Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 OR4H12P-201ENST00000556269 907 ntBASIC4.79□□□□□ -1.64
TRIM11Q96F44 AL355812.1-201ENST00000603215 216 ntBASIC4.79□□□□□ -1.64
TRIM11Q96F44 AC084757.4-201ENST00000616350 526 ntBASIC4.79□□□□□ -1.64
TRIM11Q96F44 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM11Q96F44 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM11Q96F44 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM11Q96F44 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM11Q96F44 U3.6-201ENST00000363622 211 ntBASIC4.78□□□□□ -1.64
TRIM11Q96F44 RNA5SP87-201ENST00000384155 118 ntBASIC4.78□□□□□ -1.64
TRIM11Q96F44 CYB5AP4-201ENST00000396692 399 ntBASIC4.78□□□□□ -1.64
TRIM11Q96F44 SNORA74C-2-201ENST00000411179 201 ntBASIC4.78□□□□□ -1.64
TRIM11Q96F44 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM11Q96F44 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM11Q96F44 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM11Q96F44 RPS15AP34-201ENST00000487776 387 ntBASIC4.78□□□□□ -1.64
TRIM11Q96F44 AC091959.1-201ENST00000495857 238 ntBASIC4.78□□□□□ -1.64
TRIM11Q96F44 AC090281.1-201ENST00000523019 276 ntBASIC4.78□□□□□ -1.64
TRIM11Q96F44 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM11Q96F44 AC233702.2-202ENST00000562547 291 ntBASIC4.78□□□□□ -1.64
TRIM11Q96F44 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM11Q96F44 MIR4275-201ENST00000636486 87 ntBASIC4.78□□□□□ -1.64
TRIM11Q96F44 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
TRIM11Q96F44 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TRIM11Q96F44 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM11Q96F44 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM11Q96F44 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM11Q96F44 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM11Q96F44 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM11Q96F44 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM11Q96F44 OR4G2P-202ENST00000641004 1759 ntBASIC4.78□□□□□ -1.64
TRIM11Q96F44 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
TRIM11Q96F44 AL356489.2-201ENST00000566968 3528 ntBASIC4.77□□□□□ -1.65
TRIM11Q96F44 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TRIM11Q96F44 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM11Q96F44 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM11Q96F44 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM11Q96F44 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM11Q96F44 AC021146.4-201ENST00000309229 279 ntBASIC4.77□□□□□ -1.65
TRIM11Q96F44 RNA5SP307-201ENST00000362863 116 ntBASIC4.77□□□□□ -1.65
TRIM11Q96F44 RN7SKP227-201ENST00000364445 330 ntBASIC4.77□□□□□ -1.65
TRIM11Q96F44 Y_RNA.262-201ENST00000364641 102 ntBASIC4.77□□□□□ -1.65
TRIM11Q96F44 RNU6-827P-201ENST00000365553 106 ntBASIC4.77□□□□□ -1.65
TRIM11Q96F44 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
TRIM11Q96F44 RNU6-21P-201ENST00000384710 107 ntBASIC4.77□□□□□ -1.65
TRIM11Q96F44 RNA5SP397-201ENST00000391323 118 ntBASIC4.77□□□□□ -1.65
TRIM11Q96F44 LAP3P1-201ENST00000403648 294 ntBASIC4.77□□□□□ -1.65
TRIM11Q96F44 RNU4-30P-201ENST00000410245 143 ntBASIC4.77□□□□□ -1.65
TRIM11Q96F44 RN7SKP216-201ENST00000411050 312 ntBASIC4.77□□□□□ -1.65
TRIM11Q96F44 RNU5A-5P-201ENST00000411054 116 ntBASIC4.77□□□□□ -1.65
TRIM11Q96F44 RPS12P10-201ENST00000427031 377 ntBASIC4.77□□□□□ -1.65
TRIM11Q96F44 AC008065.1-201ENST00000428525 348 ntBASIC4.77□□□□□ -1.65
TRIM11Q96F44 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM11Q96F44 HIGD1AP2-201ENST00000446367 280 ntBASIC4.77□□□□□ -1.65
TRIM11Q96F44 AC012671.1-201ENST00000451912 203 ntBASIC4.77□□□□□ -1.65
TRIM11Q96F44 AC018638.3-201ENST00000461273 132 ntBASIC4.77□□□□□ -1.65
TRIM11Q96F44 AL160314.1-201ENST00000490836 438 ntBASIC4.77□□□□□ -1.65
TRIM11Q96F44 SNORD116-25-201ENST00000516517 92 ntBASIC4.77□□□□□ -1.65
TRIM11Q96F44 AC211433.2-201ENST00000608433 387 ntBASIC4.77□□□□□ -1.65
TRIM11Q96F44 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.77□□□□□ -1.65
TRIM11Q96F44 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM11Q96F44 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM11Q96F44 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.77□□□□□ -1.65
TRIM11Q96F44 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
TRIM11Q96F44 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM11Q96F44 RAD17P1-201ENST00000418130 2042 ntBASIC4.77□□□□□ -1.65
TRIM11Q96F44 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM11Q96F44 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM11Q96F44 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.76□□□□□ -1.65
TRIM11Q96F44 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.76□□□□□ -1.65
TRIM11Q96F44 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.76□□□□□ -1.65
TRIM11Q96F44 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
TRIM11Q96F44 AC233981.2-201ENST00000611524 1614 ntBASIC4.76□□□□□ -1.65
TRIM11Q96F44 RNU6-37P-201ENST00000362692 107 ntBASIC4.76□□□□□ -1.65
TRIM11Q96F44 RNU6-11P-201ENST00000364234 107 ntBASIC4.76□□□□□ -1.65
TRIM11Q96F44 RNU6-7-201ENST00000364784 107 ntBASIC4.76□□□□□ -1.65
TRIM11Q96F44 RNU6-8-201ENST00000365467 107 ntBASIC4.76□□□□□ -1.65
TRIM11Q96F44 RNU6-25P-201ENST00000383873 107 ntBASIC4.76□□□□□ -1.65
TRIM11Q96F44 RNU6-1-201ENST00000383898 107 ntBASIC4.76□□□□□ -1.65
TRIM11Q96F44 RNU6-36P-201ENST00000384172 107 ntBASIC4.76□□□□□ -1.65
TRIM11Q96F44 RNU6-4P-201ENST00000384205 107 ntBASIC4.76□□□□□ -1.65
TRIM11Q96F44 RNU6-5P-201ENST00000384238 107 ntBASIC4.76□□□□□ -1.65
TRIM11Q96F44 RNU6-3P-201ENST00000384314 107 ntBASIC4.76□□□□□ -1.65
TRIM11Q96F44 RNU6-16P-201ENST00000384385 107 ntBASIC4.76□□□□□ -1.65
TRIM11Q96F44 RNU6-15P-201ENST00000384534 107 ntBASIC4.76□□□□□ -1.65
TRIM11Q96F44 RNU6-2-201ENST00000384627 107 ntBASIC4.76□□□□□ -1.65
TRIM11Q96F44 RNU6-29P-201ENST00000384637 107 ntBASIC4.76□□□□□ -1.65
TRIM11Q96F44 RNU6-9-201ENST00000384776 107 ntBASIC4.76□□□□□ -1.65
TRIM11Q96F44 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.76□□□□□ -1.65
TRIM11Q96F44 SNORA46.1-201ENST00000391069 153 ntBASIC4.76□□□□□ -1.65
TRIM11Q96F44 RNA5SP146-201ENST00000410743 123 ntBASIC4.76□□□□□ -1.65
TRIM11Q96F44 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM11Q96F44 SNORD56-201ENST00000413522 71 ntBASIC4.76□□□□□ -1.65
TRIM11Q96F44 RPS12P23-201ENST00000419579 400 ntBASIC4.76□□□□□ -1.65
TRIM11Q96F44 OOSP1P1-201ENST00000423265 274 ntBASIC4.76□□□□□ -1.65
TRIM11Q96F44 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.76□□□□□ -1.65
TRIM11Q96F44 AL162591.2-201ENST00000449634 317 ntBASIC4.76□□□□□ -1.65
TRIM11Q96F44 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM11Q96F44 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.76□□□□□ -1.65
TRIM11Q96F44 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM11Q96F44 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 358 ms