Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 SNORA31.19-201ENST00000517079 126 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 AC092451.2-201ENST00000538746 658 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.31□□□□□ -2.2
NKX6-2Q9C056 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.31□□□□□ -2.2
NKX6-2Q9C056 AC009712.1-201ENST00000564938 316 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 AC026271.5-201ENST00000577873 130 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 AL670379.10-201ENST00000604330 253 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 ELOCP5-201ENST00000604924 333 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 AL670379.9-201ENST00000605428 253 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.31□□□□□ -2.2
NKX6-2Q9C056 U2.15-201ENST00000611544 191 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 U2.16-201ENST00000613119 191 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 U2.12-201ENST00000613778 191 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 U2.20-201ENST00000613956 192 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 U2.9-201ENST00000615427 191 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 U2.11-201ENST00000616345 191 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 U2.2-201ENST00000616535 191 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 U2.3-201ENST00000617785 191 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 U2.19-201ENST00000618602 191 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 RNU2-1-201ENST00000618664 191 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 U2.6-201ENST00000619225 191 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 U2.5-201ENST00000619465 191 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 U2.10-201ENST00000620268 191 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.31□□□□□ -2.2
NKX6-2Q9C056 AL512643.1-201ENST00000635735 524 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.31□□□□□ -2.2
NKX6-2Q9C056 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.3□□□□□ -2.2
NKX6-2Q9C056 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.3□□□□□ -2.2
NKX6-2Q9C056 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.3□□□□□ -2.2
NKX6-2Q9C056 RNU6-1284P-201ENST00000363701 100 ntBASIC1.3□□□□□ -2.2
NKX6-2Q9C056 RNU6-14P-201ENST00000384630 106 ntBASIC1.3□□□□□ -2.2
NKX6-2Q9C056 AL136310.1-201ENST00000404926 654 ntBASIC1.3□□□□□ -2.2
NKX6-2Q9C056 RNA5SP425-201ENST00000410336 112 ntBASIC1.3□□□□□ -2.2
NKX6-2Q9C056 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
NKX6-2Q9C056 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.3□□□□□ -2.2
NKX6-2Q9C056 AC083875.1-201ENST00000419509 405 ntBASIC1.3□□□□□ -2.2
NKX6-2Q9C056 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.3□□□□□ -2.2
NKX6-2Q9C056 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.3□□□□□ -2.2
NKX6-2Q9C056 DPH3P2-201ENST00000422618 250 ntBASIC1.3□□□□□ -2.2
NKX6-2Q9C056 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.3□□□□□ -2.2
NKX6-2Q9C056 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.3□□□□□ -2.2
NKX6-2Q9C056 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.3□□□□□ -2.2
NKX6-2Q9C056 AP000949.1-201ENST00000438328 629 ntBASIC1.3□□□□□ -2.2
NKX6-2Q9C056 AL137159.1-201ENST00000452808 512 ntBASIC1.3□□□□□ -2.2
NKX6-2Q9C056 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
NKX6-2Q9C056 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.3□□□□□ -2.2
NKX6-2Q9C056 RNU6-667P-201ENST00000517186 102 ntBASIC1.3□□□□□ -2.2
NKX6-2Q9C056 DEFB108A-201ENST00000530110 222 ntBASIC1.3□□□□□ -2.2
NKX6-2Q9C056 AP000907.2-201ENST00000530827 353 ntBASIC1.3□□□□□ -2.2
NKX6-2Q9C056 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.3□□□□□ -2.2
NKX6-2Q9C056 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.3□□□□□ -2.2
NKX6-2Q9C056 AL160236.1-201ENST00000556317 195 ntBASIC1.3□□□□□ -2.2
NKX6-2Q9C056 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.3□□□□□ -2.2
NKX6-2Q9C056 AC093249.1-201ENST00000567049 203 ntBASIC1.3□□□□□ -2.2
NKX6-2Q9C056 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.3□□□□□ -2.2
NKX6-2Q9C056 AL358072.1-201ENST00000604156 575 ntBASIC1.3□□□□□ -2.2
NKX6-2Q9C056 PART1_2.1-201ENST00000612397 250 ntBASIC1.3□□□□□ -2.2
NKX6-2Q9C056 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.3□□□□□ -2.2
NKX6-2Q9C056 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.3□□□□□ -2.2
NKX6-2Q9C056 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.3□□□□□ -2.2
NKX6-2Q9C056 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
NKX6-2Q9C056 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
NKX6-2Q9C056 RNU5A-8P-201ENST00000364102 114 ntBASIC1.29□□□□□ -2.2
NKX6-2Q9C056 SNORA67.3-201ENST00000384366 140 ntBASIC1.29□□□□□ -2.2
NKX6-2Q9C056 SNORA8-201ENST00000384574 139 ntBASIC1.29□□□□□ -2.2
NKX6-2Q9C056 MIR518D-201ENST00000385014 87 ntBASIC1.29□□□□□ -2.2
NKX6-2Q9C056 MIR934-201ENST00000401241 83 ntBASIC1.29□□□□□ -2.2
NKX6-2Q9C056 FTH1P15-201ENST00000406984 280 ntBASIC1.29□□□□□ -2.2
NKX6-2Q9C056 FCF1P10-201ENST00000407590 479 ntBASIC1.29□□□□□ -2.2
NKX6-2Q9C056 MIR1294-201ENST00000408503 142 ntBASIC1.29□□□□□ -2.2
NKX6-2Q9C056 RNU6-1140P-201ENST00000410517 106 ntBASIC1.29□□□□□ -2.2
NKX6-2Q9C056 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.29□□□□□ -2.2
NKX6-2Q9C056 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.29□□□□□ -2.2
NKX6-2Q9C056 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.29□□□□□ -2.2
NKX6-2Q9C056 AL445669.1-201ENST00000426743 755 ntBASIC1.29□□□□□ -2.2
NKX6-2Q9C056 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.29□□□□□ -2.2
NKX6-2Q9C056 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.29□□□□□ -2.2
NKX6-2Q9C056 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.29□□□□□ -2.2
NKX6-2Q9C056 AL831737.1-201ENST00000441288 271 ntBASIC1.29□□□□□ -2.2
NKX6-2Q9C056 AC007327.1-201ENST00000447461 264 ntBASIC1.29□□□□□ -2.2
NKX6-2Q9C056 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.29□□□□□ -2.2
NKX6-2Q9C056 KATNBL1P6-201ENST00000453433 915 ntBASIC1.29□□□□□ -2.2
NKX6-2Q9C056 AL672167.3-201ENST00000465951 960 ntBASIC1.29□□□□□ -2.2
NKX6-2Q9C056 AC006512.1-201ENST00000468816 291 ntBASIC1.29□□□□□ -2.2
NKX6-2Q9C056 AC023790.1-201ENST00000482174 347 ntBASIC1.29□□□□□ -2.2
NKX6-2Q9C056 AC016550.1-201ENST00000505348 785 ntBASIC1.29□□□□□ -2.2
NKX6-2Q9C056 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
NKX6-2Q9C056 MTND4P2-201ENST00000507767 1203 ntBASIC1.29□□□□□ -2.2
NKX6-2Q9C056 SLC25A15P5-201ENST00000508033 253 ntBASIC1.29□□□□□ -2.2
NKX6-2Q9C056 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.29□□□□□ -2.2
NKX6-2Q9C056 AC008834.1-201ENST00000511612 175 ntBASIC1.29□□□□□ -2.2
NKX6-2Q9C056 MTCYBP43-201ENST00000513621 740 ntBASIC1.29□□□□□ -2.2
NKX6-2Q9C056 RNU6-143P-201ENST00000516942 93 ntBASIC1.29□□□□□ -2.2
NKX6-2Q9C056 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.29□□□□□ -2.2
NKX6-2Q9C056 CYCSP27-201ENST00000527643 293 ntBASIC1.29□□□□□ -2.2
NKX6-2Q9C056 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.29□□□□□ -2.2
NKX6-2Q9C056 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.29□□□□□ -2.2
NKX6-2Q9C056 RPL30P11-203ENST00000598995 310 ntBASIC1.29□□□□□ -2.2
NKX6-2Q9C056 AL606834.3-201ENST00000602615 496 ntBASIC1.29□□□□□ -2.2
NKX6-2Q9C056 AL596327.1-201ENST00000603629 213 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms