Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM47Q96LD4 POLR2KP2-201ENST00000438155 177 ntBASIC5.35□□□□□ -1.55
TRIM47Q96LD4 PHBP16-201ENST00000446318 950 ntBASIC5.35□□□□□ -1.55
TRIM47Q96LD4 AL162389.1-201ENST00000449233 177 ntBASIC5.35□□□□□ -1.55
TRIM47Q96LD4 RPL31P61-201ENST00000496160 376 ntBASIC5.35□□□□□ -1.55
TRIM47Q96LD4 RN7SKP46-201ENST00000515942 234 ntBASIC5.35□□□□□ -1.55
TRIM47Q96LD4 RNA5SP315-201ENST00000516340 116 ntBASIC5.35□□□□□ -1.55
TRIM47Q96LD4 RNA5SP312-201ENST00000517068 116 ntBASIC5.35□□□□□ -1.55
TRIM47Q96LD4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM47Q96LD4 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.35□□□□□ -1.55
TRIM47Q96LD4 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM47Q96LD4 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
TRIM47Q96LD4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM47Q96LD4 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM47Q96LD4 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM47Q96LD4 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM47Q96LD4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM47Q96LD4 AC010329.2-201ENST00000595195 2737 ntBASIC5.34□□□□□ -1.55
TRIM47Q96LD4 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM47Q96LD4 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM47Q96LD4 BTBD10P1-201ENST00000549824 1352 ntBASIC5.34□□□□□ -1.55
TRIM47Q96LD4 AL365440.1-201ENST00000436135 2167 ntBASIC5.34□□□□□ -1.55
TRIM47Q96LD4 RNU6-199P-201ENST00000362954 107 ntBASIC5.34□□□□□ -1.55
TRIM47Q96LD4 U3.6-201ENST00000363622 211 ntBASIC5.34□□□□□ -1.55
TRIM47Q96LD4 RNU6-275P-201ENST00000364910 107 ntBASIC5.34□□□□□ -1.55
TRIM47Q96LD4 RNU6-76P-201ENST00000384060 104 ntBASIC5.34□□□□□ -1.55
TRIM47Q96LD4 RNU1-13P-201ENST00000384499 162 ntBASIC5.34□□□□□ -1.55
TRIM47Q96LD4 RNU6-14P-201ENST00000384630 106 ntBASIC5.34□□□□□ -1.55
TRIM47Q96LD4 Z98745.1-201ENST00000402553 494 ntBASIC5.34□□□□□ -1.55
TRIM47Q96LD4 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM47Q96LD4 AC011998.1-201ENST00000433403 117 ntBASIC5.34□□□□□ -1.55
TRIM47Q96LD4 CEACAMP1-201ENST00000434624 1035 ntBASIC5.34□□□□□ -1.55
TRIM47Q96LD4 AC127537.2-201ENST00000439258 465 ntBASIC5.34□□□□□ -1.55
TRIM47Q96LD4 MRPL48P1-201ENST00000445390 636 ntBASIC5.34□□□□□ -1.55
TRIM47Q96LD4 TOMM22P6-201ENST00000465035 409 ntBASIC5.34□□□□□ -1.55
TRIM47Q96LD4 AC105137.1-201ENST00000484355 562 ntBASIC5.34□□□□□ -1.55
TRIM47Q96LD4 AP003327.1-201ENST00000529684 127 ntBASIC5.34□□□□□ -1.55
TRIM47Q96LD4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM47Q96LD4 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM47Q96LD4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM47Q96LD4 BPIFA4P-203ENST00000603168 689 ntBASIC5.34□□□□□ -1.55
TRIM47Q96LD4 CR392039.4-201ENST00000624968 501 ntBASIC5.34□□□□□ -1.55
TRIM47Q96LD4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM47Q96LD4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM47Q96LD4 AL031119.1-201ENST00000404707 1879 ntBASIC5.34□□□□□ -1.55
TRIM47Q96LD4 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.34□□□□□ -1.56
TRIM47Q96LD4 AC006971.1-201ENST00000407916 4486 ntBASIC5.34□□□□□ -1.56
TRIM47Q96LD4 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM47Q96LD4 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM47Q96LD4 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM47Q96LD4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM47Q96LD4 AC009812.4-201ENST00000569134 1805 ntBASIC5.33□□□□□ -1.56
TRIM47Q96LD4 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM47Q96LD4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM47Q96LD4 RNU6-222P-201ENST00000362438 107 ntBASIC5.33□□□□□ -1.56
TRIM47Q96LD4 RNU6-512P-201ENST00000364438 103 ntBASIC5.33□□□□□ -1.56
TRIM47Q96LD4 Y_RNA.388-201ENST00000383919 113 ntBASIC5.33□□□□□ -1.56
TRIM47Q96LD4 SNORA26.2-201ENST00000390922 122 ntBASIC5.33□□□□□ -1.56
TRIM47Q96LD4 RNY4P29-201ENST00000410801 97 ntBASIC5.33□□□□□ -1.56
TRIM47Q96LD4 RPS15AP40-201ENST00000419621 391 ntBASIC5.33□□□□□ -1.56
TRIM47Q96LD4 AC063976.4-201ENST00000421971 163 ntBASIC5.33□□□□□ -1.56
TRIM47Q96LD4 AL138785.1-201ENST00000425821 331 ntBASIC5.33□□□□□ -1.56
TRIM47Q96LD4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM47Q96LD4 AC010655.1-201ENST00000449336 292 ntBASIC5.33□□□□□ -1.56
TRIM47Q96LD4 RNU6-390P-201ENST00000516259 103 ntBASIC5.33□□□□□ -1.56
TRIM47Q96LD4 SNORA67.7-201ENST00000516664 135 ntBASIC5.33□□□□□ -1.56
TRIM47Q96LD4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM47Q96LD4 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM47Q96LD4 AC023043.3-201ENST00000593113 385 ntBASIC5.33□□□□□ -1.56
TRIM47Q96LD4 AL591034.3-201ENST00000605511 685 ntBASIC5.33□□□□□ -1.56
TRIM47Q96LD4 snoZ196.1-201ENST00000625269 89 ntBASIC5.33□□□□□ -1.56
TRIM47Q96LD4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM47Q96LD4 AC139713.2-215ENST00000641428 5037 ntBASIC5.33□□□□□ -1.56
TRIM47Q96LD4 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
TRIM47Q96LD4 ZFRP1-201ENST00000457579 2970 ntBASIC5.33□□□□□ -1.56
TRIM47Q96LD4 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM47Q96LD4 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM47Q96LD4 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM47Q96LD4 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM47Q96LD4 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM47Q96LD4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM47Q96LD4 DHX9P1-201ENST00000436565 3076 ntBASIC5.32□□□□□ -1.56
TRIM47Q96LD4 AC107027.3-201ENST00000565095 3473 ntBASIC5.32□□□□□ -1.56
TRIM47Q96LD4 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM47Q96LD4 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
TRIM47Q96LD4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM47Q96LD4 RNU6-263P-201ENST00000363811 107 ntBASIC5.32□□□□□ -1.56
TRIM47Q96LD4 RNU4-17P-201ENST00000365598 141 ntBASIC5.32□□□□□ -1.56
TRIM47Q96LD4 Y_RNA.495-201ENST00000384435 112 ntBASIC5.32□□□□□ -1.56
TRIM47Q96LD4 RNU11-4P-201ENST00000391149 133 ntBASIC5.32□□□□□ -1.56
TRIM47Q96LD4 WARS2P1-201ENST00000429678 537 ntBASIC5.32□□□□□ -1.56
TRIM47Q96LD4 Z82188.1-201ENST00000436709 154 ntBASIC5.32□□□□□ -1.56
TRIM47Q96LD4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM47Q96LD4 AC108751.2-201ENST00000469993 231 ntBASIC5.32□□□□□ -1.56
TRIM47Q96LD4 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM47Q96LD4 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM47Q96LD4 AP003730.1-201ENST00000524605 285 ntBASIC5.32□□□□□ -1.56
TRIM47Q96LD4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC5.32□□□□□ -1.56
TRIM47Q96LD4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM47Q96LD4 RN7SL176P-201ENST00000580352 264 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 155.6 ms