Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AC105224.1-201ENST00000587055 421 ntBASIC0.69□□□□□ -2.3
TTC28Q96AY4 MTRNR2L2-201ENST00000604882 87 ntBASIC0.69□□□□□ -2.3
TTC28Q96AY4 AC006001.4-201ENST00000622243 395 ntBASIC0.69□□□□□ -2.3
TTC28Q96AY4 Y_RNA.475-201ENST00000384345 101 ntBASIC0.69□□□□□ -2.3
TTC28Q96AY4 AL022238.1-201ENST00000442557 355 ntBASIC0.69□□□□□ -2.3
TTC28Q96AY4 MTCYBP3-201ENST00000445588 1137 ntBASIC0.69□□□□□ -2.3
TTC28Q96AY4 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
TTC28Q96AY4 RNU6-202P-201ENST00000515998 96 ntBASIC0.69□□□□□ -2.3
TTC28Q96AY4 IGLVI-20-201ENST00000519296 130 ntBASIC0.69□□□□□ -2.3
TTC28Q96AY4 AC022880.1-201ENST00000534017 973 ntBASIC0.69□□□□□ -2.3
TTC28Q96AY4 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC0.69□□□□□ -2.3
TTC28Q96AY4 AL133241.1-201ENST00000556832 487 ntBASIC0.69□□□□□ -2.3
TTC28Q96AY4 AC079610.2-201ENST00000604818 690 ntBASIC0.69□□□□□ -2.3
TTC28Q96AY4 AC135507.1-201ENST00000607214 561 ntBASIC0.69□□□□□ -2.3
TTC28Q96AY4 AP000238.1-201ENST00000608759 426 ntBASIC0.69□□□□□ -2.3
TTC28Q96AY4 AC103710.4-201ENST00000609301 899 ntBASIC0.69□□□□□ -2.3
TTC28Q96AY4 AC009090.3-201ENST00000616553 565 ntBASIC0.69□□□□□ -2.3
TTC28Q96AY4 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.69□□□□□ -2.3
TTC28Q96AY4 AC040168.1-201ENST00000623594 991 ntBASIC0.69□□□□□ -2.3
TTC28Q96AY4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.68□□□□□ -2.3
TTC28Q96AY4 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
TTC28Q96AY4 RNA5SP276-201ENST00000362580 94 ntBASIC0.68□□□□□ -2.3
TTC28Q96AY4 Y_RNA.505-201ENST00000384489 102 ntBASIC0.68□□□□□ -2.3
TTC28Q96AY4 RAB11AP1-201ENST00000442978 646 ntBASIC0.68□□□□□ -2.3
TTC28Q96AY4 AC092685.1-201ENST00000447960 1243 ntBASIC0.68□□□□□ -2.3
TTC28Q96AY4 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.68□□□□□ -2.3
TTC28Q96AY4 AC055731.1-201ENST00000474387 401 ntBASIC0.68□□□□□ -2.3
TTC28Q96AY4 AC138853.1-201ENST00000503549 823 ntBASIC0.68□□□□□ -2.3
TTC28Q96AY4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.68□□□□□ -2.3
TTC28Q96AY4 Y_RNA.659-201ENST00000515994 113 ntBASIC0.68□□□□□ -2.3
TTC28Q96AY4 AP004247.1-201ENST00000531556 1289 ntBASIC0.68□□□□□ -2.3
TTC28Q96AY4 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.68□□□□□ -2.3
TTC28Q96AY4 LSM6P2-201ENST00000552208 177 ntBASIC0.68□□□□□ -2.3
TTC28Q96AY4 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC0.68□□□□□ -2.3
TTC28Q96AY4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.68□□□□□ -2.3
TTC28Q96AY4 AC115989.2-201ENST00000578640 563 ntBASIC0.68□□□□□ -2.3
TTC28Q96AY4 OR1M4P-201ENST00000589199 287 ntBASIC0.68□□□□□ -2.3
TTC28Q96AY4 AL137246.1-201ENST00000607072 977 ntBASIC0.68□□□□□ -2.3
TTC28Q96AY4 AL159152.1-201ENST00000635019 2587 ntBASIC0.68□□□□□ -2.3
TTC28Q96AY4 AP000776.1-201ENST00000530032 1663 ntBASIC0.68□□□□□ -2.3
TTC28Q96AY4 AL158823.1-201ENST00000418441 478 ntBASIC0.67□□□□□ -2.3
TTC28Q96AY4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.67□□□□□ -2.3
TTC28Q96AY4 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.67□□□□□ -2.3
TTC28Q96AY4 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
TTC28Q96AY4 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.67□□□□□ -2.3
TTC28Q96AY4 RPL26P6-201ENST00000440913 438 ntBASIC0.67□□□□□ -2.3
TTC28Q96AY4 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.67□□□□□ -2.3
TTC28Q96AY4 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.67□□□□□ -2.3
TTC28Q96AY4 PNPLA4P1-201ENST00000458328 305 ntBASIC0.67□□□□□ -2.3
TTC28Q96AY4 AL049714.1-201ENST00000466686 347 ntBASIC0.67□□□□□ -2.3
TTC28Q96AY4 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.67□□□□□ -2.3
TTC28Q96AY4 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.67□□□□□ -2.3
TTC28Q96AY4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.67□□□□□ -2.3
TTC28Q96AY4 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.67□□□□□ -2.3
TTC28Q96AY4 Y_RNA.711-201ENST00000516993 102 ntBASIC0.67□□□□□ -2.3
TTC28Q96AY4 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.67□□□□□ -2.3
TTC28Q96AY4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.67□□□□□ -2.3
TTC28Q96AY4 AC008269.2-201ENST00000561915 1105 ntBASIC0.67□□□□□ -2.3
TTC28Q96AY4 AC068620.3-201ENST00000602749 560 ntBASIC0.67□□□□□ -2.3
TTC28Q96AY4 AC025165.5-201ENST00000602802 578 ntBASIC0.67□□□□□ -2.3
TTC28Q96AY4 AC018618.2-201ENST00000604770 446 ntBASIC0.67□□□□□ -2.3
TTC28Q96AY4 AC090132.2-201ENST00000615881 347 ntBASIC0.67□□□□□ -2.3
TTC28Q96AY4 AC109809.1-201ENST00000619665 545 ntBASIC0.67□□□□□ -2.3
TTC28Q96AY4 AC068787.1-201ENST00000623908 691 ntBASIC0.67□□□□□ -2.3
TTC28Q96AY4 AC119674.1-220ENST00000641502 1048 ntBASIC0.67□□□□□ -2.3
TTC28Q96AY4 AL022578.1-201ENST00000439330 1433 ntBASIC0.67□□□□□ -2.3
TTC28Q96AY4 Y_RNA.453-201ENST00000384223 109 ntBASIC0.67□□□□□ -2.3
TTC28Q96AY4 MIR525-201ENST00000384978 85 ntBASIC0.67□□□□□ -2.3
TTC28Q96AY4 U6atac.2-201ENST00000408644 118 ntBASIC0.67□□□□□ -2.3
TTC28Q96AY4 TRGVB-201ENST00000453257 471 ntBASIC0.67□□□□□ -2.3
TTC28Q96AY4 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.67□□□□□ -2.3
TTC28Q96AY4 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.67□□□□□ -2.3
TTC28Q96AY4 AF213884.2-201ENST00000510417 903 ntBASIC0.67□□□□□ -2.3
TTC28Q96AY4 RNU6-567P-201ENST00000516746 107 ntBASIC0.67□□□□□ -2.3
TTC28Q96AY4 RNU6-889P-201ENST00000517189 103 ntBASIC0.67□□□□□ -2.3
TTC28Q96AY4 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC0.67□□□□□ -2.3
TTC28Q96AY4 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
TTC28Q96AY4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC0.67□□□□□ -2.3
TTC28Q96AY4 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.67□□□□□ -2.3
TTC28Q96AY4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.67□□□□□ -2.3
TTC28Q96AY4 SUMO2P14-201ENST00000604488 293 ntBASIC0.67□□□□□ -2.3
TTC28Q96AY4 AL355297.2-201ENST00000604792 129 ntBASIC0.67□□□□□ -2.3
TTC28Q96AY4 SNORD14A-201ENST00000606526 91 ntBASIC0.67□□□□□ -2.3
TTC28Q96AY4 AL773524.1-201ENST00000614065 229 ntBASIC0.67□□□□□ -2.3
TTC28Q96AY4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.67□□□□□ -2.3
TTC28Q96AY4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.67□□□□□ -2.3
TTC28Q96AY4 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
TTC28Q96AY4 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
TTC28Q96AY4 RNU6-543P-201ENST00000362576 108 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.66□□□□□ -2.3
TTC28Q96AY4 RNU2-43P-201ENST00000410306 190 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 RPS20P15-201ENST00000412792 311 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 EDDM3CP-201ENST00000415977 425 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 SDAD1P3-201ENST00000427380 333 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.66□□□□□ -2.3
TTC28Q96AY4 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.66□□□□□ -2.3
TTC28Q96AY4 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.66□□□□□ -2.3
TTC28Q96AY4 MTND1P33-201ENST00000446251 917 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 ANKRD26P4-201ENST00000455755 950 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms