Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.93□□□□□ -1.62
USB1Q9BQ65 AC023043.3-201ENST00000593113 385 ntBASIC4.93□□□□□ -1.62
USB1Q9BQ65 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.93□□□□□ -1.62
USB1Q9BQ65 SNRPGP20-201ENST00000604477 205 ntBASIC4.93□□□□□ -1.62
USB1Q9BQ65 AC012468.1-201ENST00000604888 430 ntBASIC4.93□□□□□ -1.62
USB1Q9BQ65 AL591034.3-201ENST00000605511 685 ntBASIC4.93□□□□□ -1.62
USB1Q9BQ65 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
USB1Q9BQ65 MIR3529-201ENST00000637713 78 ntBASIC4.93□□□□□ -1.62
USB1Q9BQ65 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
USB1Q9BQ65 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.93□□□□□ -1.62
USB1Q9BQ65 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
USB1Q9BQ65 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.92□□□□□ -1.62
USB1Q9BQ65 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.92□□□□□ -1.62
USB1Q9BQ65 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.92□□□□□ -1.62
USB1Q9BQ65 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.92□□□□□ -1.62
USB1Q9BQ65 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
USB1Q9BQ65 Y_RNA.415-201ENST00000384012 112 ntBASIC4.92□□□□□ -1.62
USB1Q9BQ65 RNU1-136P-201ENST00000384181 164 ntBASIC4.92□□□□□ -1.62
USB1Q9BQ65 RNU6-768P-201ENST00000384683 107 ntBASIC4.92□□□□□ -1.62
USB1Q9BQ65 MIR526A2-201ENST00000390198 65 ntBASIC4.92□□□□□ -1.62
USB1Q9BQ65 RNU6-1197P-201ENST00000391183 107 ntBASIC4.92□□□□□ -1.62
USB1Q9BQ65 AL009179.1-201ENST00000406085 265 ntBASIC4.92□□□□□ -1.62
USB1Q9BQ65 YPEL5P1-201ENST00000419731 367 ntBASIC4.92□□□□□ -1.62
USB1Q9BQ65 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.92□□□□□ -1.62
USB1Q9BQ65 RPS11P7-201ENST00000442125 465 ntBASIC4.92□□□□□ -1.62
USB1Q9BQ65 HMGB3P8-201ENST00000449709 577 ntBASIC4.92□□□□□ -1.62
USB1Q9BQ65 AC090525.1-201ENST00000479116 478 ntBASIC4.92□□□□□ -1.62
USB1Q9BQ65 NIP7P2-201ENST00000485801 544 ntBASIC4.92□□□□□ -1.62
USB1Q9BQ65 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.92□□□□□ -1.62
USB1Q9BQ65 RNU6-589P-201ENST00000516485 107 ntBASIC4.92□□□□□ -1.62
USB1Q9BQ65 IGLV2-28-201ENST00000520681 304 ntBASIC4.92□□□□□ -1.62
USB1Q9BQ65 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.92□□□□□ -1.62
USB1Q9BQ65 MRPS21P7-201ENST00000566937 238 ntBASIC4.92□□□□□ -1.62
USB1Q9BQ65 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.92□□□□□ -1.62
USB1Q9BQ65 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.92□□□□□ -1.62
USB1Q9BQ65 AC025946.2-201ENST00000603398 234 ntBASIC4.92□□□□□ -1.62
USB1Q9BQ65 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
USB1Q9BQ65 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.92□□□□□ -1.62
USB1Q9BQ65 MIR8080-201ENST00000622224 89 ntBASIC4.92□□□□□ -1.62
USB1Q9BQ65 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
USB1Q9BQ65 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
USB1Q9BQ65 MTND5P32-201ENST00000560711 1802 ntBASIC4.92□□□□□ -1.62
USB1Q9BQ65 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.92□□□□□ -1.62
USB1Q9BQ65 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
USB1Q9BQ65 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
USB1Q9BQ65 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
USB1Q9BQ65 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
USB1Q9BQ65 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
USB1Q9BQ65 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
USB1Q9BQ65 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
USB1Q9BQ65 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.92□□□□□ -1.62
USB1Q9BQ65 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
USB1Q9BQ65 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
USB1Q9BQ65 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
USB1Q9BQ65 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.91□□□□□ -1.62
USB1Q9BQ65 Y_RNA.309-201ENST00000365046 111 ntBASIC4.91□□□□□ -1.62
USB1Q9BQ65 Y_RNA.521-201ENST00000384560 114 ntBASIC4.91□□□□□ -1.62
USB1Q9BQ65 MIR124-3-201ENST00000384866 87 ntBASIC4.91□□□□□ -1.62
USB1Q9BQ65 MT-TT-201ENST00000387460 66 ntBASIC4.91□□□□□ -1.62
USB1Q9BQ65 RNU6-588P-201ENST00000410281 105 ntBASIC4.91□□□□□ -1.62
USB1Q9BQ65 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.91□□□□□ -1.62
USB1Q9BQ65 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.91□□□□□ -1.62
USB1Q9BQ65 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.91□□□□□ -1.62
USB1Q9BQ65 RPL12P39-201ENST00000455456 496 ntBASIC4.91□□□□□ -1.62
USB1Q9BQ65 SNORD125-201ENST00000459538 96 ntBASIC4.91□□□□□ -1.62
USB1Q9BQ65 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.91□□□□□ -1.62
USB1Q9BQ65 RN7SL447P-201ENST00000494711 245 ntBASIC4.91□□□□□ -1.62
USB1Q9BQ65 RNU6-1282P-201ENST00000516735 96 ntBASIC4.91□□□□□ -1.62
USB1Q9BQ65 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.91□□□□□ -1.62
USB1Q9BQ65 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.91□□□□□ -1.62
USB1Q9BQ65 CYP4A27P-201ENST00000567218 190 ntBASIC4.91□□□□□ -1.62
USB1Q9BQ65 AL023881.1-201ENST00000621088 301 ntBASIC4.91□□□□□ -1.62
USB1Q9BQ65 AC132068.1-201ENST00000623805 459 ntBASIC4.91□□□□□ -1.62
USB1Q9BQ65 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.91□□□□□ -1.62
USB1Q9BQ65 AC074101.1-201ENST00000637861 241 ntBASIC4.91□□□□□ -1.62
USB1Q9BQ65 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
USB1Q9BQ65 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
USB1Q9BQ65 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
USB1Q9BQ65 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
USB1Q9BQ65 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
USB1Q9BQ65 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
USB1Q9BQ65 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
USB1Q9BQ65 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.91□□□□□ -1.62
USB1Q9BQ65 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
USB1Q9BQ65 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.91□□□□□ -1.62
USB1Q9BQ65 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
USB1Q9BQ65 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.9□□□□□ -1.62
USB1Q9BQ65 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.9□□□□□ -1.62
USB1Q9BQ65 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.9□□□□□ -1.62
USB1Q9BQ65 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
USB1Q9BQ65 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
USB1Q9BQ65 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.9□□□□□ -1.62
USB1Q9BQ65 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
USB1Q9BQ65 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
USB1Q9BQ65 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.62
USB1Q9BQ65 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
USB1Q9BQ65 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.9□□□□□ -1.62
USB1Q9BQ65 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
USB1Q9BQ65 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.9□□□□□ -1.62
USB1Q9BQ65 RNU6-884P-201ENST00000363889 107 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms