Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 RNU6-103P-201ENST00000363686 107 ntBASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 RNU6-968P-201ENST00000384076 107 ntBASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 RNU6-1145P-201ENST00000384246 107 ntBASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 RPS26P8-201ENST00000393490 348 ntBASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 Y_RNA.651-201ENST00000459380 103 ntBASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 Y_RNA.637-201ENST00000459424 114 ntBASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 ENPP7P9-201ENST00000514456 627 ntBASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 AC107016.1-201ENST00000550463 337 ntBASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 HMGB1P14-201ENST00000557424 591 ntBASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 MIR3145-201ENST00000580727 82 ntBASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 AC012468.1-201ENST00000604888 430 ntBASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 U6.95-201ENST00000636931 70 ntBASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 ASNSP1-201ENST00000518311 1939 ntBASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.82□□□□□ -1.64
CNTNAP3Q9BZ76 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 SNORD113.2-201ENST00000364166 89 ntBASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 SNORA25.7-201ENST00000364375 127 ntBASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 RNU1-136P-201ENST00000384181 164 ntBASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 RNU6-281P-201ENST00000384212 103 ntBASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 MIR329-1-201ENST00000385028 80 ntBASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 RNU6-1025P-201ENST00000410629 104 ntBASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 AL158156.1-201ENST00000422509 473 ntBASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 NDUFB4P7-201ENST00000423198 363 ntBASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 RN7SL443P-201ENST00000464331 290 ntBASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 AC092754.1-201ENST00000472975 479 ntBASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 AL121594.1-201ENST00000475906 575 ntBASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 RPL36AP41-201ENST00000493820 306 ntBASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 RNA5SP471-201ENST00000516971 106 ntBASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 RNA5SP165-201ENST00000517142 115 ntBASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 RNU4-60P-201ENST00000517239 135 ntBASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 MRPL49P2-201ENST00000521066 465 ntBASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 AC006272.2-201ENST00000594725 163 ntBASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 AC105254.2-201ENST00000603636 436 ntBASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 AC099669.2-201ENST00000616549 437 ntBASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 AC092376.2-201ENST00000622621 4116 ntBASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 AC008555.8-201ENST00000623602 2168 ntBASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
CNTNAP3Q9BZ76 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 ABCC13-202ENST00000463099 3842 ntBASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 RNU6-245P-201ENST00000384020 107 ntBASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 MIR32-201ENST00000384965 70 ntBASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 SNORD37.2-201ENST00000391075 66 ntBASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 UBA52P6-201ENST00000399822 382 ntBASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 YME1L1P1-201ENST00000429435 297 ntBASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 AC104164.2-201ENST00000496953 495 ntBASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms