Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
BRF1Q92994 MFSD8-236ENST00000641509 4050 ntBASIC4.36□□□□□ -1.71
BRF1Q92994 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
BRF1Q92994 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
BRF1Q92994 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.36□□□□□ -1.71
BRF1Q92994 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
BRF1Q92994 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
BRF1Q92994 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.35□□□□□ -1.71
BRF1Q92994 AC073073.2-201ENST00000609827 2578 ntBASIC4.35□□□□□ -1.71
BRF1Q92994 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
BRF1Q92994 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.35□□□□□ -1.71
BRF1Q92994 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
BRF1Q92994 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
BRF1Q92994 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
BRF1Q92994 Y_RNA.33-201ENST00000362591 102 ntBASIC4.35□□□□□ -1.71
BRF1Q92994 RN7SKP280-201ENST00000364196 304 ntBASIC4.35□□□□□ -1.71
BRF1Q92994 RNU6-702P-201ENST00000364982 107 ntBASIC4.35□□□□□ -1.71
BRF1Q92994 U3.15-201ENST00000365398 212 ntBASIC4.35□□□□□ -1.71
BRF1Q92994 Y_RNA.574-201ENST00000384766 95 ntBASIC4.35□□□□□ -1.71
BRF1Q92994 RNU6-907P-201ENST00000390924 102 ntBASIC4.35□□□□□ -1.71
BRF1Q92994 RN7SKP156-201ENST00000410308 342 ntBASIC4.35□□□□□ -1.71
BRF1Q92994 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
BRF1Q92994 RAC1P3-201ENST00000416129 580 ntBASIC4.35□□□□□ -1.71
BRF1Q92994 AC091390.3-201ENST00000426478 338 ntBASIC4.35□□□□□ -1.71
BRF1Q92994 RPL7P2-201ENST00000427639 268 ntBASIC4.35□□□□□ -1.71
BRF1Q92994 AL356867.1-201ENST00000429623 299 ntBASIC4.35□□□□□ -1.71
BRF1Q92994 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.35□□□□□ -1.71
BRF1Q92994 AL133162.1-201ENST00000463228 453 ntBASIC4.35□□□□□ -1.71
BRF1Q92994 AC018437.1-201ENST00000492214 406 ntBASIC4.35□□□□□ -1.71
BRF1Q92994 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.35□□□□□ -1.71
BRF1Q92994 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.35□□□□□ -1.71
BRF1Q92994 MIR3668-201ENST00000582138 75 ntBASIC4.35□□□□□ -1.71
BRF1Q92994 VN1R85P-201ENST00000601587 426 ntBASIC4.35□□□□□ -1.71
BRF1Q92994 AL355810.1-201ENST00000614629 552 ntBASIC4.35□□□□□ -1.71
BRF1Q92994 SNORD39.4-201ENST00000620099 78 ntBASIC4.35□□□□□ -1.71
BRF1Q92994 AL606534.2-204ENST00000635008 178 ntBASIC4.35□□□□□ -1.71
BRF1Q92994 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
BRF1Q92994 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
BRF1Q92994 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
BRF1Q92994 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
BRF1Q92994 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
BRF1Q92994 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
BRF1Q92994 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
BRF1Q92994 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.34□□□□□ -1.71
BRF1Q92994 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
BRF1Q92994 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
BRF1Q92994 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
BRF1Q92994 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
BRF1Q92994 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
BRF1Q92994 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
BRF1Q92994 Y_RNA.39-201ENST00000362620 98 ntBASIC4.34□□□□□ -1.71
BRF1Q92994 RNU6-505P-201ENST00000384427 107 ntBASIC4.34□□□□□ -1.71
BRF1Q92994 Z85995.1-201ENST00000415547 335 ntBASIC4.34□□□□□ -1.71
BRF1Q92994 AL096701.2-201ENST00000416920 238 ntBASIC4.34□□□□□ -1.71
BRF1Q92994 AL158071.1-201ENST00000430315 461 ntBASIC4.34□□□□□ -1.71
BRF1Q92994 USP9YP7-201ENST00000436723 430 ntBASIC4.34□□□□□ -1.71
BRF1Q92994 HMGN2P21-201ENST00000447764 270 ntBASIC4.34□□□□□ -1.71
BRF1Q92994 USP9YP32-201ENST00000452432 430 ntBASIC4.34□□□□□ -1.71
BRF1Q92994 FABP5P15-201ENST00000453566 214 ntBASIC4.34□□□□□ -1.71
BRF1Q92994 RPL23AP31-201ENST00000456160 467 ntBASIC4.34□□□□□ -1.71
BRF1Q92994 AC112492.4-201ENST00000456549 352 ntBASIC4.34□□□□□ -1.71
BRF1Q92994 U8.20-201ENST00000459445 131 ntBASIC4.34□□□□□ -1.71
BRF1Q92994 RPL17P19-201ENST00000489069 552 ntBASIC4.34□□□□□ -1.71
BRF1Q92994 MTND4LP22-201ENST00000508209 276 ntBASIC4.34□□□□□ -1.71
BRF1Q92994 MRPS35P2-201ENST00000508242 191 ntBASIC4.34□□□□□ -1.71
BRF1Q92994 HMGN1P11-201ENST00000508668 303 ntBASIC4.34□□□□□ -1.71
BRF1Q92994 CPDP1-201ENST00000579660 283 ntBASIC4.34□□□□□ -1.71
BRF1Q92994 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.34□□□□□ -1.71
BRF1Q92994 AC244505.7-201ENST00000599675 272 ntBASIC4.34□□□□□ -1.71
BRF1Q92994 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.34□□□□□ -1.71
BRF1Q92994 SNORD58B-201ENST00000607313 66 ntBASIC4.34□□□□□ -1.71
BRF1Q92994 AC007792.1-201ENST00000623023 402 ntBASIC4.34□□□□□ -1.71
BRF1Q92994 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.34□□□□□ -1.71
BRF1Q92994 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.34□□□□□ -1.71
BRF1Q92994 AC244205.2-202ENST00000635781 342 ntBASIC4.34□□□□□ -1.71
BRF1Q92994 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
BRF1Q92994 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
BRF1Q92994 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
BRF1Q92994 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.34□□□□□ -1.72
BRF1Q92994 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BRF1Q92994 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.33□□□□□ -1.72
BRF1Q92994 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BRF1Q92994 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.33□□□□□ -1.72
BRF1Q92994 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.33□□□□□ -1.72
BRF1Q92994 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BRF1Q92994 AC066616.2-201ENST00000559334 1481 ntBASIC4.33□□□□□ -1.72
BRF1Q92994 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
BRF1Q92994 SET-203ENST00000372688 801 ntTSL 2 BASIC4.33□□□□□ -1.72
BRF1Q92994 Y_RNA.389-201ENST00000383924 113 ntBASIC4.33□□□□□ -1.72
BRF1Q92994 AL158156.1-201ENST00000422509 473 ntBASIC4.33□□□□□ -1.72
BRF1Q92994 MRPS18CP6-201ENST00000423587 223 ntBASIC4.33□□□□□ -1.72
BRF1Q92994 BX276092.3-201ENST00000424182 230 ntBASIC4.33□□□□□ -1.72
BRF1Q92994 RPL27AP8-201ENST00000424277 446 ntBASIC4.33□□□□□ -1.72
BRF1Q92994 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
BRF1Q92994 MYL8P-204ENST00000431574 518 ntBASIC4.33□□□□□ -1.72
BRF1Q92994 NDUFB1P2-201ENST00000449477 176 ntBASIC4.33□□□□□ -1.72
BRF1Q92994 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
BRF1Q92994 RPL9P32-201ENST00000464118 620 ntBASIC4.33□□□□□ -1.72
BRF1Q92994 RPL7P5-201ENST00000471472 736 ntBASIC4.33□□□□□ -1.72
BRF1Q92994 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms