□□□□ -1
SENP3Q9H4L4 AP004371.1-201ENST00000525240 214 ntBASIC8.78□□□□□ -1
SENP3Q9H4L4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC8.78□□□□□ -1
SENP3Q9H4L4 AL691477.1-201ENST00000624398 162 ntBASIC8.78□□□□□ -1
SENP3Q9H4L4 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SENP3Q9H4L4 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC8.78□□□□□ -1
SENP3Q9H4L4 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
SENP3Q9H4L4 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC8.78□□□□□ -1
SENP3Q9H4L4 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC8.78□□□□□ -1
SENP3Q9H4L4 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC8.78□□□□□ -1
SENP3Q9H4L4 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
SENP3Q9H4L4 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
SENP3Q9H4L4 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
SENP3Q9H4L4 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC8.78□□□□□ -1
SENP3Q9H4L4 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC8.77□□□□□ -1
SENP3Q9H4L4 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
SENP3Q9H4L4 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1
SENP3Q9H4L4 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SENP3Q9H4L4 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SENP3Q9H4L4 MIR23A-201ENST00000385245 73 ntBASIC8.77□□□□□ -1.01
SENP3Q9H4L4 MIR1236-201ENST00000408340 102 ntBASIC8.77□□□□□ -1.01
SENP3Q9H4L4 SPINT5P-201ENST00000448174 155 ntBASIC8.77□□□□□ -1.01
SENP3Q9H4L4 RN7SL547P-201ENST00000490793 290 ntBASIC8.77□□□□□ -1.01
SENP3Q9H4L4 AC023141.12-201ENST00000512399 199 ntBASIC8.77□□□□□ -1.01
SENP3Q9H4L4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC8.77□□□□□ -1.01
SENP3Q9H4L4 AC069200.1-201ENST00000609511 323 ntBASIC8.77□□□□□ -1.01
SENP3Q9H4L4 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC8.77□□□□□ -1.01
SENP3Q9H4L4 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC8.77□□□□□ -1.01
SENP3Q9H4L4 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
SENP3Q9H4L4 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SENP3Q9H4L4 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SENP3Q9H4L4 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SENP3Q9H4L4 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC8.76□□□□□ -1.01
SENP3Q9H4L4 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
SENP3Q9H4L4 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
SENP3Q9H4L4 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC8.76□□□□□ -1.01
SENP3Q9H4L4 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
SENP3Q9H4L4 snoU2_19.1-201ENST00000362361 80 ntBASIC8.76□□□□□ -1.01
SENP3Q9H4L4 RN7SKP103-201ENST00000363848 320 ntBASIC8.76□□□□□ -1.01
SENP3Q9H4L4 SCARNA18.1-201ENST00000516330 83 ntBASIC8.76□□□□□ -1.01
SENP3Q9H4L4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC8.76□□□□□ -1.01
SENP3Q9H4L4 RPSAP73-201ENST00000614820 330 ntBASIC8.76□□□□□ -1.01
SENP3Q9H4L4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SENP3Q9H4L4 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SENP3Q9H4L4 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SENP3Q9H4L4 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
SENP3Q9H4L4 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SENP3Q9H4L4 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC8.76□□□□□ -1.01
SENP3Q9H4L4 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SENP3Q9H4L4 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SENP3Q9H4L4 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC8.75□□□□□ -1.01
SENP3Q9H4L4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
SENP3Q9H4L4 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SENP3Q9H4L4 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC8.75□□□□□ -1.01
SENP3Q9H4L4 RNU6-1010P-201ENST00000362757 107 ntBASIC8.75□□□□□ -1.01
SENP3Q9H4L4 SNORA43.1-201ENST00000364863 140 ntBASIC8.75□□□□□ -1.01
SENP3Q9H4L4 KRTAP19-11P-201ENST00000439851 104 ntBASIC8.75□□□□□ -1.01
SENP3Q9H4L4 AC092967.1-201ENST00000449016 481 ntBASIC8.75□□□□□ -1.01
SENP3Q9H4L4 AC009220.1-201ENST00000451614 275 ntBASIC8.75□□□□□ -1.01
SENP3Q9H4L4 IGKV1D-22-201ENST00000518953 324 ntBASIC8.75□□□□□ -1.01
SENP3Q9H4L4 MIR4505-201ENST00000582238 73 ntBASIC8.75□□□□□ -1.01
SENP3Q9H4L4 AC027229.1-201ENST00000583887 253 ntBASIC8.75□□□□□ -1.01
SENP3Q9H4L4 AL132640.3-201ENST00000630473 177 ntBASIC8.75□□□□□ -1.01
SENP3Q9H4L4 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
SENP3Q9H4L4 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
SENP3Q9H4L4 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC8.75□□□□□ -1.01
SENP3Q9H4L4 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC8.75□□□□□ -1.01
SENP3Q9H4L4 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
SENP3Q9H4L4 FAM35DP-201ENST00000323387 2712 ntBASIC8.74□□□□□ -1.01
SENP3Q9H4L4 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SENP3Q9H4L4 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
SENP3Q9H4L4 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SENP3Q9H4L4 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SENP3Q9H4L4 RNA5SP333-201ENST00000363466 118 ntBASIC8.74□□□□□ -1.01
SENP3Q9H4L4 RNA5SP334-201ENST00000364825 118 ntBASIC8.74□□□□□ -1.01
SENP3Q9H4L4 RN7SKP186-201ENST00000365371 303 ntBASIC8.74□□□□□ -1.01
SENP3Q9H4L4 MIR195-201ENST00000385194 87 ntBASIC8.74□□□□□ -1.01
SENP3Q9H4L4 RNU6-587P-201ENST00000391282 106 ntBASIC8.74□□□□□ -1.01
SENP3Q9H4L4 AL645927.1-201ENST00000396783 406 ntBASIC8.74□□□□□ -1.01
SENP3Q9H4L4 AC007568.1-201ENST00000422912 471 ntBASIC8.74□□□□□ -1.01
SENP3Q9H4L4 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
SENP3Q9H4L4 RN7SL727P-201ENST00000482164 296 ntBASIC8.74□□□□□ -1.01
SENP3Q9H4L4 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC8.74□□□□□ -1.01
SENP3Q9H4L4 AP003484.1-201ENST00000530974 250 ntBASIC8.74□□□□□ -1.01
SENP3Q9H4L4 MIR4484-201ENST00000582855 83 ntBASIC8.74□□□□□ -1.01
SENP3Q9H4L4 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SENP3Q9H4L4 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 244.4 ms