Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.25□□□□□ -2.05
EBF4Q9BQW3 MIR3167-201ENST00000579623 85 ntBASIC2.25□□□□□ -2.05
EBF4Q9BQW3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
EBF4Q9BQW3 AC007684.1-201ENST00000609671 477 ntBASIC2.25□□□□□ -2.05
EBF4Q9BQW3 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.25□□□□□ -2.05
EBF4Q9BQW3 AL161629.2-201ENST00000615347 275 ntBASIC2.25□□□□□ -2.05
EBF4Q9BQW3 AL589994.2-201ENST00000621124 579 ntBASIC2.25□□□□□ -2.05
EBF4Q9BQW3 AC138649.3-201ENST00000622154 254 ntBASIC2.25□□□□□ -2.05
EBF4Q9BQW3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.25□□□□□ -2.05
EBF4Q9BQW3 AL157786.1-207ENST00000627771 695 ntBASIC2.25□□□□□ -2.05
EBF4Q9BQW3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
EBF4Q9BQW3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
EBF4Q9BQW3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.25□□□□□ -2.05
EBF4Q9BQW3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
EBF4Q9BQW3 AC022336.2-201ENST00000568966 2538 ntBASIC2.25□□□□□ -2.05
EBF4Q9BQW3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
EBF4Q9BQW3 AL139276.1-201ENST00000311910 1001 ntBASIC2.24□□□□□ -2.05
EBF4Q9BQW3 Y_RNA.381-201ENST00000365666 102 ntBASIC2.24□□□□□ -2.05
EBF4Q9BQW3 RNU6-39P-201ENST00000384344 107 ntBASIC2.24□□□□□ -2.05
EBF4Q9BQW3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
EBF4Q9BQW3 CALM2P3-201ENST00000400429 449 ntBASIC2.24□□□□□ -2.05
EBF4Q9BQW3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.24□□□□□ -2.05
EBF4Q9BQW3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.24□□□□□ -2.05
EBF4Q9BQW3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.24□□□□□ -2.05
EBF4Q9BQW3 RAC1P6-201ENST00000423911 575 ntBASIC2.24□□□□□ -2.05
EBF4Q9BQW3 GTF2IP20-201ENST00000431663 360 ntBASIC2.24□□□□□ -2.05
EBF4Q9BQW3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.24□□□□□ -2.05
EBF4Q9BQW3 SNRPEP9-201ENST00000436794 238 ntBASIC2.24□□□□□ -2.05
EBF4Q9BQW3 HMGB3P12-201ENST00000438745 556 ntBASIC2.24□□□□□ -2.05
EBF4Q9BQW3 AL031659.1-201ENST00000447075 539 ntBASIC2.24□□□□□ -2.05
EBF4Q9BQW3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.24□□□□□ -2.05
EBF4Q9BQW3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.24□□□□□ -2.05
EBF4Q9BQW3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.24□□□□□ -2.05
EBF4Q9BQW3 snoU109.1-201ENST00000459339 135 ntBASIC2.24□□□□□ -2.05
EBF4Q9BQW3 RNU7-23P-201ENST00000459465 62 ntBASIC2.24□□□□□ -2.05
EBF4Q9BQW3 AC004924.1-201ENST00000480160 781 ntBASIC2.24□□□□□ -2.05
EBF4Q9BQW3 AC105252.1-201ENST00000503089 286 ntBASIC2.24□□□□□ -2.05
EBF4Q9BQW3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.24□□□□□ -2.05
EBF4Q9BQW3 AC011352.1-201ENST00000512300 793 ntBASIC2.24□□□□□ -2.05
EBF4Q9BQW3 Y_RNA.672-201ENST00000516289 104 ntBASIC2.24□□□□□ -2.05
EBF4Q9BQW3 RNA5SP165-201ENST00000517142 115 ntBASIC2.24□□□□□ -2.05
EBF4Q9BQW3 MTND4LP26-201ENST00000518144 282 ntBASIC2.24□□□□□ -2.05
EBF4Q9BQW3 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.24□□□□□ -2.05
EBF4Q9BQW3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.24□□□□□ -2.05
EBF4Q9BQW3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.24□□□□□ -2.05
EBF4Q9BQW3 RPS3AP4-201ENST00000555161 764 ntBASIC2.24□□□□□ -2.05
EBF4Q9BQW3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.24□□□□□ -2.05
EBF4Q9BQW3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.24□□□□□ -2.05
EBF4Q9BQW3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.24□□□□□ -2.05
EBF4Q9BQW3 TPRKBP2-201ENST00000565969 475 ntBASIC2.24□□□□□ -2.05
EBF4Q9BQW3 AC103810.1-201ENST00000579873 453 ntBASIC2.24□□□□□ -2.05
EBF4Q9BQW3 AC012468.1-201ENST00000604888 430 ntBASIC2.24□□□□□ -2.05
EBF4Q9BQW3 AL136363.1-201ENST00000605349 337 ntBASIC2.24□□□□□ -2.05
EBF4Q9BQW3 AC126118.1-201ENST00000607744 628 ntBASIC2.24□□□□□ -2.05
EBF4Q9BQW3 MIR6895-201ENST00000613497 78 ntBASIC2.24□□□□□ -2.05
EBF4Q9BQW3 AL442067.2-201ENST00000614033 363 ntBASIC2.24□□□□□ -2.05
EBF4Q9BQW3 AC092608.2-201ENST00000624427 218 ntBASIC2.24□□□□□ -2.05
EBF4Q9BQW3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.24□□□□□ -2.05
EBF4Q9BQW3 AC080100.1-201ENST00000624239 5356 ntBASIC2.23□□□□□ -2.05
EBF4Q9BQW3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
EBF4Q9BQW3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
EBF4Q9BQW3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
EBF4Q9BQW3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.23□□□□□ -2.05
EBF4Q9BQW3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
EBF4Q9BQW3 RNU6-288P-201ENST00000363690 104 ntBASIC2.23□□□□□ -2.05
EBF4Q9BQW3 Y_RNA.372-201ENST00000365599 102 ntBASIC2.23□□□□□ -2.05
EBF4Q9BQW3 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
EBF4Q9BQW3 RNA5SP171-201ENST00000391071 115 ntBASIC2.23□□□□□ -2.05
EBF4Q9BQW3 AC068050.1-201ENST00000394891 380 ntBASIC2.23□□□□□ -2.05
EBF4Q9BQW3 AC023141.4-201ENST00000412031 328 ntBASIC2.23□□□□□ -2.05
EBF4Q9BQW3 MTND1P23-201ENST00000416931 372 ntBASIC2.23□□□□□ -2.05
EBF4Q9BQW3 ISCA1P1-201ENST00000426679 387 ntBASIC2.23□□□□□ -2.05
EBF4Q9BQW3 AL451062.2-201ENST00000427515 271 ntBASIC2.23□□□□□ -2.05
EBF4Q9BQW3 AC092427.1-202ENST00000430569 476 ntBASIC2.23□□□□□ -2.05
EBF4Q9BQW3 AC018634.1-201ENST00000437554 401 ntBASIC2.23□□□□□ -2.05
EBF4Q9BQW3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.23□□□□□ -2.05
EBF4Q9BQW3 MRPS17P3-201ENST00000465453 385 ntBASIC2.23□□□□□ -2.05
EBF4Q9BQW3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.23□□□□□ -2.05
EBF4Q9BQW3 RPS27P26-201ENST00000494583 239 ntBASIC2.23□□□□□ -2.05
EBF4Q9BQW3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.23□□□□□ -2.05
EBF4Q9BQW3 RNU6-718P-201ENST00000516166 105 ntBASIC2.23□□□□□ -2.05
EBF4Q9BQW3 RNU6-1092P-201ENST00000516955 87 ntBASIC2.23□□□□□ -2.05
EBF4Q9BQW3 MTCO2P4-201ENST00000517968 247 ntBASIC2.23□□□□□ -2.05
EBF4Q9BQW3 FAM92A1P1-201ENST00000528023 890 ntBASIC2.23□□□□□ -2.05
EBF4Q9BQW3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.23□□□□□ -2.05
EBF4Q9BQW3 AK6P1-201ENST00000540219 478 ntBASIC2.23□□□□□ -2.05
EBF4Q9BQW3 AC087883.1-201ENST00000551882 391 ntBASIC2.23□□□□□ -2.05
EBF4Q9BQW3 AL359212.1-201ENST00000556608 614 ntBASIC2.23□□□□□ -2.05
EBF4Q9BQW3 AC025281.1-201ENST00000567026 265 ntBASIC2.23□□□□□ -2.05
EBF4Q9BQW3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.23□□□□□ -2.05
EBF4Q9BQW3 AC008739.2-201ENST00000597006 317 ntBASIC2.23□□□□□ -2.05
EBF4Q9BQW3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.23□□□□□ -2.05
EBF4Q9BQW3 AC103810.6-201ENST00000606708 136 ntBASIC2.23□□□□□ -2.05
EBF4Q9BQW3 AC096577.2-201ENST00000611455 153 ntBASIC2.23□□□□□ -2.05
EBF4Q9BQW3 MIR6766-201ENST00000622641 72 ntBASIC2.23□□□□□ -2.05
EBF4Q9BQW3 PISRT1-201ENST00000626175 531 ntBASIC2.23□□□□□ -2.05
EBF4Q9BQW3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.23□□□□□ -2.05
EBF4Q9BQW3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.23□□□□□ -2.05
EBF4Q9BQW3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.23□□□□□ -2.05
EBF4Q9BQW3 U2.21-201ENST00000637295 81 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms