Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AL049545.1-201ENST00000401856 572 ntBASIC1.96□□□□□ -2.1
FOXC2Q99958 RNU6-1140P-201ENST00000410517 106 ntBASIC1.96□□□□□ -2.1
FOXC2Q99958 CYCSP48-201ENST00000417124 323 ntBASIC1.96□□□□□ -2.1
FOXC2Q99958 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.96□□□□□ -2.1
FOXC2Q99958 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.96□□□□□ -2.1
FOXC2Q99958 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.96□□□□□ -2.1
FOXC2Q99958 RPS3AP44-201ENST00000425466 790 ntBASIC1.96□□□□□ -2.1
FOXC2Q99958 RPL30P4-201ENST00000429309 333 ntBASIC1.96□□□□□ -2.1
FOXC2Q99958 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
FOXC2Q99958 AL445567.1-201ENST00000439121 144 ntBASIC1.96□□□□□ -2.1
FOXC2Q99958 AL512286.1-201ENST00000439244 400 ntBASIC1.96□□□□□ -2.1
FOXC2Q99958 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.96□□□□□ -2.1
FOXC2Q99958 ART2BP-201ENST00000453501 499 ntBASIC1.96□□□□□ -2.1
FOXC2Q99958 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.96□□□□□ -2.1
FOXC2Q99958 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.96□□□□□ -2.1
FOXC2Q99958 RPL30P6-201ENST00000475925 342 ntBASIC1.96□□□□□ -2.1
FOXC2Q99958 AC072039.1-201ENST00000477611 581 ntBASIC1.96□□□□□ -2.1
FOXC2Q99958 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.96□□□□□ -2.1
FOXC2Q99958 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.96□□□□□ -2.1
FOXC2Q99958 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.96□□□□□ -2.1
FOXC2Q99958 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.96□□□□□ -2.1
FOXC2Q99958 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
FOXC2Q99958 DEFB108A-201ENST00000530110 222 ntBASIC1.96□□□□□ -2.1
FOXC2Q99958 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
FOXC2Q99958 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
FOXC2Q99958 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.96□□□□□ -2.1
FOXC2Q99958 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.96□□□□□ -2.1
FOXC2Q99958 AC009127.3-201ENST00000570531 403 ntBASIC1.96□□□□□ -2.1
FOXC2Q99958 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.96□□□□□ -2.1
FOXC2Q99958 BNIP3P23-201ENST00000599655 511 ntBASIC1.96□□□□□ -2.1
FOXC2Q99958 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.96□□□□□ -2.1
FOXC2Q99958 AC009318.2-201ENST00000610917 651 ntBASIC1.96□□□□□ -2.1
FOXC2Q99958 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.96□□□□□ -2.1
FOXC2Q99958 MIR7844-201ENST00000616161 122 ntBASIC1.96□□□□□ -2.1
FOXC2Q99958 AC104010.1-201ENST00000616889 150 ntBASIC1.96□□□□□ -2.1
FOXC2Q99958 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
FOXC2Q99958 AC120349.3-201ENST00000624377 529 ntBASIC1.96□□□□□ -2.1
FOXC2Q99958 AL136313.1-201ENST00000624804 202 ntBASIC1.96□□□□□ -2.1
FOXC2Q99958 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
FOXC2Q99958 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
FOXC2Q99958 AL109809.4-201ENST00000603520 2185 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
FOXC2Q99958 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
FOXC2Q99958 AL359854.1-201ENST00000614203 1594 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
FOXC2Q99958 AL139276.1-201ENST00000311910 1001 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
FOXC2Q99958 Y_RNA.46-201ENST00000362695 102 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 RNU6-553P-201ENST00000364047 96 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 RNU6-658P-201ENST00000384606 106 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 SNORA41-201ENST00000384675 132 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 RNU6-19P-201ENST00000384718 107 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
FOXC2Q99958 RNA5SP210-201ENST00000391034 120 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 SNORD115.1-201ENST00000391109 76 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 RN7SKP32-201ENST00000410167 303 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.95□□□□□ -2.1
FOXC2Q99958 USP9YP6-201ENST00000413550 854 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.95□□□□□ -2.1
FOXC2Q99958 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.95□□□□□ -2.1
FOXC2Q99958 RPS27AP14-201ENST00000422868 454 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 AL365203.2-201ENST00000423444 196 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 MTND4P20-201ENST00000424125 869 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.95□□□□□ -2.1
FOXC2Q99958 AL592045.1-201ENST00000429867 352 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 HMGB1P27-201ENST00000431429 603 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.95□□□□□ -2.1
FOXC2Q99958 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.95□□□□□ -2.1
FOXC2Q99958 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.95□□□□□ -2.1
FOXC2Q99958 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.95□□□□□ -2.1
FOXC2Q99958 AL133217.1-201ENST00000450980 425 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 CACYBPP2-201ENST00000453625 678 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.95□□□□□ -2.1
FOXC2Q99958 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.95□□□□□ -2.1
FOXC2Q99958 RPL23AP41-201ENST00000484754 458 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 AC139453.3-201ENST00000493276 369 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 RPS27P27-201ENST00000498779 255 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 MTND4P2-201ENST00000507767 1203 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.95□□□□□ -2.1
FOXC2Q99958 RNU6-201P-201ENST00000517100 61 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.95□□□□□ -2.1
FOXC2Q99958 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.95□□□□□ -2.1
FOXC2Q99958 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.95□□□□□ -2.1
FOXC2Q99958 AL121821.2-201ENST00000556081 394 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
FOXC2Q99958 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.95□□□□□ -2.1
FOXC2Q99958 WISP1-OT1-201ENST00000602893 642 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 MTCYBP22-201ENST00000603788 447 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 SNORD14A-201ENST00000606526 91 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 AC091965.4-201ENST00000607691 587 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.95□□□□□ -2.1
FOXC2Q99958 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.95□□□□□ -2.1
FOXC2Q99958 AC024581.2-201ENST00000619986 252 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 AC019226.2-201ENST00000625973 424 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 AC025048.6-202ENST00000627667 438 ntBASIC1.95□□□□□ -2.1
FOXC2Q99958 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.95□□□□□ -2.1
FOXC2Q99958 SNORA3A-201ENST00000364113 130 ntBASIC1.94□□□□□ -2.1
FOXC2Q99958 RNU6-188P-201ENST00000364207 107 ntBASIC1.94□□□□□ -2.1
FOXC2Q99958 RNA5SP125-201ENST00000364843 120 ntBASIC1.94□□□□□ -2.1
FOXC2Q99958 U8.13-201ENST00000390842 128 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms