Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.46□□□□□ -2.02
LITAFQ99732 MIR2276-201ENST00000516886 89 ntBASIC2.46□□□□□ -2.02
LITAFQ99732 RN7SKP295-201ENST00000517264 153 ntBASIC2.46□□□□□ -2.02
LITAFQ99732 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.46□□□□□ -2.02
LITAFQ99732 AC068657.1-201ENST00000520807 306 ntBASIC2.46□□□□□ -2.02
LITAFQ99732 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LITAFQ99732 IGKV2OR2-8-201ENST00000558710 300 ntBASIC2.46□□□□□ -2.02
LITAFQ99732 CPDP1-201ENST00000579660 283 ntBASIC2.46□□□□□ -2.02
LITAFQ99732 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC2.46□□□□□ -2.02
LITAFQ99732 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC2.46□□□□□ -2.02
LITAFQ99732 AC008121.1-201ENST00000603244 268 ntBASIC2.46□□□□□ -2.02
LITAFQ99732 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.46□□□□□ -2.02
LITAFQ99732 AC027309.3-201ENST00000623419 351 ntBASIC2.46□□□□□ -2.02
LITAFQ99732 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.46□□□□□ -2.02
LITAFQ99732 U2.21-201ENST00000637295 81 ntBASIC2.46□□□□□ -2.02
LITAFQ99732 U6.99-201ENST00000637524 83 ntBASIC2.46□□□□□ -2.02
LITAFQ99732 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LITAFQ99732 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC2.46□□□□□ -2.02
LITAFQ99732 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LITAFQ99732 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.46□□□□□ -2.02
LITAFQ99732 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LITAFQ99732 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LITAFQ99732 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LITAFQ99732 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LITAFQ99732 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LITAFQ99732 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LITAFQ99732 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LITAFQ99732 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LITAFQ99732 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.46□□□□□ -2.02
LITAFQ99732 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
LITAFQ99732 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LITAFQ99732 AC093908.1-201ENST00000623125 8092 ntBASIC2.45□□□□□ -2.02
LITAFQ99732 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
LITAFQ99732 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LITAFQ99732 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LITAFQ99732 RNU6-596P-201ENST00000365395 98 ntBASIC2.45□□□□□ -2.02
LITAFQ99732 RNU6-827P-201ENST00000365553 106 ntBASIC2.45□□□□□ -2.02
LITAFQ99732 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC2.45□□□□□ -2.02
LITAFQ99732 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC2.45□□□□□ -2.02
LITAFQ99732 RNU6-639P-201ENST00000384074 107 ntBASIC2.45□□□□□ -2.02
LITAFQ99732 U1.1-201ENST00000384101 164 ntBASIC2.45□□□□□ -2.02
LITAFQ99732 RNU6-1106P-201ENST00000390845 107 ntBASIC2.45□□□□□ -2.02
LITAFQ99732 MIR1282-201ENST00000408865 101 ntBASIC2.45□□□□□ -2.02
LITAFQ99732 RNU2-37P-201ENST00000410695 177 ntBASIC2.45□□□□□ -2.02
LITAFQ99732 AC017079.2-201ENST00000416102 485 ntBASIC2.45□□□□□ -2.02
LITAFQ99732 AC243428.1-201ENST00000421099 264 ntBASIC2.45□□□□□ -2.02
LITAFQ99732 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.45□□□□□ -2.02
LITAFQ99732 AC006946.1-201ENST00000429106 328 ntBASIC2.45□□□□□ -2.02
LITAFQ99732 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.45□□□□□ -2.02
LITAFQ99732 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.45□□□□□ -2.02
LITAFQ99732 DAP3P1-201ENST00000441522 278 ntBASIC2.45□□□□□ -2.02
LITAFQ99732 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.45□□□□□ -2.02
LITAFQ99732 snoU109.2-201ENST00000459316 135 ntBASIC2.45□□□□□ -2.02
LITAFQ99732 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.45□□□□□ -2.02
LITAFQ99732 RNU6-120P-201ENST00000516077 103 ntBASIC2.45□□□□□ -2.02
LITAFQ99732 RNU1-103P-201ENST00000516502 125 ntBASIC2.45□□□□□ -2.02
LITAFQ99732 RNU6-307P-201ENST00000516743 106 ntBASIC2.45□□□□□ -2.02
LITAFQ99732 AC093331.1-201ENST00000521474 169 ntBASIC2.45□□□□□ -2.02
LITAFQ99732 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LITAFQ99732 H3F3AP1-201ENST00000559984 334 ntBASIC2.45□□□□□ -2.02
LITAFQ99732 CYCSP39-201ENST00000565821 309 ntBASIC2.45□□□□□ -2.02
LITAFQ99732 AC109446.1-201ENST00000566172 220 ntBASIC2.45□□□□□ -2.02
LITAFQ99732 MIR4782-201ENST00000577987 79 ntBASIC2.45□□□□□ -2.02
LITAFQ99732 MIR5010-201ENST00000582846 120 ntBASIC2.45□□□□□ -2.02
LITAFQ99732 AC005899.2-201ENST00000584353 90 ntBASIC2.45□□□□□ -2.02
LITAFQ99732 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.45□□□□□ -2.02
LITAFQ99732 AL161629.2-201ENST00000615347 275 ntBASIC2.45□□□□□ -2.02
LITAFQ99732 AC048347.1-201ENST00000624621 427 ntBASIC2.45□□□□□ -2.02
LITAFQ99732 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC2.45□□□□□ -2.02
LITAFQ99732 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
LITAFQ99732 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.45□□□□□ -2.02
LITAFQ99732 AC022336.2-201ENST00000568966 2538 ntBASIC2.45□□□□□ -2.02
LITAFQ99732 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LITAFQ99732 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LITAFQ99732 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
LITAFQ99732 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
LITAFQ99732 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
LITAFQ99732 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.45□□□□□ -2.02
LITAFQ99732 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.45□□□□□ -2.02
LITAFQ99732 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.45□□□□□ -2.02
LITAFQ99732 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LITAFQ99732 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
LITAFQ99732 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC2.44□□□□□ -2.02
LITAFQ99732 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.44□□□□□ -2.02
LITAFQ99732 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
LITAFQ99732 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
LITAFQ99732 RPL9P7-201ENST00000330965 580 ntBASIC2.44□□□□□ -2.02
LITAFQ99732 RNU6-490P-201ENST00000362985 107 ntBASIC2.44□□□□□ -2.02
LITAFQ99732 RNU6-778P-201ENST00000363269 103 ntBASIC2.44□□□□□ -2.02
LITAFQ99732 Y_RNA.148-201ENST00000363557 117 ntBASIC2.44□□□□□ -2.02
LITAFQ99732 RN7SKP227-201ENST00000364445 330 ntBASIC2.44□□□□□ -2.02
LITAFQ99732 Y_RNA.252-201ENST00000364556 101 ntBASIC2.44□□□□□ -2.02
LITAFQ99732 RNU6-1317P-201ENST00000364582 104 ntBASIC2.44□□□□□ -2.02
LITAFQ99732 SNORA41-201ENST00000384675 132 ntBASIC2.44□□□□□ -2.02
LITAFQ99732 RPL21P17-201ENST00000397467 475 ntBASIC2.44□□□□□ -2.02
LITAFQ99732 RNU6-174P-201ENST00000410406 106 ntBASIC2.44□□□□□ -2.02
LITAFQ99732 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC2.44□□□□□ -2.02
LITAFQ99732 AC016397.1-201ENST00000412463 242 ntBASIC2.44□□□□□ -2.02
LITAFQ99732 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.44□□□□□ -2.02
LITAFQ99732 AC011933.1-201ENST00000413334 321 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms